{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,5]],"date-time":"2026-05-05T18:36:33Z","timestamp":1778006193972,"version":"3.51.4"},"reference-count":20,"publisher":"Oxford University Press (OUP)","issue":"suppl_1","license":[{"start":{"date-parts":[[2017,5,10]],"date-time":"2017-05-10T00:00:00Z","timestamp":1494374400000},"content-version":"vor","delay-in-days":2718,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/2.0\/uk\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2010,1]]},"DOI":"10.1093\/nar\/gkp1002","type":"journal-article","created":{"date-parts":[[2009,12,1]],"date-time":"2009-12-01T02:09:23Z","timestamp":1259633363000},"page":"D480-D487","source":"Crossref","is-referenced-by-count":324,"title":["SMPDB: The Small Molecule Pathway Database"],"prefix":"10.1093","volume":"38","author":[{"given":"Alex","family":"Frolkis","sequence":"first","affiliation":[]},{"given":"Craig","family":"Knox","sequence":"additional","affiliation":[]},{"given":"Emilia","family":"Lim","sequence":"additional","affiliation":[]},{"given":"Timothy","family":"Jewison","sequence":"additional","affiliation":[]},{"given":"Vivian","family":"Law","sequence":"additional","affiliation":[]},{"given":"David D.","family":"Hau","sequence":"additional","affiliation":[]},{"given":"Phillip","family":"Liu","sequence":"additional","affiliation":[]},{"given":"Bijaya","family":"Gautam","sequence":"additional","affiliation":[]},{"given":"Son","family":"Ly","sequence":"additional","affiliation":[]},{"given":"An Chi","family":"Guo","sequence":"additional","affiliation":[]},{"given":"Jianguo","family":"Xia","sequence":"additional","affiliation":[]},{"given":"Yongjie","family":"Liang","sequence":"additional","affiliation":[]},{"given":"Savita","family":"Shrivastava","sequence":"additional","affiliation":[]},{"given":"David S.","family":"Wishart","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2009,11,30]]},"reference":[{"key":"key\n\t\t\t\t20170408055718_B1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/S0303-2647(98)00019-7","article-title":"On representation of metabolic pathways","volume":"47","author":"Michal","year":"1998","journal-title":"Biosystems"},{"key":"key\n\t\t\t\t20170408055718_B2","volume-title":"Biochemical Pathways Wall Chart","author":"Michal","year":"1968"},{"key":"key\n\t\t\t\t20170408055718_B3","doi-asserted-by":"crossref","first-page":"343","DOI":"10.1146\/annurev.genom.2.1.343","article-title":"A new approach to decoding life: systems biology","volume":"2","author":"Ideker","year":"2001","journal-title":"Annu. Rev. Genomics Hum. Genet."},{"key":"key\n\t\t\t\t20170408055718_B4","doi-asserted-by":"crossref","first-page":"2651","DOI":"10.1093\/bioinformatics\/btm401","article-title":"Tools for visually exploring biological networks","volume":"23","author":"Suderman","year":"2007","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20170408055718_B5","doi-asserted-by":"crossref","first-page":"W423","DOI":"10.1093\/nar\/gkn282","article-title":"KEGG Atlas mapping for global analysis of metabolic pathways","volume":"36","author":"Okuda","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B6","doi-asserted-by":"crossref","first-page":"32","DOI":"10.1093\/nar\/24.1.32","article-title":"EcoCyc: an encyclopedia of Escherichia coli genes and metabolism","volume":"24","author":"Karp","year":"1996","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B7","doi-asserted-by":"crossref","first-page":"D623","DOI":"10.1093\/nar\/gkm900","article-title":"The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway\/Genome Databases","volume":"36","author":"Caspi","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B8","doi-asserted-by":"crossref","first-page":"D428","DOI":"10.1093\/nar\/gki072","article-title":"Reactome: a knowledgebase of biological pathways","volume":"33","author":"Joshi-Tope","year":"2005","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B9","doi-asserted-by":"crossref","first-page":"e184","DOI":"10.1371\/journal.pbio.0060184","article-title":"WikiPathways: pathway editing for the people","volume":"6","author":"Pico","year":"2008","journal-title":"PLoS Biol."},{"key":"key\n\t\t\t\t20170408055718_B10","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1038\/msb4100177","article-title":"The Edinburgh human metabolic network reconstruction and its functional analysis","volume":"3","author":"Ma","year":"2007","journal-title":"Mol. Syst. Biol."},{"key":"key\n\t\t\t\t20170408055718_B11","doi-asserted-by":"crossref","first-page":"539","DOI":"10.1080\/03602530802413338","article-title":"PharmGKB: understanding the effects of individual genetic variants","volume":"40","author":"Sangkuhl","year":"2008","journal-title":"Drug Metab. Rev."},{"key":"key\n\t\t\t\t20170408055718_B12","doi-asserted-by":"crossref","first-page":"164","DOI":"10.1016\/j.jchromb.2008.05.001","article-title":"The human cerebrospinal fluid metabolome","volume":"871","author":"Wishart","year":"2008","journal-title":"J. Chromatogr. B Analyt. Technol. Biomed. Life Sci."},{"key":"key\n\t\t\t\t20170408055718_B13","doi-asserted-by":"crossref","first-page":"307","DOI":"10.2165\/00126839-200809050-00002","article-title":"Applications of metabolomics in drug discovery and development","volume":"9","author":"Wishart","year":"2008","journal-title":"Drugs R D"},{"key":"key\n\t\t\t\t20170408055718_B14","doi-asserted-by":"crossref","first-page":"D668","DOI":"10.1093\/nar\/gkj067","article-title":"DrugBank: a comprehensive resource for in silico drug discovery and exploration","volume":"34","author":"Wishart","year":"2006","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B15","doi-asserted-by":"crossref","first-page":"D521","DOI":"10.1093\/nar\/gkl923","article-title":"HMDB: the Human Metabolome Database","volume":"35","author":"Wishart","year":"2007","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B16","doi-asserted-by":"crossref","first-page":"D169","DOI":"10.1093\/nar\/gkn664","article-title":"The Universal Protein Resource (UniProt) 2009","volume":"37","author":"UniProt Consortium","year":"2009","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B17","doi-asserted-by":"crossref","first-page":"D514","DOI":"10.1093\/nar\/gki033","article-title":"Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders","volume":"33","author":"Hamosh","year":"2005","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20170408055718_B18","doi-asserted-by":"crossref","first-page":"4401","DOI":"10.1093\/bioinformatics\/bti718","article-title":"Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX","volume":"21","author":"Str\u00f6mb\u00e4ck","year":"2005","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20170408055718_B19","first-page":"139","article-title":"Dynamic cellular automata: an alternative approach to cellular simulation","volume":"5","author":"Wishart","year":"2005","journal-title":"In Silico Biol."},{"key":"key\n\t\t\t\t20170408055718_B20","doi-asserted-by":"crossref","first-page":"79","DOI":"10.2147\/IJN.S4375","article-title":"Spatiotemporal integration of molecular and anatomical data in virtual reality using semantic mapping","volume":"4","author":"Soh","year":"2009","journal-title":"Int. J. Nanomed."}],"container-title":["Nucleic Acids Research"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/nar\/article-pdf\/38\/suppl_1\/D480\/11217425\/gkp1002.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,4,2]],"date-time":"2018-04-02T14:40:32Z","timestamp":1522680032000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/nar\/article-lookup\/doi\/10.1093\/nar\/gkp1002"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2009,11,30]]},"references-count":20,"journal-issue":{"issue":"suppl_1","published-online":{"date-parts":[[2009,11,30]]},"published-print":{"date-parts":[[2010,1]]}},"URL":"https:\/\/doi.org\/10.1093\/nar\/gkp1002","relation":{},"ISSN":["0305-1048","1362-4962"],"issn-type":[{"value":"0305-1048","type":"print"},{"value":"1362-4962","type":"electronic"}],"subject":[],"published":{"date-parts":[[2009,11,30]]}}}