{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,3]],"date-time":"2026-10-03T14:36:13Z","timestamp":1791038173749,"version":"4.1.0"},"reference-count":48,"publisher":"Oxford University Press (OUP)","issue":"D1","license":[{"start":{"date-parts":[[2016,10,4]],"date-time":"2016-10-04T00:00:00Z","timestamp":1475539200000},"content-version":"vor","delay-in-days":1411,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/3.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013,1,1]]},"DOI":"10.1093\/nar\/gks1138","type":"journal-article","created":{"date-parts":[[2012,11,24]],"date-time":"2012-11-24T21:01:08Z","timestamp":1353790868000},"page":"D977-D982","source":"Crossref","is-referenced-by-count":72,"title":["SomamiR: a database for somatic mutations impacting microRNA function in cancer"],"prefix":"10.1093","volume":"41","author":[{"given":"Anindya","family":"Bhattacharya","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jesse D.","family":"Ziebarth","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yan","family":"Cui","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2012,11,23]]},"reference":[{"key":"key\n\t\t\t\t20171013052205_gks1138-B1","doi-asserted-by":"crossref","first-page":"589","DOI":"10.1101\/gr.098046.109","article-title":"Reprogramming of miRNA networks in cancer and leukemia","volume":"20","author":"Volinia","year":"2010","journal-title":"Genome Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B2","doi-asserted-by":"crossref","first-page":"92","DOI":"10.1101\/gr.082701.108","article-title":"Most mammalian mRNAs are conserved targets of microRNAs","volume":"19","author":"Friedman","year":"2009","journal-title":"Genome Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B3","doi-asserted-by":"crossref","first-page":"259","DOI":"10.1038\/nrc1840","article-title":"Oncomirs - microRNAs with a role in cancer","volume":"6","author":"Esquela-Kerscher","year":"2006","journal-title":"Nat. Rev. Cancer"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B4","doi-asserted-by":"crossref","first-page":"2485","DOI":"10.4161\/cc.7.16.6453","article-title":"microRNAs and cancer: an overview","volume":"7","author":"Medina","year":"2008","journal-title":"Cell Cycle"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B5","doi-asserted-by":"crossref","first-page":"389","DOI":"10.1038\/nrc2867","article-title":"Genetic variation in microRNA networks: the implications for cancer research","volume":"10","author":"Ryan","year":"2010","journal-title":"Nat. Rev. Cancer"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B6","doi-asserted-by":"crossref","first-page":"489","DOI":"10.1016\/j.tig.2008.07.004","article-title":"MicroRNA target site polymorphisms and human disease","volume":"24","author":"Sethupathy","year":"2008","journal-title":"Trends Genet."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B7","doi-asserted-by":"crossref","first-page":"e46176","DOI":"10.1371\/journal.pone.0046176","article-title":"Systematic analysis of microRNA targeting impacted by small insertions and deletions in human genome","volume":"7","author":"Bhattacharya","year":"2012","journal-title":"PLoS One"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B8","doi-asserted-by":"crossref","first-page":"1172","DOI":"10.1016\/j.cell.2012.02.005","article-title":"MicroRNAs in stress signaling and human disease","volume":"148","author":"Mendell","year":"2012","journal-title":"Cell"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B9","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1001\/jama.2010.1919","article-title":"Association of a microRNA\/TP53 feedback circuitry with pathogenesis and outcome of B-cell chronic lymphocytic leukemia","volume":"305","author":"Fabbri","year":"2011","journal-title":"JAMA"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B10","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1001\/jama.2010.1940","article-title":"Unraveling the molecular pathogenesis of chronic lymphocytic leukemia: dissecting a microRNA regulatory network","volume":"305","author":"Allendorf","year":"2011","journal-title":"JAMA"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B11","doi-asserted-by":"crossref","first-page":"8535","DOI":"10.1158\/0008-5472.CAN-08-2129","article-title":"A SNP in a let-7 microRNA complementary site in the KRAS 3\u2032-untranslated region increases non-small cell lung cancer risk","volume":"68","author":"Chin","year":"2008","journal-title":"Cancer Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B12","doi-asserted-by":"crossref","first-page":"6509","DOI":"10.1158\/0008-5472.CAN-10-0689","article-title":"A KRAS-variant in ovarian cancer acts as a genetic marker of cancer risk","volume":"70","author":"Ratner","year":"2010","journal-title":"Cancer Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B13","doi-asserted-by":"crossref","first-page":"1003","DOI":"10.1093\/carcin\/bgp099","article-title":"A let-7 microRNA-binding site polymorphism in the KRAS 3\u2032-UTR is associated with reduced survival in oral cancers","volume":"30","author":"Christensen","year":"2009","journal-title":"Carcinogenesis"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B14","doi-asserted-by":"crossref","first-page":"377","DOI":"10.1016\/S1470-2045(11)70044-4","article-title":"A 3\u2032-untranslated region KRAS variant and triple-negative breast cancer: a case-control and genetic analysis","volume":"12","author":"Paranjape","year":"2011","journal-title":"Lancet Oncol."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B15","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1038\/nrg2841","article-title":"Advances in understanding cancer genomes through second-generation sequencing","volume":"11","author":"Meyerson","year":"2010","journal-title":"Nat. Rev. Genet."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B16","doi-asserted-by":"crossref","first-page":"214","DOI":"10.1038\/nature09744","article-title":"The genomic complexity of primary human prostate cancer","volume":"470","author":"Berger","year":"2011","journal-title":"Nature"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B17","doi-asserted-by":"crossref","first-page":"5316","DOI":"10.1182\/blood-2010-05-285395","article-title":"Complete characterization of the microRNAome in a patient with acute myeloid leukemia","volume":"116","author":"Ramsingh","year":"2010","journal-title":"Blood"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B18","doi-asserted-by":"crossref","first-page":"D109","DOI":"10.1093\/nar\/gkh023","article-title":"The microRNA registry","volume":"32","author":"Griffiths-Jones","year":"2004","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B19","doi-asserted-by":"crossref","first-page":"D140","DOI":"10.1093\/nar\/gkj112","article-title":"miRBase: microRNA sequences, targets and gene nomenclature","volume":"34","author":"Griffiths-Jones","year":"2006","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B20","doi-asserted-by":"crossref","first-page":"D154","DOI":"10.1093\/nar\/gkm952","article-title":"miRBase: tools for microRNA genomics","volume":"36","author":"Griffiths-Jones","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B21","doi-asserted-by":"crossref","first-page":"D152","DOI":"10.1093\/nar\/gkq1027","article-title":"miRBase: integrating microRNA annotation and deep-sequencing data","volume":"39","author":"Kozomara","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B22","doi-asserted-by":"crossref","first-page":"1346","DOI":"10.1093\/bioinformatics\/btr149","article-title":"The sufficient minimal set of miRNA seed types","volume":"27","author":"Ellwanger","year":"2011","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B23","doi-asserted-by":"crossref","first-page":"1139","DOI":"10.1038\/nsmb.2115","article-title":"Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs","volume":"18","author":"Garcia","year":"2011","journal-title":"Nat. Struct. Mol. Biol."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B24","doi-asserted-by":"crossref","first-page":"1278","DOI":"10.1038\/ng2135","article-title":"The role of site accessibility in microRNA target recognition","volume":"39","author":"Kertesz","year":"2007","journal-title":"Nat. Genet."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B25","doi-asserted-by":"crossref","first-page":"9362","DOI":"10.1073\/pnas.0903103106","article-title":"Potential etiologic and functional implications of genome-wide association loci for human diseases and traits","volume":"106","author":"Hindorff","year":"2009","journal-title":"Proc. Natl Acad. Sci. USA"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B26","doi-asserted-by":"crossref","first-page":"928","DOI":"10.1038\/ejhg.2011.53","article-title":"Cancer GAMAdb: database of cancer genetic associations from meta-analyses and genome-wide association studies","volume":"19","author":"Schully","year":"2011","journal-title":"Eur. J. Hum. Genet."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B27","doi-asserted-by":"crossref","first-page":"D109","DOI":"10.1093\/nar\/gkr988","article-title":"KEGG for integration and interpretation of large-scale molecular data sets","volume":"40","author":"Kanehisa","year":"2012","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B28","doi-asserted-by":"crossref","first-page":"609","DOI":"10.1038\/nature10166","article-title":"Integrated genomic analyses of ovarian carcinoma","volume":"474","author":"Cancer Genome Atlas Research Network","year":"2011","journal-title":"Nature"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B29","doi-asserted-by":"crossref","first-page":"330","DOI":"10.1038\/nature11252","article-title":"Comprehensive molecular characterization of human colon and rectal cancer","volume":"487","author":"Cancer Genome Atlas Research Network","year":"2012","journal-title":"Nature"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B30","doi-asserted-by":"crossref","first-page":"D51","DOI":"10.1093\/nar\/gkl797","article-title":"PolymiRTS database: linking polymorphisms in microRNA target sites with complex traits","volume":"35","author":"Bao","year":"2007","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B31","doi-asserted-by":"crossref","first-page":"D216","DOI":"10.1093\/nar\/gkr1026","article-title":"PolymiRTS database 2.0: linking polymorphisms in microRNA target sites with human diseases and complex traits","volume":"40","author":"Ziebarth","year":"2012","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B32","doi-asserted-by":"crossref","first-page":"D222","DOI":"10.1093\/nar\/gkr1161","article-title":"TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support","volume":"40","author":"Vergoulis","year":"2012","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B33","doi-asserted-by":"crossref","first-page":"44","DOI":"10.1186\/1471-2164-13-44","article-title":"miRdSNP: a database of disease-associated SNPs and microRNA target sites on 3\u2032-UTRs of human genes","volume":"13","author":"Bruno","year":"2012","journal-title":"BMC Genomics"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B34","doi-asserted-by":"crossref","first-page":"1963","DOI":"10.1093\/carcin\/bgn172","article-title":"A functional polymorphism in the miR-146a gene and age of familial breast\/ovarian cancer diagnosis","volume":"29","author":"Shen","year":"2008","journal-title":"Carcinogenesis"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B35","doi-asserted-by":"crossref","first-page":"467","DOI":"10.1002\/pros.21149","article-title":"A functional polymorphism in pre-miR-146a gene is associated with prostate cancer risk and mature miR-146a expression in vivo","volume":"70","author":"Xu","year":"2010","journal-title":"Prostate"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B36","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/j.ygyno.2011.03.032","article-title":"Polymorphism of the pre-miR-146a is associated with risk of cervical cancer in a Chinese population","volume":"122","author":"Yue","year":"2011","journal-title":"Gynecol. Oncol."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B37","doi-asserted-by":"crossref","first-page":"7269","DOI":"10.1073\/pnas.0802682105","article-title":"Common SNP in pre-miR-146a decreases mature miR expression and predisposes to papillary thyroid carcinoma","volume":"105","author":"Jazdzewski","year":"2008","journal-title":"Proc. Natl Acad. Sci. USA"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B38","doi-asserted-by":"crossref","first-page":"7459","DOI":"10.1158\/0008-5472.CAN-09-1201","article-title":"A risk variant in an miR-125b binding site in BMPR1B is associated with breast cancer pathogenesis","volume":"69","author":"Saetrom","year":"2009","journal-title":"Cancer Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B39","doi-asserted-by":"crossref","first-page":"993","DOI":"10.1038\/nature08987","article-title":"International network of cancer genome projects","volume":"464","author":"Hudson","year":"2010","journal-title":"Nature"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B40","doi-asserted-by":"crossref","first-page":"619","DOI":"10.1038\/ng.2287","article-title":"The pediatric cancer genome project","volume":"44","author":"Downing","year":"2012","journal-title":"Nat. Genet."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B41","doi-asserted-by":"crossref","first-page":"D945","DOI":"10.1093\/nar\/gkq929","article-title":"COSMIC: mining complete cancer genomes in the catalogue of somatic mutations in cancer","volume":"39","author":"Forbes","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B42","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1038\/nature08170","article-title":"Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps","volume":"460","author":"Chi","year":"2009","journal-title":"Nature"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B43","doi-asserted-by":"crossref","first-page":"129","DOI":"10.1016\/j.cell.2010.03.009","article-title":"Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP","volume":"141","author":"Hafner","year":"2010","journal-title":"Cell"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B44","doi-asserted-by":"crossref","first-page":"D163","DOI":"10.1093\/nar\/gkq1107","article-title":"miRTarBase: a database curates experimentally validated microRNA-target interactions","volume":"39","author":"Hsu","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B45","doi-asserted-by":"crossref","first-page":"D105","DOI":"10.1093\/nar\/gkn851","article-title":"miRecords: an integrated resource for microRNA-target interactions","volume":"37","author":"Xiao","year":"2009","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B46","doi-asserted-by":"crossref","first-page":"e85","DOI":"10.1371\/journal.pbio.0030085","article-title":"Principles of microRNA-target recognition","volume":"3","author":"Brennecke","year":"2005","journal-title":"PLoS Biol."},{"key":"key\n\t\t\t\t20171013052205_gks1138-B47","doi-asserted-by":"crossref","first-page":"e18067","DOI":"10.1371\/journal.pone.0018067","article-title":"The impact of miRNA target sites in coding sequences and in 3\u2032-UTRs","volume":"6","author":"Fang","year":"2011","journal-title":"PLoS One"},{"key":"key\n\t\t\t\t20171013052205_gks1138-B48","doi-asserted-by":"crossref","first-page":"1175","DOI":"10.1101\/gr.089367.108","article-title":"New class of microRNA targets containing simultaneous 5\u2032-UTR and 3\u2032-UTR interaction sites","volume":"19","author":"Lee","year":"2009","journal-title":"Genome Res."}],"container-title":["Nucleic Acids Research"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/nar\/article-pdf\/41\/D1\/D977\/18788147\/gks1138.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,7,5]],"date-time":"2019-07-05T22:04:09Z","timestamp":1562364249000},"score":1,"resource":{"primary":{"URL":"http:\/\/academic.oup.com\/nar\/article\/41\/D1\/D977\/1061537\/SomamiR-a-database-for-somatic-mutations-impacting"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012,11,23]]},"references-count":48,"journal-issue":{"issue":"D1","published-online":{"date-parts":[[2012,11,23]]},"published-print":{"date-parts":[[2013,1,1]]}},"URL":"https:\/\/doi.org\/10.1093\/nar\/gks1138","relation":{},"ISSN":["0305-1048","1362-4962"],"issn-type":[{"value":"0305-1048","type":"print"},{"value":"1362-4962","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2013,1,1]]},"published":{"date-parts":[[2012,11,23]]}}}