{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,28]],"date-time":"2026-09-28T05:24:11Z","timestamp":1790573051769,"version":"4.1.0"},"reference-count":35,"publisher":"Oxford University Press (OUP)","issue":"W1","license":[{"start":{"date-parts":[[2016,10,4]],"date-time":"2016-10-04T00:00:00Z","timestamp":1475539200000},"content-version":"vor","delay-in-days":1211,"URL":"http:\/\/creativecommons.org\/licenses\/by\/3.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013,7,1]]},"DOI":"10.1093\/nar\/gkt531","type":"journal-article","created":{"date-parts":[[2013,6,12]],"date-time":"2013-06-12T22:49:13Z","timestamp":1371077353000},"page":"W510-W517","source":"Crossref","is-referenced-by-count":122,"title":["DigSee: disease gene search engine with evidence sentences (version cancer)"],"prefix":"10.1093","volume":"41","author":[{"given":"Jeongkyun","family":"Kim","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Seongeun","family":"So","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hee-Jin","family":"Lee","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jong C.","family":"Park","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jung-jae","family":"Kim","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hyunju","family":"Lee","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2013,6,11]]},"reference":[{"key":"key\n\t\t\t\t20171013122914_gkt531-B1","doi-asserted-by":"crossref","first-page":"baq020","DOI":"10.1093\/database\/baq020","article-title":"GeneCards Version 3: the human gene integrator","volume":"2010","author":"Safran","year":"2010","journal-title":"Database"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B2","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1186\/gm13","article-title":"The human gene mutation database: 2008 update","volume":"1","author":"Stenson","year":"2009","journal-title":"Genome Med."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B3","doi-asserted-by":"crossref","first-page":"219","DOI":"10.1186\/1471-2407-9-219","article-title":"DDEC: Dragon database of genes implicated in esophageal cancer","volume":"9","author":"Essack","year":"2009","journal-title":"BMC Cancer"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B4","doi-asserted-by":"crossref","first-page":"D980","DOI":"10.1093\/nar\/gkq849","article-title":"DDPC: dragon database of genes associated with prostate cancer","volume":"39","author":"Maqungo","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B5","doi-asserted-by":"crossref","first-page":"W399","DOI":"10.1093\/nar\/gkn296","article-title":"PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites","volume":"36","author":"Cheng","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B6","doi-asserted-by":"crossref","first-page":"W455","DOI":"10.1093\/nar\/gkr246","article-title":"G\u00e9nie: literature-based gene prioritization at multi genomic scale","volume":"39","author":"Fontaine","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B7","doi-asserted-by":"crossref","first-page":"2559","DOI":"10.1093\/bioinformatics\/btn469","article-title":"FACTA: a text search engine for finding associated biomedical concepts","volume":"24","author":"Tsuruoka","year":"2008","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B8","doi-asserted-by":"crossref","first-page":"W212","DOI":"10.1093\/nar\/gkm223","article-title":"Update of the G2D tool for prioritization of gene candidates to inherited diseases","volume":"35","author":"Perez-Iratxeta","year":"2007","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B9","doi-asserted-by":"crossref","first-page":"W585","DOI":"10.1093\/nar\/gks563","article-title":"GeneView: a comprehensive semantic search engine for PubMed","volume":"40","author":"Thomas","year":"2012","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B10","doi-asserted-by":"crossref","first-page":"D1035","DOI":"10.1093\/nar\/gkq1126","article-title":"DrugBank 3.0: a comprehensive resource for \u2018omics\u2019 research on drugs","volume":"39","author":"Knox","year":"2011","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B11","doi-asserted-by":"crossref","first-page":"471","DOI":"10.1186\/1471-2105-12-471","article-title":"Meinfotext 2.0: gene methylation and cancer relation extraction from biomedical literature","volume":"12","author":"Fang","year":"2011","journal-title":"BMC Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B12","doi-asserted-by":"crossref","first-page":"D842","DOI":"10.1093\/nar\/gkm788","article-title":"PubMeth: a cancer methylation database combining text-mining and expert annotation","volume":"36","author":"Ongenaert","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B13"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B14","doi-asserted-by":"crossref","DOI":"10.3115\/1572340.1572343","article-title":"Extracting complex biological events with rich graph-based feature sets","author":"Bj\u00f6rne","year":"2009"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B15","doi-asserted-by":"crossref","first-page":"2476","DOI":"10.1158\/0008-5472.CAN-10-2585","article-title":"Diagnosis of prostate cancer using differentially expressed genes in stroma","volume":"71","author":"Jia","year":"2011","journal-title":"Cancer Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B16","doi-asserted-by":"crossref","first-page":"511","DOI":"10.1158\/1541-7786.MCR-05-0011","article-title":"Overexpression of 15-lipoxygenase-1 induces growth arrest through phosphorylation of p53 in human colorectal cancer cells","volume":"3","author":"Kim","year":"2005","journal-title":"Mol. Cancer Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B17","first-page":"5952","article-title":"Altered subcellular localization and low frequency of mutations of ING1 in human brain tumors","volume":"9","author":"Vieyra","year":"2003","journal-title":"Clin. Cancer Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B18","doi-asserted-by":"crossref","first-page":"503","DOI":"10.1369\/jhc.2009.952929","article-title":"Eukaryotic initiation factors (eIF) 2alpha and 4E expression, localization, and phosphorylation in brain tumors","volume":"57","author":"Tejada","year":"2009","journal-title":"J. Histochem. Cytochem."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B19","doi-asserted-by":"crossref","first-page":"3191","DOI":"10.1093\/bioinformatics\/bti475","article-title":"Abner: an open source tool for automatically tagging genes, proteins and other entity names in text","volume":"21","author":"Settles","year":"2005","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B20","doi-asserted-by":"crossref","first-page":"S2","DOI":"10.1186\/1471-2105-6-S1-S2","article-title":"BioCreAtIvE task 1A: gene mention finding evaluation","volume":"6","author":"Yeh","year":"2005","journal-title":"BMC Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B21","first-page":"652","article-title":"Banner: an executable survey of advances in biomedical named entity recognition","volume":"13","author":"Leaman","year":"2008","journal-title":"Pac. Symp. Biocomput."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B22","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1186\/1471-2105-11-157","article-title":"Moara: a java library for extracting and normalizing gene and protein mentions","volume":"11","author":"Neves","year":"2010","journal-title":"BMC Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B23","doi-asserted-by":"crossref","first-page":"S3","DOI":"10.1186\/gb-2008-9-s2-s3","article-title":"Overview of BioCreative II gene normalization","volume":"9","author":"Morgan","year":"2008","journal-title":"Genome Biol."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B24","doi-asserted-by":"crossref","DOI":"10.1093\/database\/bar009","article-title":"UniProt Knowledgebase: a hub of integrated protein data","volume":"2011","author":"Magrane","year":"2011","journal-title":"Database"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B25","doi-asserted-by":"crossref","first-page":"D545","DOI":"10.1093\/nar\/gks1066","article-title":"Genenames.org: the HGNC resources in 2013","volume":"41","author":"Gray","year":"2013","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B26","doi-asserted-by":"crossref","first-page":"i126","DOI":"10.1093\/bioinformatics\/btn299","article-title":"Inter-species normalization of gene mentions with GNAT","volume":"24","author":"Hakenberg","year":"2008","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B27","article-title":"Generating typed dependency parses from phrase structure parses","author":"DeMarneffe","year":"2006"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B28","doi-asserted-by":"crossref","first-page":"528","DOI":"10.1158\/0008-5472.CAN-06-1672","article-title":"Sox9 is expressed in normal prostate basal cells and regulates androgen receptor expression in prostate cancer cells","volume":"67","author":"Wang","year":"2007","journal-title":"Cancer Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B29","doi-asserted-by":"crossref","first-page":"608","DOI":"10.4161\/cbt.5.6.2661","article-title":"Inhibition of cd147 expression reduces tumor cell invasion in human prostate cancer cell line via RNA interference","volume":"5","author":"Wang","year":"2006","journal-title":"Cancer Biol. Ther."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B30","doi-asserted-by":"crossref","first-page":"235","DOI":"10.1093\/ijl\/3.4.235","article-title":"Introduction to wordnet: an on-line lexical database","volume":"3","author":"Miller","year":"1990","journal-title":"Int. J. Lexicography"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B31","volume-title":"Molecular Biology of Cancer: Mechanisms, Targets, and Therapeutics","author":"Pecorino","year":"2012"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B32","doi-asserted-by":"crossref","first-page":"857","DOI":"10.1093\/bioinformatics\/btk044","article-title":"LSAT: learning about alternative transcripts in MEDLINE","volume":"22","author":"Shah","year":"2006","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B33","doi-asserted-by":"crossref","first-page":"D412","DOI":"10.1093\/nar\/gkn760","article-title":"STRING 8\u2013a global view on proteins and their functional interactions in 630 organisms","volume":"37","author":"Jensen","year":"2009","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20171013122914_gkt531-B34","doi-asserted-by":"crossref","first-page":"435","DOI":"10.1186\/1471-2105-12-435","article-title":"PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries","volume":"12","author":"Barbosa-Silva","year":"2011","journal-title":"BMC Bioinformatics"},{"key":"key\n\t\t\t\t20171013122914_gkt531-B35","doi-asserted-by":"crossref","first-page":"664","DOI":"10.1038\/ng0704-664","article-title":"A gene network for navigating the literature","volume":"36","author":"Hoffmann","year":"2004","journal-title":"Nat. Genet."}],"container-title":["Nucleic Acids Research"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/nar\/article-pdf\/41\/W1\/W510\/3885620\/gkt531.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,7,15]],"date-time":"2019-07-15T04:14:02Z","timestamp":1563164042000},"score":1,"resource":{"primary":{"URL":"http:\/\/academic.oup.com\/nar\/article\/41\/W1\/W510\/1114062\/DigSee-disease-gene-search-engine-with-evidence"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,6,11]]},"references-count":35,"journal-issue":{"issue":"W1","published-online":{"date-parts":[[2013,6,11]]},"published-print":{"date-parts":[[2013,7,1]]}},"URL":"https:\/\/doi.org\/10.1093\/nar\/gkt531","relation":{},"ISSN":["1362-4962","0305-1048"],"issn-type":[{"value":"1362-4962","type":"electronic"},{"value":"0305-1048","type":"print"}],"subject":[],"published-other":{"date-parts":[[2013,7,1]]},"published":{"date-parts":[[2013,6,11]]}}}