{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,7]],"date-time":"2026-05-07T22:49:52Z","timestamp":1778194192601,"version":"3.51.4"},"reference-count":43,"publisher":"Oxford University Press (OUP)","issue":"W1","license":[{"start":{"date-parts":[[2016,11,11]],"date-time":"2016-11-11T00:00:00Z","timestamp":1478822400000},"content-version":"vor","delay-in-days":534,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Nucleic Acids Res"],"published-print":{"date-parts":[[2015,7,1]]},"DOI":"10.1093\/nar\/gkv555","type":"journal-article","created":{"date-parts":[[2015,5,28]],"date-time":"2015-05-28T12:41:22Z","timestamp":1432816882000},"page":"W467-W473","source":"Crossref","is-referenced-by-count":212,"title":["sRNAtoolbox: an integrated collection of small RNA research tools"],"prefix":"10.1093","volume":"43","author":[{"given":"Antonio","family":"Rueda","sequence":"first","affiliation":[]},{"given":"Guillermo","family":"Barturen","sequence":"additional","affiliation":[]},{"given":"Ricardo","family":"Lebr\u00f3n","sequence":"additional","affiliation":[]},{"given":"Cristina","family":"G\u00f3mez-Mart\u00edn","sequence":"additional","affiliation":[]},{"given":"\u00c1ngel","family":"Alganza","sequence":"additional","affiliation":[]},{"given":"Jos\u00e9 L.","family":"Oliver","sequence":"additional","affiliation":[]},{"given":"Michael","family":"Hackenberg","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2015,5,27]]},"reference":[{"key":"2015063023244641000_43.W1.W467.1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.0020363"},{"key":"2015063023244641000_43.W1.W467.2","doi-asserted-by":"publisher","DOI":"10.1038\/nrg1379"},{"key":"2015063023244641000_43.W1.W467.3","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-arplant-050312-120043"},{"key":"2015063023244641000_43.W1.W467.4","doi-asserted-by":"publisher","DOI":"10.1111\/pbi.12318"},{"key":"2015063023244641000_43.W1.W467.5","doi-asserted-by":"publisher","DOI":"10.1093\/dnares\/dss037"},{"key":"2015063023244641000_43.W1.W467.6","doi-asserted-by":"publisher","DOI":"10.1016\/j.tig.2011.06.001"},{"key":"2015063023244641000_43.W1.W467.7","doi-asserted-by":"publisher","DOI":"10.1016\/j.molcel.2011.06.022"},{"key":"2015063023244641000_43.W1.W467.8","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2011.09.012"},{"key":"2015063023244641000_43.W1.W467.9","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.micro.112408.134243"},{"key":"2015063023244641000_43.W1.W467.10","doi-asserted-by":"publisher","DOI":"10.4161\/viru.26119"},{"key":"2015063023244641000_43.W1.W467.11","doi-asserted-by":"publisher","DOI":"10.1038\/nature03702"},{"key":"2015063023244641000_43.W1.W467.12","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks658"},{"key":"2015063023244641000_43.W1.W467.13","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2014.08.027"},{"key":"2015063023244641000_43.W1.W467.14","doi-asserted-by":"publisher","DOI":"10.1111\/j.1349-7006.2010.01650.x"},{"key":"2015063023244641000_43.W1.W467.15","doi-asserted-by":"publisher","DOI":"10.1016\/j.jprot.2014.02.012"},{"key":"2015063023244641000_43.W1.W467.16","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms6488"},{"key":"2015063023244641000_43.W1.W467.17","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btn428"},{"key":"2015063023244641000_43.W1.W467.18","doi-asserted-by":"publisher","DOI":"10.1038\/nbt1394"},{"key":"2015063023244641000_43.W1.W467.19","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp347"},{"key":"2015063023244641000_43.W1.W467.20","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr247"},{"key":"2015063023244641000_43.W1.W467.21","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp1127"},{"key":"2015063023244641000_43.W1.W467.22","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr357"},{"key":"2015063023244641000_43.W1.W467.23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts311"},{"key":"2015063023244641000_43.W1.W467.24","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr688"},{"key":"2015063023244641000_43.W1.W467.25","doi-asserted-by":"publisher","DOI":"10.1261\/rna.035279.112"},{"key":"2015063023244641000_43.W1.W467.26","doi-asserted-by":"publisher","DOI":"10.4161\/rna.25193"},{"key":"2015063023244641000_43.W1.W467.27","first-page":"21","article-title":"sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments","volume":"1","author":"Barturen","year":"2014","journal-title":"Methods Next Gener. Seq."},{"key":"2015063023244641000_43.W1.W467.28","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2010-11-10-r106"},{"key":"2015063023244641000_43.W1.W467.29","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp616"},{"key":"2015063023244641000_43.W1.W467.30","doi-asserted-by":"publisher","DOI":"10.1101\/gr.124321.111"},{"key":"2015063023244641000_43.W1.W467.31","doi-asserted-by":"publisher","DOI":"10.1038\/ng2135"},{"key":"2015063023244641000_43.W1.W467.32","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-292"},{"key":"2015063023244641000_43.W1.W467.33","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks554"},{"key":"2015063023244641000_43.W1.W467.34","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq233"},{"key":"2015063023244641000_43.W1.W467.35","doi-asserted-by":"crossref","DOI":"10.1002\/0471250953.bi0913s32","article-title":"Setting up the JBrowse genome browser","volume":"32","author":"Skinner","year":"2010","journal-title":"Curr. Protoc. Bioinformatics"},{"key":"2015063023244641000_43.W1.W467.36","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-10-421"},{"key":"2015063023244641000_43.W1.W467.37","doi-asserted-by":"publisher","DOI":"10.1038\/75556"},{"key":"2015063023244641000_43.W1.W467.38","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btn178"},{"key":"2015063023244641000_43.W1.W467.39","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr1161"},{"key":"2015063023244641000_43.W1.W467.40","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr319"},{"key":"2015063023244641000_43.W1.W467.41","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2009-10-3-r25"},{"key":"2015063023244641000_43.W1.W467.42","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0067461"},{"key":"2015063023244641000_43.W1.W467.43","doi-asserted-by":"crossref","first-page":"132","DOI":"10.4049\/jimmunol.192.Supp.132.9","article-title":"A Salmonella-encoded microRNA-like RNA facilitates bacterial invasion and intracellular replication via suppressing host cell inducible nitric oxide synthase (MPF3P.809)","volume":"192","author":"Gu","year":"2014","journal-title":"J. Immunol."}],"container-title":["Nucleic Acids Research"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/nar\/article-pdf\/43\/W1\/W467\/7476556\/gkv555.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,8,10]],"date-time":"2023-08-10T22:58:16Z","timestamp":1691708296000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/nar\/article-lookup\/doi\/10.1093\/nar\/gkv555"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,5,27]]},"references-count":43,"journal-issue":{"issue":"W1","published-online":{"date-parts":[[2015,6,30]]},"published-print":{"date-parts":[[2015,7,1]]}},"alternative-id":["10.1093\/nar\/gkv555"],"URL":"https:\/\/doi.org\/10.1093\/nar\/gkv555","relation":{},"ISSN":["0305-1048","1362-4962"],"issn-type":[{"value":"0305-1048","type":"print"},{"value":"1362-4962","type":"electronic"}],"subject":[],"published":{"date-parts":[[2015,5,27]]}}}