{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,15]],"date-time":"2026-01-15T23:52:32Z","timestamp":1768521152202,"version":"3.49.0"},"reference-count":48,"publisher":"Oxford University Press (OUP)","issue":"D1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Nucleic Acids Res"],"published-print":{"date-parts":[[2017,1,4]]},"DOI":"10.1093\/nar\/gkw992","type":"journal-article","created":{"date-parts":[[2016,10,21]],"date-time":"2016-10-21T19:05:23Z","timestamp":1477076723000},"page":"D446-D456","source":"Crossref","is-referenced-by-count":139,"title":["Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements"],"prefix":"10.1093","volume":"45","author":[{"given":"Supratim","family":"Mukherjee","sequence":"first","affiliation":[]},{"given":"Dimitri","family":"Stamatis","sequence":"additional","affiliation":[]},{"given":"Jon","family":"Bertsch","sequence":"additional","affiliation":[]},{"given":"Galina","family":"Ovchinnikova","sequence":"additional","affiliation":[]},{"given":"Olena","family":"Verezemska","sequence":"additional","affiliation":[]},{"given":"Michelle","family":"Isbandi","sequence":"additional","affiliation":[]},{"given":"Alex D.","family":"Thomas","sequence":"additional","affiliation":[]},{"given":"Rida","family":"Ali","sequence":"additional","affiliation":[]},{"given":"Kaushal","family":"Sharma","sequence":"additional","affiliation":[]},{"given":"Nikos C.","family":"Kyrpides","sequence":"additional","affiliation":[]},{"given":"T.\u00a0B.\u00a0K.","family":"Reddy","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2016,10,27]]},"reference":[{"key":"2017010323151414000_45.D1.D446.1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/15.9.773"},{"key":"2017010323151414000_45.D1.D446.2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/29.1.126"},{"key":"2017010323151414000_45.D1.D446.3","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkj145"},{"key":"2017010323151414000_45.D1.D446.4","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkm884"},{"key":"2017010323151414000_45.D1.D446.5","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp848"},{"key":"2017010323151414000_45.D1.D446.6","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku950"},{"key":"2017010323151414000_45.D1.D446.7","doi-asserted-by":"publisher","DOI":"10.1038\/nature19094"},{"key":"2017010323151414000_45.D1.D446.8","doi-asserted-by":"crossref","first-page":"e11888","DOI":"10.7554\/eLife.11888","article-title":"Recuring patterns in bacterioplankton dynamics during coastal spring algae blooms","volume":"5","author":"Teeling","year":"2016","journal-title":"eLife"},{"key":"2017010323151414000_45.D1.D446.9","doi-asserted-by":"publisher","DOI":"10.1038\/srep16825"},{"key":"2017010323151414000_45.D1.D446.10","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.1002195"},{"key":"2017010323151414000_45.D1.D446.11","doi-asserted-by":"publisher","DOI":"10.1126\/science.1183605"},{"key":"2017010323151414000_45.D1.D446.12","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt1183"},{"key":"2017010323151414000_45.D1.D446.13","doi-asserted-by":"publisher","DOI":"10.1038\/nature08656"},{"key":"2017010323151414000_45.D1.D446.14","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.1001920"},{"key":"2017010323151414000_45.D1.D446.15","doi-asserted-by":"publisher","DOI":"10.4056\/sigs.5068949"},{"key":"2017010323151414000_45.D1.D446.16","doi-asserted-by":"publisher","DOI":"10.1016\/j.mib.2008.05.006"},{"key":"2017010323151414000_45.D1.D446.17","doi-asserted-by":"publisher","DOI":"10.1038\/nature12352"},{"key":"2017010323151414000_45.D1.D446.18","doi-asserted-by":"publisher","DOI":"10.1038\/nature19068"},{"key":"2017010323151414000_45.D1.D446.19","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms10476"},{"key":"2017010323151414000_45.D1.D446.20","doi-asserted-by":"publisher","DOI":"10.1007\/s00792-014-0664-7"},{"key":"2017010323151414000_45.D1.D446.21","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt963"},{"key":"2017010323151414000_45.D1.D446.22","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt919"},{"key":"2017010323151414000_45.D1.D446.23","doi-asserted-by":"publisher","DOI":"10.1186\/s40793-015-0077-y"},{"key":"2017010323151414000_45.D1.D446.24","doi-asserted-by":"publisher","DOI":"10.1186\/s40793-016-0138-x"},{"key":"2017010323151414000_45.D1.D446.25","doi-asserted-by":"publisher","DOI":"10.4056\/sigs.5559608"},{"key":"2017010323151414000_45.D1.D446.26","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1823"},{"key":"2017010323151414000_45.D1.D446.27","doi-asserted-by":"publisher","DOI":"10.1186\/1944-3277-9-18"},{"key":"2017010323151414000_45.D1.D446.28","doi-asserted-by":"publisher","DOI":"10.4056\/sigs.2515706"},{"key":"2017010323151414000_45.D1.D446.29","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv1290"},{"key":"2017010323151414000_45.D1.D446.30","doi-asserted-by":"publisher","DOI":"10.1016\/j.syapm.2013.11.002"},{"key":"2017010323151414000_45.D1.D446.31","first-page":"23","article-title":"On using the Manual","volume-title":"Bergey's Manual\u00ae of Systematic Bacteriology","volume":"5","author":"Krieg","year":"2012"},{"key":"2017010323151414000_45.D1.D446.32","doi-asserted-by":"crossref","unstructured":"Parker C.T. Tindall B.J. Garrity G.M. International code of nomenclature of prokaryotes. Int. J. Syst. Evol. Microbiol. 2015. doi:10.1099\/ijsem.0.000778.","DOI":"10.1099\/ijsem.0.000778"},{"key":"2017010323151414000_45.D1.D446.33","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr1178"},{"key":"2017010323151414000_45.D1.D446.34","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv1276"},{"key":"2017010323151414000_45.D1.D446.35","doi-asserted-by":"crossref","first-page":"16048","DOI":"10.1038\/nmicrobiol.2016.48","article-title":"A new view of the tree of life","volume":"1","author":"Hug","year":"2016","journal-title":"Nat. Microbiol."},{"key":"2017010323151414000_45.D1.D446.36","doi-asserted-by":"publisher","DOI":"10.1038\/nprot.2014.067"},{"key":"2017010323151414000_45.D1.D446.37","doi-asserted-by":"publisher","DOI":"10.1186\/1944-3277-10-18"},{"key":"2017010323151414000_45.D1.D446.38","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2015.100"},{"key":"2017010323151414000_45.D1.D446.39","doi-asserted-by":"publisher","DOI":"10.4056\/sigs.4851102"},{"key":"2017010323151414000_45.D1.D446.40","doi-asserted-by":"publisher","DOI":"10.1186\/s13068-016-0565-3"},{"key":"2017010323151414000_45.D1.D446.41","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr854"},{"key":"2017010323151414000_45.D1.D446.42","doi-asserted-by":"crossref","first-page":"D581","DOI":"10.1093\/nar\/gkt1099","article-title":"PATRIC, the bacterial bioinformatics database and analysis resource","volume":"42","author":"Wattam","year":"2013","journal-title":"Nucleic Acids Res."},{"key":"2017010323151414000_45.D1.D446.43","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv1195"},{"key":"2017010323151414000_45.D1.D446.44","first-page":"bas020","article-title":"Text mining for the biocuration workflow","volume":"2012","author":"Hirschman","year":"2012","journal-title":"Database J. Biol. Databases Curation"},{"key":"2017010323151414000_45.D1.D446.45","first-page":"baw005","article-title":"EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation","volume":"2016","author":"Pafilis","year":"2016","journal-title":"Database J. Biol. Databases Curation"},{"key":"2017010323151414000_45.D1.D446.46","doi-asserted-by":"crossref","first-page":"3249","DOI":"10.1093\/bioinformatics\/btu524","article-title":"BioTextQuest+: a knowledge integration platform for literature mining and concept discovery","volume":"30","author":"Papanikolaou","year":"2015","journal-title":"Bioinformatics"},{"key":"2017010323151414000_45.D1.D446.47","first-page":"baw115","article-title":"Crowdsourcing and curation: perspectives from biology and natural language processing","volume":"2016","author":"Hirschman","year":"2016","journal-title":"Database J. Biol. Databases Curation"},{"key":"2017010323151414000_45.D1.D446.48","first-page":"baw075","article-title":"BioSharing: curated and crowd-sourced metadata standards, databases and data policies in the life sciences","volume":"2016","author":"McQuilton","year":"2016","journal-title":"Database J. Biol. Databases Curation"}],"container-title":["Nucleic Acids Research"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/nar\/article-pdf\/45\/D1\/D446\/8847367\/gkw992.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,8,24]],"date-time":"2017-08-24T10:20:12Z","timestamp":1503570012000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/nar\/article-lookup\/doi\/10.1093\/nar\/gkw992"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,10,27]]},"references-count":48,"journal-issue":{"issue":"D1","published-online":{"date-parts":[[2017,1,3]]},"published-print":{"date-parts":[[2017,1,4]]}},"alternative-id":["10.1093\/nar\/gkw992"],"URL":"https:\/\/doi.org\/10.1093\/nar\/gkw992","relation":{},"ISSN":["0305-1048","1362-4962"],"issn-type":[{"value":"0305-1048","type":"print"},{"value":"1362-4962","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,10,27]]}}}