{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,9]],"date-time":"2026-04-09T23:07:27Z","timestamp":1775776047165,"version":"3.50.1"},"reference-count":32,"publisher":"Oxford University Press (OUP)","issue":"D1","license":[{"start":{"date-parts":[[2017,10,30]],"date-time":"2017-10-30T00:00:00Z","timestamp":1509321600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,1,4]]},"DOI":"10.1093\/nar\/gkx1011","type":"journal-article","created":{"date-parts":[[2017,10,24]],"date-time":"2017-10-24T15:28:05Z","timestamp":1508858885000},"page":"D802-D808","source":"Crossref","is-referenced-by-count":418,"title":["Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species"],"prefix":"10.1093","volume":"46","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7054-800X","authenticated-orcid":false,"given":"Paul Julian","family":"Kersey","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"James E","family":"Allen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alexis","family":"Allot","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Matthieu","family":"Barba","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sanjay","family":"Boddu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6536-0950","authenticated-orcid":false,"given":"Bruce J","family":"Bolt","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Denise","family":"Carvalho-Silva","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mikkel","family":"Christensen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Paul","family":"Davis","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Christoph","family":"Grabmueller","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Navin","family":"Kumar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zicheng","family":"Liu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Thomas","family":"Maurel","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ben","family":"Moore","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mark D","family":"McDowall","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7007-9234","authenticated-orcid":false,"given":"Uma","family":"Maheswari","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Guy","family":"Naamati","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Victoria","family":"Newman","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chuang Kee","family":"Ong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Paulini","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7582-1565","authenticated-orcid":false,"given":"Helder","family":"Pedro","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0776-4428","authenticated-orcid":false,"given":"Emily","family":"Perry","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Matthew","family":"Russell","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Helen","family":"Sparrow","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Electra","family":"Tapanari","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kieron","family":"Taylor","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alessandro","family":"Vullo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gareth","family":"Williams","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5310-8830","authenticated-orcid":false,"given":"Amonida","family":"Zadissia","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Andrew","family":"Olson","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Joshua","family":"Stein","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sharon","family":"Wei","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marcela","family":"Tello-Ruiz","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Doreen","family":"Ware","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Aurelien","family":"Luciani","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Simon","family":"Potter","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8626-2148","authenticated-orcid":false,"given":"Robert D","family":"Finn","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Martin","family":"Urban","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kim E","family":"Hammond-Kosack","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dan M","family":"Bolser","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nishadi","family":"De\u00a0Silva","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1751-9226","authenticated-orcid":false,"given":"Kevin L","family":"Howe","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nicholas","family":"Langridge","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gareth","family":"Maslen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Daniel Michael","family":"Staines","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Andrew","family":"Yates","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2017,10,30]]},"reference":[{"key":"key\n\t\t\t\t20180103185615_B1","doi-asserted-by":"crossref","first-page":"D662","DOI":"10.1093\/nar\/gku1010","article-title":"Ensembl 2015","volume":"43","year":"2015","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B2","doi-asserted-by":"crossref","first-page":"D32","DOI":"10.1093\/nar\/gkw1106","article-title":"European Nucleotide Archive in 2016","volume":"45","year":"2017","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B3","doi-asserted-by":"crossref","first-page":"D67","DOI":"10.1093\/nar\/gkv1276","article-title":"GenBank","volume":"44","year":"2016","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B4","doi-asserted-by":"crossref","first-page":"D25","DOI":"10.1093\/nar\/gkw1001","article-title":"DNA Data Bank of Japan","volume":"45","year":"2017","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B5","doi-asserted-by":"crossref","first-page":"D158","DOI":"10.1093\/nar\/gkw1099","volume":"45","author":"UniProt: the universal protein knowledgebase","year":"2017","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B6","doi-asserted-by":"crossref","first-page":"1236","DOI":"10.1093\/bioinformatics\/btu031","article-title":"InterProScan 5: genome-scale protein function classification","volume":"30","year":"2014","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20180103185615_B7","doi-asserted-by":"crossref","first-page":"W589","DOI":"10.1093\/nar\/gkv350","article-title":"The BioMart community portal: an innovative alternative to large, centralized data repositories","volume":"43","year":"2015","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B8","doi-asserted-by":"crossref","first-page":"D1133","DOI":"10.1093\/nar\/gkv1179","article-title":"Gramene 2016: comparative plant genomics and pathway resources","volume":"44","year":"2016","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B9","doi-asserted-by":"crossref","first-page":"D688","DOI":"10.1093\/nar\/gkv1052","article-title":"PhytoPath: an integrative resource for plant pathogen genomics","volume":"44","year":"2016","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B10","doi-asserted-by":"crossref","first-page":"D707","DOI":"10.1093\/nar\/gku1117","article-title":"VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases","volume":"43","author":"VectorBase Consortium","year":"2015","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B11","doi-asserted-by":"crossref","first-page":"D774","DOI":"10.1093\/nar\/gkv1217","article-title":"WormBase 2016: expanding to enable helminth genomic research","volume":"44","year":"2016","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B12","doi-asserted-by":"crossref","first-page":"baw139","DOI":"10.1093\/database\/baw139","article-title":"Minimizing proteome redundancy in the UniProt Knowledgebase","volume":"2016","year":"2016","journal-title":"Database (Oxford)"},{"key":"key\n\t\t\t\t20180103185615_B13","doi-asserted-by":"crossref","first-page":"76","DOI":"10.1186\/s13059-015-0623-3","article-title":"The genomes of two key bumblebee species with primitive eusocial organization","volume":"16","year":"2015","journal-title":"Genome Biol."},{"key":"key\n\t\t\t\t20180103185615_B14","doi-asserted-by":"crossref","first-page":"220","DOI":"10.1038\/nature14668","article-title":"The octopus genome and the evolution of cephalopod neural and morphological novelties","volume":"524","year":"2015","journal-title":"Nature"},{"key":"key\n\t\t\t\t20180103185615_B15","doi-asserted-by":"crossref","first-page":"585","DOI":"10.1186\/s13071-015-1198-2","article-title":"Draft genome of the scabies mite","volume":"8","year":"2015","journal-title":"Parasites Vectors"},{"key":"key\n\t\t\t\t20180103185615_B16","doi-asserted-by":"crossref","first-page":"546","DOI":"10.1038\/nature12817","article-title":"The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)","volume":"505","year":"2014","journal-title":"Nature"},{"key":"key\n\t\t\t\t20180103185615_B17","doi-asserted-by":"crossref","first-page":"950","DOI":"10.1126\/science.1253435","article-title":"Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome","volume":"345","year":"2014","journal-title":"Science"},{"key":"key\n\t\t\t\t20180103185615_B18","doi-asserted-by":"crossref","first-page":"427","DOI":"10.1038\/nature22043","article-title":"A chromosome conformation capture ordered sequence of the barley genome","volume":"544","year":"2017","journal-title":"Nature"},{"key":"key\n\t\t\t\t20180103185615_B19","doi-asserted-by":"crossref","first-page":"885","DOI":"10.1101\/gr.217117.116","article-title":"An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations","volume":"27","year":"2017","journal-title":"Genome Res."},{"key":"key\n\t\t\t\t20180103185615_B20","doi-asserted-by":"crossref","first-page":"R93","DOI":"10.1186\/gb-2013-14-8-r93","article-title":"Web Apollo: a web-based genomic annotation editing platform","volume":"14","year":"2013","journal-title":"Genome Biol."},{"key":"key\n\t\t\t\t20180103185615_B21","doi-asserted-by":"crossref","first-page":"75","DOI":"10.1111\/mpp.12384","article-title":"A gapless genome sequence of the fungus Botrytis cinerea","volume":"18","year":"2017","journal-title":"Mol. Plant Pathol."},{"key":"key\n\t\t\t\t20180103185615_B22","doi-asserted-by":"crossref","first-page":"734","DOI":"10.1101\/gr.114819.110","article-title":"Efficient storage of high throughput DNA sequencing data using reference-based compression","volume":"21","year":"2011","journal-title":"Genome Res."},{"key":"key\n\t\t\t\t20180103185615_B23","article-title":"Track Data Hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser","year":"2013","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20180103185615_B24"},{"key":"key\n\t\t\t\t20180103185615_B25","doi-asserted-by":"crossref","first-page":"W30","DOI":"10.1093\/nar\/gkv397","article-title":"HMMER web server: 2015 update","volume":"43","year":"2015","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B26","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","year":"1990","journal-title":"J. Mol. Biol."},{"key":"key\n\t\t\t\t20180103185615_B27","doi-asserted-by":"crossref","first-page":"D130","DOI":"10.1093\/nar\/gku1063","article-title":"Rfam 12.0: updates to the RNA families database","volume":"43","year":"2015","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B28","doi-asserted-by":"crossref","first-page":"955","DOI":"10.1093\/nar\/25.5.0955","article-title":"tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence","volume":"25","year":"1997","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B29","doi-asserted-by":"crossref","first-page":"D604","DOI":"10.1093\/nar\/gkw1089","article-title":"PHI-base: a new interface and further additions for the multi-species pathogen\u2013host interactions database","volume":"45","year":"2017","journal-title":"Nucleic Acids Res."},{"key":"key\n\t\t\t\t20180103185615_B30","doi-asserted-by":"crossref","first-page":"D1029","DOI":"10.1093\/nar\/gkw932","article-title":"Plant Reactome: a resource for plant pathways and comparative analysis","volume":"45","year":"2017","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20180103185615_B31","doi-asserted-by":"crossref","first-page":"5417","DOI":"10.1093\/jxb\/erv271","article-title":"Towards recommendations for metadata and data handling in plant phenotyping","volume":"66","year":"2015","journal-title":"J. Exp. Bot."},{"key":"key\n\t\t\t\t20180103185615_B32","doi-asserted-by":"crossref","first-page":"D50","DOI":"10.1093\/nar\/gkt1081","article-title":"Updates to BioSamples database at European Bioinformatics Institute","volume":"42","year":"2014","journal-title":"Nucleic Acids Res."}],"container-title":["Nucleic Acids Research"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/nar\/article-pdf\/46\/D1\/D802\/23161894\/gkx1011.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,4,2]],"date-time":"2018-04-02T10:40:37Z","timestamp":1522665637000},"score":1,"resource":{"primary":{"URL":"http:\/\/academic.oup.com\/nar\/article\/46\/D1\/D802\/4577569"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,10,30]]},"references-count":32,"journal-issue":{"issue":"D1","published-online":{"date-parts":[[2017,10,30]]},"published-print":{"date-parts":[[2018,1,4]]}},"URL":"https:\/\/doi.org\/10.1093\/nar\/gkx1011","relation":{},"ISSN":["0305-1048","1362-4962"],"issn-type":[{"value":"0305-1048","type":"print"},{"value":"1362-4962","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2018,1,4]]},"published":{"date-parts":[[2017,10,30]]}}}