{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,15]],"date-time":"2026-10-15T12:50:24Z","timestamp":1792068624985,"version":"4.4.0"},"reference-count":72,"publisher":"Oxford University Press (OUP)","license":[{"start":{"date-parts":[[2026,9,9]],"date-time":"2026-09-09T00:00:00Z","timestamp":1788912000000},"content-version":"am","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/pages\/standard-publication-reuse-rights"}],"funder":[{"name":"Northern Arizona University (NAU) Research and Creative Activity Support Grant","id":[{"id":"https:\/\/ror.org\/0272j5188","id-type":"ROR","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:title>Background and Aims<\/jats:title>\n                    <jats:p>Groundwater-dependent ecosystems support disproportionate biodiversity in arid regions, yet the population genetics of spring-specialist plants remains poorly understood. Here, we present the first species-wide genetic dataset for crimson monkeyflower (Mimulus verbenaceus, Phrymaceae), a spring-specialist plant distributed in seeps, springs and associated riparian areas across desert regions of North America. We aim to relate landscape features and climate gradients to the spatial genetic structuring within this system.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>Using genome-wide reduced representation sequencing data consisting of 10 760 single nucleotide polymorphisms from 175 individuals across 17 populations, we characterized the patterns of genetic differentiation and diversity. Population structure was assessed using ADMIXTURE and principal component analysis. We examined the contributions of climate to range-wide genetic variation in crimson monkeyflower using redundancy analysis.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Key Results<\/jats:title>\n                    <jats:p>Patterns of genetic differentiation were more consistent with those of spring-specialist animal taxa than with those of upland plants or generalist riparian plants. We found strong population structure both at broad regional scales and at fine local scales. Geographical and spatial structuring was a primary driver of genetic structure across all scales, whereas riparian connectivity influenced local patterns of diversity, and adaptation to local climatic variation was more influential at regional scales, with temperature, relative humidity and a monsoon-driven climate gradient contributing to genetic differentiation.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusions<\/jats:title>\n                    <jats:p>Our findings highlight the distinctive association with isolated perennial groundwater sources, in addition to climate gradients, with genetic variation in this spring-specialist plant. These findings suggest that spring-specialist plants deserve special consideration in ecological theory, management and conservation.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1093\/aob\/mcag291","type":"journal-article","created":{"date-parts":[[2026,9,8]],"date-time":"2026-09-08T11:34:58Z","timestamp":1788867298000},"source":"Crossref","is-referenced-by-count":0,"title":["Climate gradients and habitat discontinuity structure genetic variation in a spring-specialist plant"],"prefix":"10.1093","author":[{"ORCID":"https:\/\/orcid.org\/0009-0001-4778-2607","authenticated-orcid":false,"given":"Matthew","family":"Weiss","sequence":"first","affiliation":[{"name":"Department of Biological Sciences, Northern Arizona University , Flagstaff, AZ 86001 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Trevor M","family":"Faske","sequence":"additional","affiliation":[{"name":"Landscape Stewardship Collective , Flagstaff, AZ 86001 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Liza M","family":"Holeski","sequence":"additional","affiliation":[{"name":"Department of Biological Sciences, Northern Arizona University , Flagstaff, AZ 86001 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2026,9,9]]},"reference":[{"key":"2026101508112178200_mcag291-B1","doi-asserted-by":"publisher","first-page":"1655","DOI":"10.1101\/gr.094052.109","article-title":"Fast model-based estimation of ancestry in unrelated individuals","volume":"19","author":"Alexander","year":"2009","journal-title":"Genome Research"},{"key":"2026101508112178200_mcag291-B2","doi-asserted-by":"publisher","first-page":"2235","DOI":"10.2307\/1941697","article-title":"Density dependence resolves the stream drift paradox","volume":"76","author":"Anholt","year":"1995","journal-title":"Ecology"},{"key":"2026101508112178200_mcag291-B3","doi-asserted-by":"publisher","first-page":"1","DOI":"10.2174\/1875036201307010001","article-title":"Comparison of sequencing utility programs","volume":"7","author":"Aronesty","year":"2013","journal-title":"The Open Bioinformatics Journal"},{"key":"2026101508112178200_mcag291-B4","doi-asserted-by":"publisher","first-page":"32","DOI":"10.1186\/jbiol90","article-title":"Islands in the sky: the impact of Pleistocene climate cycles on biodiversity","volume":"7","author":"Baker","year":"2008","journal-title":"Journal of Biology"},{"key":"2026101508112178200_mcag291-B5","doi-asserted-by":"publisher","first-page":"1397","DOI":"10.1111\/j.0014-3820.2003.tb00347.x","article-title":"AFLP phylogeny of Mimulus section Erythranthe and the evolution of hummingbird pollination","volume":"57","author":"Beardsley","year":"2003","journal-title":"Evolution; International Journal of Organic Evolution"},{"key":"2026101508112178200_mcag291-B6","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1111\/ddi.13461","article-title":"Intra-Alpine Islands: population genomic inference reveals high degree of isolation between freshwater spring habitats","volume":"28","author":"Blattner","year":"2022","journal-title":"Diversity & Distributions"},{"key":"2026101508112178200_mcag291-B7","doi-asserted-by":"publisher","first-page":"5114","DOI":"10.1111\/mec.14281","article-title":"Conserving threatened riparian ecosystems in the American West: precipitation gradients and river networks drive genetic connectivity and diversity in a foundation riparian tree (Populus angustifolia)","volume":"26","author":"Bothwell","year":"2017","journal-title":"Molecular Ecology"},{"key":"2026101508112178200_mcag291-B8","doi-asserted-by":"publisher","first-page":"2576","DOI":"10.1016\/j.quascirev.2008.08.032","article-title":"Evidence for multiple refugia at different time scales during Pleistocene climatic oscillations in southern Australia inferred from phylogeography","volume":"27","author":"Byrne","year":"2008","journal-title":"Quaternary Science Reviews"},{"key":"2026101508112178200_mcag291-B9","doi-asserted-by":"publisher","first-page":"935","DOI":"10.1007\/s10592-022-01457-3","article-title":"Islands in the desert: assessing fine scale population genomic variation of a group of imperiled desert fishes","volume":"23","author":"Campbell","year":"2022","journal-title":"Conservation Genetics (Print)"},{"key":"2026101508112178200_mcag291-B10","doi-asserted-by":"publisher","DOI":"10.1002\/ecs2.2155","article-title":"Springs as hydrologic refugia in a changing climate? 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