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To investigate the physiological determinants underlying DP in gilts, transcriptomic data from tissues relevant to estrus and puberty, such as mediobasal hypothalamus, anterior pituitary gland, ovarian cortex, olfactory bulb, amygdala, and hippocampus, were obtained from age-matched DP (n\u2009=\u20098) and cyclic control gilts at follicular phase (n\u2009=\u20098) and luteal phase (n\u2009=\u20098) of the estrous cycle. A gene expression module analysis via three-way gene\u2009\u00d7\u2009individual\u2009\u00d7\u2009tissue clustering using tensor decomposition identified pituitary and ovary gene modules contributing to regulation of pubertal development. Analysis of gene expression in the hypothalamic\u2013pituitary\u2013ovary axis identified reduced expression of hypothalamic genes critical for stimulating gonadotropin secretion (KISS1 and TAC3) and reduced expression of LHB in the anterior pituitary of DP gilts compared with their cyclic counterparts. Consequently, luteinizing hormone-induced genes in the ovary important for folliculogenesis (OXTR, RUNX2, and PTX3) were less expressed in DP gilts. Other intrafollicular genes (AHR, PTGS2, PTGFR, and IGFBP7) and genes in the steroidogenesis pathways (STAR and CYP11A1) necessary to complete the ovulatory cascade were also less expressed in DP gilts. This is the first clustering of multi-tissue expression data from DP and cyclic gilts to identify genes differentially expressed in gilts of similar ages but at different levels of sexual development. A critical lack of gonadotropin support and reduced ovarian responsiveness underlie DP in gilts.<\/jats:p>","DOI":"10.1093\/biolre\/ioad145","type":"journal-article","created":{"date-parts":[[2023,10,20]],"date-time":"2023-10-20T17:21:06Z","timestamp":1697822466000},"page":"261-274","source":"Crossref","is-referenced-by-count":8,"title":["Clustering of multi-tissue transcriptomes in gilts with normal cyclicity or delayed puberty reveals genes related to pubertal development"],"prefix":"10.1093","volume":"110","author":[{"given":"Hiruni R","family":"Wijesena","sequence":"first","affiliation":[{"name":"USDA, ARS, US Meat Animal Research Center , Clay Center, NE , USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Brittney N","family":"Keel","sequence":"additional","affiliation":[{"name":"USDA, ARS, US Meat Animal Research Center , Clay Center, NE , USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dan J","family":"Nonneman","sequence":"additional","affiliation":[{"name":"USDA, ARS, US Meat Animal Research Center , Clay Center, NE , USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Robert A","family":"Cushman","sequence":"additional","affiliation":[{"name":"USDA, ARS, US Meat Animal Research Center , Clay Center, NE , USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Clay A","family":"Lents","sequence":"additional","affiliation":[{"name":"USDA, ARS, US Meat Animal Research Center , Clay Center, NE , USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2023,10,23]]},"reference":[{"key":"2024021704091801500_ref1","doi-asserted-by":"crossref","DOI":"10.1093\/jas\/skab372","article-title":"Gene expression in the amygdala and hippocampus of cyclic and acyclic gilts","volume":"100","author":"Wijesena","year":"2022","journal-title":"J Anim 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