{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T12:18:47Z","timestamp":1791893927999,"version":"4.3.4"},"reference-count":61,"publisher":"Oxford University Press (OUP)","issue":"12","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017,12,1]]},"DOI":"10.1093\/femsec\/fix141","type":"journal-article","created":{"date-parts":[[2017,11,15]],"date-time":"2017-11-15T04:14:17Z","timestamp":1510719257000},"source":"Crossref","is-referenced-by-count":12,"title":["A switch of chlorinated substrate causes emergence of a previously undetected native Dehalobacter population in an established Dehalococcoides-dominated chloroethene-dechlorinating enrichment culture"],"prefix":"10.1093","volume":"93","author":[{"given":"Luz A.","family":"Puentes J\u00e1come","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Elizabeth A.","family":"Edwards","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2017,10,27]]},"reference":[{"key":"key\n\t\t\t\t20171130142007_bib1","doi-asserted-by":"crossref","first-page":"131","DOI":"10.1016\/S0923-2508(02)01298-6","article-title":"Microbial transformation of chlorinated benzenes under anaerobic conditions","volume":"153","year":"2002","journal-title":"Res Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib2","volume-title":"Organohalide-Respiring Bacteria","year":"2016"},{"key":"key\n\t\t\t\t20171130142007_bib3","doi-asserted-by":"crossref","first-page":"496","DOI":"10.1128\/AEM.64.2.496-503.1998","article-title":"Physiological characterization of a bacterial consortium reductively dechlorinating 1,2,3- and 1,2,4-trichlorobenzene","volume":"64","year":"1998","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib4","doi-asserted-by":"crossref","first-page":"7717","DOI":"10.1128\/AEM.01649-07","article-title":"Identification of a chlorobenzene reductive dehalogenase in Dehalococcoides sp. strain CBDB1.","volume":"73","year":"2007","journal-title":"Appl Environ Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib5","doi-asserted-by":"crossref","first-page":"580","DOI":"10.1038\/35046063","article-title":"Bacterial dehalorespiration with chlorinated benzenes","volume":"408","year":"2000","journal-title":"Nature"},{"key":"key\n\t\t\t\t20171130142007_bib6","first-page":"558","article-title":"Isolation and characterization of Dehalobacter sp. strain TeCB1 including identification of TcbA: a novel tetra- and trichlorobenzene reductive dehalogenase","volume":"8","year":"2017","journal-title":"Front Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib7","volume-title":"Agency for Toxic Substances and Disease Registry's Substance Priority List","author":"ASTDR","year":"2017"},{"key":"key\n\t\t\t\t20171130142007_bib8","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1126\/science.1258118","article-title":"Structural basis for organohalide respiration","volume":"346","year":"2014","journal-title":"Science"},{"key":"key\n\t\t\t\t20171130142007_bib9","doi-asserted-by":"crossref","first-page":"2670","DOI":"10.1111\/j.1462-2920.2008.01688.x","article-title":"Enrichment of a dioxin-dehalogenating Dehalococcoides species in two-liquid phase cultures","volume":"10","year":"2008","journal-title":"Environ Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib10","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1038\/nmeth.f.303","article-title":"QIIME allows analysis of high-throughput community sequencing data","volume":"7","year":"2010","journal-title":"Nat Methods"},{"key":"key\n\t\t\t\t20171130142007_bib11","doi-asserted-by":"crossref","first-page":"51","DOI":"10.1111\/j.1574-6941.2002.tb00994.x","article-title":"Enhancement of microbial PCB dechlorination by chlorobenzoates, chlorophenols and chlorobenzenes","volume":"42","year":"2002","journal-title":"FEMS Microbiol Ecol"},{"key":"key\n\t\t\t\t20171130142007_bib12","doi-asserted-by":"crossref","first-page":"538","DOI":"10.1111\/j.1574-6941.2006.00191.x","article-title":"Microbial composition of chlorinated ethene-degrading cultures dominated by Dehalococcoides","volume":"58","year":"2006","journal-title":"FEMS Microbiol Ecol"},{"key":"key\n\t\t\t\t20171130142007_bib13","doi-asserted-by":"crossref","first-page":"2303","DOI":"10.1021\/es062010r","article-title":"Growth and yields of dechlorinators, acetogens, and methanogens during reductive dechlorination of chlorinated ethenes and dihaloelimination of 1,2-dichloroethane","volume":"41","year":"2007","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib14","doi-asserted-by":"crossref","first-page":"5538","DOI":"10.1128\/AEM.70.9.5538-5545.2004","article-title":"Characterization of a highly enriched Dehalococcoides-containing culture that grows on vinyl chloride and trichloroethene","volume":"70","year":"2004","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib15","doi-asserted-by":"crossref","first-page":"4193","DOI":"10.1016\/S0043-1354(02)00151-3","article-title":"Comparison of anaerobic dechlorinating enrichment cultures maintained on tetrachloroethene, trichloroethene, cis-dichloroethene and vinyl chloride","volume":"36","year":"2002","journal-title":"Water Res"},{"key":"key\n\t\t\t\t20171130142007_bib16","doi-asserted-by":"crossref","first-page":"2460","DOI":"10.1093\/bioinformatics\/btq461","article-title":"Search and clustering orders of magnitude faster than BLAST","volume":"26","year":"2010","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171130142007_bib17","doi-asserted-by":"crossref","first-page":"2194","DOI":"10.1093\/bioinformatics\/btr381","article-title":"UCHIME improves sensitivity and speed of chimera detection","volume":"27","year":"2011","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t20171130142007_bib18","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1128\/aem.60.1.313-322.1994","article-title":"Anaerobic degradation of toluene and O-xylene by a methanogenic consortium","volume":"60","year":"1994","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib19","doi-asserted-by":"crossref","first-page":"2075","DOI":"10.1021\/es034989b","article-title":"Dehalococcoides ethenogenes strain 195 reductively dechlorinates diverse chlorinated aromatic pollutants","volume":"38","year":"2004","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib20","doi-asserted-by":"crossref","first-page":"463","DOI":"10.1007\/s10532-007-9155-1","article-title":"Microbial degradation of chlorinated benzenes","volume":"19","year":"2008","journal-title":"Biodegradation"},{"key":"key\n\t\t\t\t20171130142007_bib21","doi-asserted-by":"crossref","first-page":"2302","DOI":"10.1021\/es802131d","article-title":"Reductive dehalogenation of dichlorobenzenes and monochlorobenzene to benzene in microcosms.","volume":"43","year":"2009","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib22","doi-asserted-by":"crossref","first-page":"428","DOI":"10.1128\/AEM.72.1.428-436.2006","article-title":"Growth of Dehalobacter and Dehalococcoides spp. during degradation of chlorinated ethanes","volume":"72","year":"2006","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib23","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1016\/j.envpol.2003.10.029","article-title":"Attenuation reactions in a multiple contaminated aquifer in Bitterfeld (Germany)","volume":"129","year":"2004","journal-title":"Environ Pollut"},{"key":"key\n\t\t\t\t20171130142007_bib24","doi-asserted-by":"crossref","first-page":"2999","DOI":"10.1128\/AEM.69.5.2999-3001.2003","article-title":"Reductive dehalogenation of chlorobenzene congeners in cell extracts of Dehalococcoides sp. strain CBDB1","volume":"69","year":"2003","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib25","first-page":"1","article-title":"Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: the role of the non-dechlorinating community","volume":"13","year":"2012","journal-title":"BMC Genomics"},{"key":"key\n\t\t\t\t20171130142007_bib26","doi-asserted-by":"crossref","first-page":"20120322","DOI":"10.1098\/rstb.2012.0322","article-title":"Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases","volume":"368","year":"2013","journal-title":"Philos T Roy Soc B"},{"key":"key\n\t\t\t\t20171130142007_bib27","doi-asserted-by":"crossref","first-page":"411","DOI":"10.1007\/s00203-003-0607-7","article-title":"Dehalorespiration with hexachlorobenzene and pentachlorobenzene by Dehalococcoides sp. strain CBDB1","volume":"180","year":"2003","journal-title":"Arch Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib28","first-page":"1","article-title":"Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction","volume":"12","year":"2012","journal-title":"BMC Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib29","doi-asserted-by":"crossref","first-page":"4549","DOI":"10.1016\/j.watres.2009.08.003","article-title":"PCB dechlorination enhancement in Anacostia River sediment microcosms","volume":"43","year":"2009","journal-title":"Water Res"},{"key":"key\n\t\t\t\t20171130142007_bib30","doi-asserted-by":"crossref","first-page":"1269","DOI":"10.1038\/nbt1131","article-title":"Genome sequence of the chlorinated compound respiring bacterium Dehalococcoides species strain CBDB1.","volume":"23","year":"2005","journal-title":"Nat Biotechnol"},{"key":"key\n\t\t\t\t20171130142007_bib31","doi-asserted-by":"crossref","first-page":"20120316","DOI":"10.1098\/rstb.2012.0316","article-title":"Organohalide respiration: microbes breathing chlorinated molecules","volume":"368","year":"2013","journal-title":"Philos T Roy Soc B"},{"key":"key\n\t\t\t\t20171130142007_bib32","doi-asserted-by":"crossref","first-page":"2378","DOI":"10.1021\/es3043092","article-title":"Anaerobic conversion of chlorobenzene and benzene to CH4 and CO2 in bioaugmented microcosms.","volume":"47","year":"2013","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib33","doi-asserted-by":"crossref","first-page":"2923","DOI":"10.1111\/1462-2920.13121","article-title":"Cultivating microbial dark matter in benzene-degrading methanogenic consortia","volume":"18","year":"2016","journal-title":"Environ Microbiol"},{"key":"key\n\t\t\t\t20171130142007_bib34","doi-asserted-by":"crossref","first-page":"610","DOI":"10.1038\/ismej.2011.139","article-title":"An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea","volume":"6","year":"2012","journal-title":"ISME J"},{"key":"key\n\t\t\t\t20171130142007_bib35","doi-asserted-by":"crossref","first-page":"1270","DOI":"10.1128\/AEM.64.4.1270-1275.1998","article-title":"Reductive dechlorination of tetrachloroethene to ethene by a two-component enzyme pathway","volume":"64","year":"1998","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib36","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1007\/978-3-662-49875-0_8","article-title":"The Genus Dehalobacter","volume-title":"Organohalide-Respiring Bacteria","year":"2016"},{"key":"key\n\t\t\t\t20171130142007_bib37","doi-asserted-by":"crossref","first-page":"4628","DOI":"10.1128\/AEM.69.8.4628-4638.2003","article-title":"Characterization of the corrinoid iron-sulfur protein tetrachloroethene reductive dehalogenase of Dehalobacter restrictus","volume":"69","year":"2003","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib38","year":"2004"},{"key":"key\n\t\t\t\t20171130142007_bib39","doi-asserted-by":"crossref","first-page":"973","DOI":"10.1007\/s10532-011-9456-2","article-title":"Detection of monochlorobenzene metabolizing bacteria under anoxic conditions by DNA-stable isotope probing","volume":"22","year":"2011","journal-title":"Biodegradation"},{"key":"key\n\t\t\t\t20171130142007_bib40","doi-asserted-by":"crossref","first-page":"6806","DOI":"10.1021\/es200480k","article-title":"A role for Dehalobacter spp. in the reductive dehalogenation of dichlorobenzenes and monochlorobenzene","volume":"45","year":"2011","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib41","doi-asserted-by":"crossref","first-page":"3776","DOI":"10.1021\/es4044769","article-title":"Dehalogenation of chlorobenzenes, dichlorotoluenes, and tetrachloroethene by three Dehalobacter spp","volume":"48","year":"2014","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib42","doi-asserted-by":"crossref","first-page":"16515","DOI":"10.1074\/jbc.271.28.16515","article-title":"Purification and characterization of tetrachloroethene reductive dehalogenase from Dehalospirillum multivorans","volume":"271","year":"1996","journal-title":"J Biol Chem"},{"key":"key\n\t\t\t\t20171130142007_bib43","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/j.copbio.2015.11.009","article-title":"Anaerobic microbial dehalogenation of organohalides\u2014state of the art and remediation strategies","volume":"38","year":"2016","journal-title":"Curr Opin Biotechnol"},{"key":"key\n\t\t\t\t20171130142007_bib44","doi-asserted-by":"crossref","first-page":"3836","DOI":"10.1021\/es0621896","article-title":"Sensitive detection of anaerobic monochlorobenzene degradation using stable isotope tracers","volume":"41","year":"2007","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib45","doi-asserted-by":"crossref","first-page":"12197","DOI":"10.1021\/acs.est.6b02961","article-title":"Sediment monitored natural recovery evidenced by compound specific isotope analysis and high-resolution pore water sampling.","volume":"50","year":"2016","journal-title":"Environ Sci Technol"},{"key":"key\n\t\t\t\t20171130142007_bib46","first-page":"1","article-title":"Chlorinated electron acceptor availability selects for specific Dehalococcoides populations in dechlorinating enrichment cultures and in groundwater","volume":"175182","year":"2017"},{"key":"key\n\t\t\t\t20171130142007_bib47","doi-asserted-by":"crossref","first-page":"587","DOI":"10.1128\/AEM.02597-14","article-title":"Dehalococcoides mccartyi strain DCMB5 respires a broad spectrum of chlorinated aromatic compounds.","volume":"81","year":"2015","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib48","doi-asserted-by":"crossref","first-page":"309","DOI":"10.1007\/978-3-662-49875-0_14","article-title":"Organohalide-respiring bacteria as members of microbial communities: catabolic food webs and biochemical interactions.","volume-title":"Organohalide-Respiring Bacteria","year":"2016"},{"key":"key\n\t\t\t\t20171130142007_bib49","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1016\/j.scitotenv.2013.10.116","article-title":"Iron oxides stimulate microbial monochlorobenzene in situ transformation in constructed wetlands and laboratory systems","volume":"472","year":"2014","journal-title":"Sci Total Environ"},{"key":"key\n\t\t\t\t20171130142007_bib50","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1126\/science.1102226","article-title":"Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes","volume":"307","year":"2005","journal-title":"Science"},{"key":"key\n\t\t\t\t20171130142007_bib51","doi-asserted-by":"crossref","first-page":"224","DOI":"10.1016\/j.pep.2012.08.007","article-title":"Heterologous expression, purification and cofactor reconstitution of the reductive dehalogenase PceA from Dehalobacter restrictus","volume":"85","year":"2012","journal-title":"Protein Expr Purif"},{"key":"key\n\t\t\t\t20171130142007_bib52","doi-asserted-by":"crossref","first-page":"20120318","DOI":"10.1098\/rstb.2012.0318","article-title":"Identification of Dehalobacter reductive dehalogenases that catalyse dechlorination of chloroform, 1,1,1-trichloroethane and 1,1-dichloroethane.","volume":"368","year":"2013","journal-title":"Philos T Roy Soc B"},{"key":"key\n\t\t\t\t20171130142007_bib53","first-page":"1","article-title":"Primer3-new capabilities and interfaces","volume":"40","year":"2012","journal-title":"Nucleic Acids Res"},{"key":"key\n\t\t\t\t20171130142007_bib54","volume-title":"National Primary Drinking Water Regulations","author":"USEPA","year":"2009"},{"key":"key\n\t\t\t\t20171130142007_bib55","doi-asserted-by":"crossref","first-page":"706","DOI":"10.1111\/j.1574-6976.2006.00029.x","article-title":"The Desulfitobacterium genus","volume":"30","year":"2006","journal-title":"FEMS Microbiol Rev"},{"key":"key\n\t\t\t\t20171130142007_bib56","doi-asserted-by":"crossref","first-page":"8257","DOI":"10.1128\/AEM.71.12.8257-8264.2005","article-title":"Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing cultures","volume":"71","year":"2005","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib57","doi-asserted-by":"crossref","first-page":"626","DOI":"10.1038\/ismej.2016.158","article-title":"Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates","volume":"11","year":"2017","journal-title":"ISME J"},{"key":"key\n\t\t\t\t20171130142007_bib58","doi-asserted-by":"crossref","first-page":"5261","DOI":"10.1128\/AEM.00062-07","article-title":"Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy","volume":"73","year":"2007","journal-title":"Appl Environ Microb"},{"key":"key\n\t\t\t\t20171130142007_bib59","volume-title":"Health Canada Guidelines for Canadian Drinking Water Quality - Summary Table","author":"Water and Air Quality Bureau Health Canada","year":"2017"},{"key":"key\n\t\t\t\t20171130142007_bib60","doi-asserted-by":"crossref","first-page":"697","DOI":"10.1128\/jb.173.2.697-703.1991","article-title":"16S ribosomal DNA amplification for phylogenetic study","volume":"173","year":"1991","journal-title":"J Bacteriol"},{"key":"key\n\t\t\t\t20171130142007_bib61","doi-asserted-by":"crossref","first-page":"3092","DOI":"10.1111\/1462-2920.13287","article-title":"Isolation and characterization of Dehalobacter sp. strain UNSWDHB capable of chloroform and chlorinated ethane respiration","volume":"18","year":"2016","journal-title":"Environ Microbiol"}],"container-title":["FEMS Microbiology Ecology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/femsec\/article-pdf\/93\/12\/fix141\/21860826\/fix141.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,8,7]],"date-time":"2022-08-07T10:09:21Z","timestamp":1659866961000},"score":1,"resource":{"primary":{"URL":"http:\/\/academic.oup.com\/femsec\/article\/doi\/10.1093\/femsec\/fix141\/4569067"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,10,27]]},"references-count":61,"journal-issue":{"issue":"12","published-online":{"date-parts":[[2017,10,27]]},"published-print":{"date-parts":[[2017,12,1]]}},"URL":"https:\/\/doi.org\/10.1093\/femsec\/fix141","relation":{},"ISSN":["1574-6941"],"issn-type":[{"value":"1574-6941","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2017,12]]},"published":{"date-parts":[[2017,10,27]]}}}