{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,19]],"date-time":"2025-12-19T15:40:02Z","timestamp":1766158802037,"version":"3.41.2"},"reference-count":54,"publisher":"Oxford University Press (OUP)","issue":"1","license":[{"start":{"date-parts":[[2021,10,25]],"date-time":"2021-10-25T00:00:00Z","timestamp":1635120000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100010269","name":"Wellcome Trust","doi-asserted-by":"publisher","award":["109167\/Z\/15\/Z"],"award-info":[{"award-number":["109167\/Z\/15\/Z"]}],"id":[{"id":"10.13039\/100010269","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001602","name":"Science Foundation Ireland","doi-asserted-by":"publisher","award":["19\/FFP\/6668"],"award-info":[{"award-number":["19\/FFP\/6668"]}],"id":[{"id":"10.13039\/501100001602","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"crossref","award":["RO-5328\/2"],"award-info":[{"award-number":["RO-5328\/2"]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"crossref"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"crossref","award":["R01 AI093808","R21 AI156157","P30 CA008748"],"award-info":[{"award-number":["R01 AI093808","R21 AI156157","P30 CA008748"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"crossref"}]},{"name":"Ludwig Center for Cancer Immunotherapy"},{"name":"Susan and Peter Solomon Divisional Genomics Program"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2022,1,4]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Candida metapsilosis is a member of the Candida parapsilosis species complex, a group of opportunistic human pathogens. Of all the members of this complex, C. metapsilosis is the least virulent, and accounts for a small proportion of invasive Candida infections. Previous studies established that all C. metapsilosis isolates are hybrids, originating from a single hybridization event between two lineages, parent A and parent B. Here, we use MinION and Illumina sequencing to characterize a C. metapsilosis isolate that originated from a separate hybridization. One of the parents of the new isolate is very closely related to parent A. However, the other parent (parent C) is not the same as parent B. Unlike C. metapsilosis AB isolates, the C. metapsilosis AC isolate has not undergone introgression at the mating type-like locus. In addition, the A and C haplotypes are not fully collinear. The C. metapsilosis AC isolate has undergone loss of heterozygosity with a preference for haplotype A, indicating that this isolate is in the early stages of genome stabilization.<\/jats:p>","DOI":"10.1093\/g3journal\/jkab367","type":"journal-article","created":{"date-parts":[[2021,10,25]],"date-time":"2021-10-25T14:21:24Z","timestamp":1635171684000},"source":"Crossref","is-referenced-by-count":13,"title":["Identification of a novel <i>Candida metapsilosis<\/i> isolate reveals multiple hybridization events"],"prefix":"10.1093","volume":"12","author":[{"given":"Caoimhe E","family":"O\u2019Brien","sequence":"first","affiliation":[{"name":"School of Biomolecular and Biomedical Science, Conway Institute, University College Dublin , Dublin 4, Ireland"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bing","family":"Zhai","sequence":"additional","affiliation":[{"name":"Infectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center , New York, NY 10065, USA"},{"name":"Immunology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center , New York, NY 10065, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mihaela","family":"Ola","sequence":"additional","affiliation":[{"name":"School of Biomolecular and Biomedical Science, Conway Institute, University College Dublin , Dublin 4, Ireland"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sean A","family":"Bergin","sequence":"additional","affiliation":[{"name":"School of Biomolecular and Biomedical Science, Conway Institute, University College Dublin , Dublin 4, Ireland"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3148-842X","authenticated-orcid":false,"given":"Eoin","family":"\u00d3 Cinn\u00e9ide","sequence":"additional","affiliation":[{"name":"School of Medicine, Conway Institute, University College Dublin , Dublin 4, 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Center , New York, NY 10065, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"N Esther","family":"Babady","sequence":"additional","affiliation":[{"name":"Infectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center , New York, NY 10065, USA"},{"name":"Immunology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center , New York, NY 10065, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9097-5412","authenticated-orcid":false,"given":"Tobias M","family":"Hohl","sequence":"additional","affiliation":[{"name":"Infectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center , New York, NY 10065, USA"},{"name":"Immunology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center , New York, NY 10065, USA"},{"name":"Department of Medicine, Weill Cornell Medical College , New York, NY 10007, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1770-5301","authenticated-orcid":false,"given":"Geraldine","family":"Butler","sequence":"additional","affiliation":[{"name":"School of Biomolecular and Biomedical Science, Conway Institute, University College Dublin , Dublin 4, Ireland"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2021,10,25]]},"reference":[{"key":"2024042309072593400_jkab367-B1","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing","volume":"19","author":"Bankevich","year":"2012","journal-title":"J Comput Biol"},{"key":"2024042309072593400_jkab367-B2","doi-asserted-by":"crossref","first-page":"98","DOI":"10.1016\/j.ijmm.2012.12.006","article-title":"Comparison of Candida parapsilosis, Candida orthopsilosis, and Candida metapsilosis 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