{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,3]],"date-time":"2026-11-03T03:03:09Z","timestamp":1793674989344,"version":"4.5.1"},"reference-count":74,"publisher":"Oxford University Press (OUP)","issue":"3","license":[{"start":{"date-parts":[[2024,12,31]],"date-time":"2024-12-31T00:00:00Z","timestamp":1735603200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"Institutional Development Award"},{"name":"National Institute of Health\u2019s"},{"DOI":"10.13039\/100000057","name":"National Institute of General Medical Sciences","doi-asserted-by":"publisher","award":["P20GM103446"],"award-info":[{"award-number":["P20GM103446"]}],"id":[{"id":"10.13039\/100000057","id-type":"DOI","asserted-by":"publisher"}]},{"name":"University of Delaware CBCB Bioinformatics Data Science Core Facility","award":["RRID:SCR_017696"],"award-info":[{"award-number":["RRID:SCR_017696"]}]},{"DOI":"10.13039\/100013429","name":"Delaware INBRE","doi-asserted-by":"publisher","award":["NIGMS P20 GM103446"],"award-info":[{"award-number":["NIGMS P20 GM103446"]}],"id":[{"id":"10.13039\/100013429","id-type":"DOI","asserted-by":"publisher"}]},{"name":"NIH Shared Instrumentation","award":["S10 OD028725"],"award-info":[{"award-number":["S10 OD028725"]}]},{"DOI":"10.13039\/100025212","name":"State of Delaware","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100025212","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100017014","name":"Delaware Biotechnology Institute","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100017014","id-type":"DOI","asserted-by":"publisher"}]},{"name":"USDA Hatch","award":["DEL00854"],"award-info":[{"award-number":["DEL00854"]}]},{"name":"USDA Hatch","award":["NE1943"],"award-info":[{"award-number":["NE1943"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025,3,18]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>Triatoma sanguisuga is the most widespread triatomine bug species in the United States. The species vectors the human parasite Trypanosoma cruzi, which causes Chagas disease. Vector-borne Chagas disease is rarely diagnosed in the United States, but T. sanguisuga has been implicated in a handful of cases. Despite its public health importance, little is known about the genomics or population genetics of T. sanguisuga. Here, we used long-read sequencing to assemble the first whole-genome sequence for T. sanguisuga using DNA extracted from 1 adult specimen from Delaware. The final size of the genome was 1.162\u2005Gb with 77.7\u00d7 coverage. The assembly consisted of 183 contigs with an N50 size of 94.97\u2005kb. The Benchmarking Universal Single-Copy Ortholog complete score was 99.1%, suggesting a very complete assembly. Genome-wide GC content was 33.56%, and DNA methylation was 18.84%. The genome consists of 62.75% repetitive DNAs and 17,799 predicted coding genes. The assembled T. sanguisuga genome was very close in size and BUSCO score to that of Triatominae species T. dimidiata (1.16\u2005Gb with 99.1% BUSCO score for T. sanguisuga vs 1.22\u2005Gb with 98.7% BUSCO score for T. dimidiata) and slightly larger than that of T. infestans and Rhodnius prolixus (949\u2005Mb with 90.4% BUSCO score and 706\u2005Mb with 96.5% BUSCO score, respectively). The T. sanguisuga genome is the first North American triatomine species genome to be sequenced, allowing for deeper investigations into epidemiologically relevant aspects of triatomines in temperate climates, thus providing potential vector-borne disease management targets and strengthening public health preparedness.<\/jats:p>","DOI":"10.1093\/g3journal\/jkae308","type":"journal-article","created":{"date-parts":[[2024,12,31]],"date-time":"2024-12-31T01:02:45Z","timestamp":1735606965000},"source":"Crossref","is-referenced-by-count":5,"title":["First whole-genome sequence of\n                    <i>Triatoma sanguisuga<\/i>\n                    (Le Conte, 1855), vector of Chagas disease"],"prefix":"10.1093","volume":"15","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-0274-6143","authenticated-orcid":false,"given":"Jennifer K","family":"Peterson","sequence":"first","affiliation":[{"name":"Department of Entomology and Wildlife Ecology, University of Delaware , Newark, DE 19716 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5590-1365","authenticated-orcid":false,"given":"Madolyn L","family":"MacDonald","sequence":"additional","affiliation":[{"name":"Bioinformatics and Computational Biology Core, University of Delaware , Newark, DE 19716 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vincenzo A","family":"Ellis","sequence":"additional","affiliation":[{"name":"Department of Entomology and Wildlife Ecology, University of Delaware , Newark, DE 19716 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2024,12,31]]},"reference":[{"issue":"3","key":"2025031817094985800_jkae308-B1","doi-asserted-by":"publisher","first-page":"437","DOI":"10.1590\/S0001-37652005000300007","article-title":"Molecular research and the control of Chagas disease vectors","volume":"77","author":"Abad-Franch","year":"2005","journal-title":"An Acad Bras Ci\u00eanc"},{"issue":"12","key":"2025031817094985800_jkae308-B2","doi-asserted-by":"publisher","first-page":"1627","DOI":"10.3390\/pathogens10121627","article-title":"Trends in taxonomy of Chagas disease vectors (Hemiptera, Reduviidae, Triatominae): from Linnaean to integrative taxonomy","volume":"10","author":"Alevi","year":"2021","journal-title":"Pathogens"},{"issue":"3","key":"2025031817094985800_jkae308-B3","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J Mol Biol."},{"issue":"Database issue","key":"2025031817094985800_jkae308-B4","doi-asserted-by":"publisher","first-page":"D115","DOI":"10.1093\/nar\/gkh131","article-title":"UniProt: the universal protein 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the Americas","author":"Carcavallo","year":"1998"},{"key":"2025031817094985800_jkae308-B15","author":"Centers for Disease Control and Prevention"},{"issue":"5","key":"2025031817094985800_jkae308-B16","doi-asserted-by":"publisher","first-page":"1091","DOI":"10.1603\/ME10195","article-title":"High Trypanosoma cruzi (Kinetoplastida: Trypanosomatidae) prevalence in Triatoma sanguisuga (Hemiptera: Redviidae) in Southeastern Louisiana","volume":"48","author":"Cesa","year":"2011","journal-title":"J Med Entomol"},{"issue":"2","key":"2025031817094985800_jkae308-B17","doi-asserted-by":"publisher","first-page":"170","DOI":"10.1038\/s41592-020-01056-5","article-title":"Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm","volume":"18","author":"Cheng","year":"2021","journal-title":"Nat Methods"},{"issue":"3","key":"2025031817094985800_jkae308-B18","doi-asserted-by":"publisher","first-page":"277","DOI":"10.1590\/0074-0276140362","article-title":"The main sceneries of 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The vectors, blood and oral transmissions\u2014a comprehensive review","volume":"110","author":"Coura","year":"2015","journal-title":"Mem Inst Oswaldo Cruz"},{"key":"2025031817094985800_jkae308-B19","doi-asserted-by":"publisher","first-page":"171","DOI":"10.1016\/j.meegid.2017.12.016","article-title":"Analysis of over 1500 triatomine vectors from across the US, predominantly Texas, for Trypanosoma cruzi infection and discrete typing units","volume":"58","author":"Curtis-Robles","year":"2018","journal-title":"Infect Genet Evol."},{"issue":"5","key":"2025031817094985800_jkae308-B20","doi-asserted-by":"publisher","first-page":"btad311","DOI":"10.1093\/bioinformatics\/btad311","article-title":"NanoPack2: population-scale evaluation of long-read sequencing data","volume":"39","author":"De 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Zool"},{"issue":"7","key":"2025031817094985800_jkae308-B49","doi-asserted-by":"publisher","first-page":"591","DOI":"10.3390\/insects13070591","article-title":"Triatoma guazu Lent and Wygodzinsky is a junior synonym of Triatoma williami Galv\u00e3o, Souza and Lima","volume":"13","author":"Oliveira Correia","year":"2022","journal-title":"Insects"},{"issue":"3","key":"2025031817094985800_jkae308-B50","doi-asserted-by":"publisher","first-page":"526","DOI":"10.1093\/bioinformatics\/bty633","article-title":"Ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R","volume":"35","author":"Paradis","year":"2019","journal-title":"Bioinformatics"},{"issue":"2","key":"2025031817094985800_jkae308-B51","doi-asserted-by":"publisher","first-page":"76","DOI":"10.1007\/s40475-019-00175-0","article-title":"Chagas disease in Central America: recent findings and current challenges in vector ecology and control","volume":"6","author":"Peterson","year":"2019","journal-title":"Curr 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