{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,18]],"date-time":"2026-10-18T08:49:55Z","timestamp":1792313395234,"version":"4.4.0"},"reference-count":69,"publisher":"Oxford University Press (OUP)","issue":"4","license":[{"start":{"date-parts":[[2022,9,20]],"date-time":"2022-09-20T00:00:00Z","timestamp":1663632000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004794","name":"Centre National de la Recherche Scientifique","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100004794","id-type":"DOI","asserted-by":"publisher"}]},{"name":"France-Mexico collaborative research","award":["M16SO1\/276330"],"award-info":[{"award-number":["M16SO1\/276330"]}]},{"DOI":"10.13039\/501100007350","name":"Consejo Nacional de Ciencia y Tecnolog\u00eda, Guatemala","doi-asserted-by":"publisher","award":["CB-2017-2018-A1-S-24868"],"award-info":[{"award-number":["CB-2017-2018-A1-S-24868"]}],"id":[{"id":"10.13039\/501100007350","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2023,1,27]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>The large DMD gene encodes a group of dystrophin proteins in brain and retina, produced from multiple promoters and alternative splicing events. Dystrophins are core components of different scaffolding complexes in distinct cell types. Their absence may thus alter several cellular pathways, which might explain the heterogeneous genotype\u2013phenotype relationships underlying central comorbidities in Duchenne muscular dystrophy (DMD). However, the cell-specific expression of dystrophins and associated proteins (DAPs) is still largely unknown. The present study provides a first RNA-Seq-based reference showing tissue- and cell-specific differential expression of dystrophins, splice variants and DAPs in mouse brain and retina. We report that a cell type may express several dystrophin complexes, perhaps due to expression in separate cell subdomains and\/or subpopulations, some of which with differential expression at different maturation stages. We also identified new splicing events in addition to the common exon-skipping events. These include a new exon within intron 51 (E51b) in frame with the flanking exons in retina, as well as inclusions of intronic sequences with stop codons leading to the presence of transcripts with elongated exons 40 and\/or 41 (E40e, E41e) in both retina and brain. PCR validations revealed that the new exons may affect several dystrophins. Moreover, immunoblot experiments using a combination of specific antibodies and dystrophin-deficient mice unveiled that the transcripts with stop codons are translated into truncated proteins lacking their C-terminus, which we called N-Dp427 and N-Dp260. This study thus uncovers a range of new findings underlying the complex neurobiology of DMD.<\/jats:p>","DOI":"10.1093\/hmg\/ddac236","type":"journal-article","created":{"date-parts":[[2022,9,19]],"date-time":"2022-09-19T13:48:39Z","timestamp":1663595319000},"page":"659-676","source":"Crossref","is-referenced-by-count":29,"title":["Tissue- and cell-specific whole-transcriptome meta-analysis from brain and retina reveals differential expression of dystrophin complexes and new dystrophin spliced isoforms"],"prefix":"10.1093","volume":"32","author":[{"given":"C\u00e9sar","family":"Garc\u00eda-Cruz","sequence":"first","affiliation":[{"name":"Departamento de Gen\u00e9tica y Biolog\u00eda Molecular, Centro de Investigaci\u00f3n y de Estudios Avanzados del IPN , 07360 Ciudad de M\u00e9xico , Mexico"},{"name":"Institut des Neurosciences Paris Saclay, Universit\u00e9 Paris-Saclay, CNRS , 91400 Saclay , France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jorge","family":"Arag\u00f3n","sequence":"additional","affiliation":[{"name":"Departamento de Gen\u00e9tica y Biolog\u00eda Molecular, Centro de Investigaci\u00f3n y de Estudios Avanzados del IPN , 07360 Ciudad de M\u00e9xico , Mexico"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sophie","family":"Lourdel","sequence":"additional","affiliation":[{"name":"Institut des Neurosciences Paris Saclay, Universit\u00e9 Paris-Saclay, CNRS , 91400 Saclay , France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ahrmad","family":"Annan","sequence":"additional","affiliation":[{"name":"Institut des Neurosciences Paris Saclay, Universit\u00e9 Paris-Saclay, CNRS , 91400 Saclay , France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"J\u00e9r\u00f4me E","family":"Roger","sequence":"additional","affiliation":[{"name":"Institut des Neurosciences Paris Saclay, Universit\u00e9 Paris-Saclay, CNRS , 91400 Saclay , France"},{"name":"CERTO-Retina France , 91400 Saclay , France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cecilia","family":"Montanez","sequence":"additional","affiliation":[{"name":"Departamento de Gen\u00e9tica y Biolog\u00eda Molecular, Centro de Investigaci\u00f3n y de Estudios Avanzados del IPN , 07360 Ciudad de M\u00e9xico , Mexico"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8783-8185","authenticated-orcid":false,"given":"Cyrille","family":"Vaillend","sequence":"additional","affiliation":[{"name":"Institut des Neurosciences Paris Saclay, Universit\u00e9 Paris-Saclay, CNRS , 91400 Saclay , France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2022,9,20]]},"reference":[{"key":"2023020311101444200_ref1","doi-asserted-by":"crossref","first-page":"487","DOI":"10.1016\/j.tins.2012.04.004","article-title":"The dystrophin-glycoprotein complex in brain development and disease","volume":"35","author":"Waite","year":"2012","journal-title":"Trends Neurosci."},{"key":"2023020311101444200_ref2","first-page":"849426","article-title":"Dystrophins, utrophins, and associated scaffolding complexes: role in mammalian brain and implications for therapeutic strategies","volume":"2010","author":"Perronnet","year":"2010","journal-title":"J. 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