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In this study, we characterized the dynamic transcriptomic profiles of liver tissues in goat kids from birth to post-weaning (1\u2009d, 2\u2009wk, 4\u2009wk, 8\u2009wk, and 12\u2009wk of age) to elucidate the competing endogenous RNA (ceRNA) regulatory network underlying metabolic adaptation. Weighted gene co-expression network analysis revealed that differentially expressed genes, including PPARG, FASN, FABP3, SCD, ELOVL5, and ELOVL6, were significantly enriched in the PPAR signaling pathway and fatty acid biosynthesis pathway and exhibited high expression during the suckling period. This expression pattern suggests active hepatic lipogenesis supporting rapid growth in suckling kids, while the reliance on endogenous lipid synthesis decreased after weaning. Additionally, we identified 567 differentially expressed long non-coding RNAs (DELs). Among these, target genes of DELs in Cluster 12 and Cluster 14 were significantly enriched in immune-related pathways, such as NF-\u03baB and Th17 cell differentiation. Their dynamic expression patterns suggest potential roles in mediating the transition from passive to active immunity and in responding to weaning stress. Furthermore, a lipid metabolism-associated ceRNA network was constructed, including miR-154b-3p\/miR-197-3p-ACACB-MSTRG.10418.2 and miR-497-5p-FASN-MSTRG.9465.3 axes. The targeting relationship within the miR-497-5p-FASN-MSTRG.9465.3 axis was experimentally validated. These findings provide novel insights into the regulatory mechanisms underlying early liver development and metabolic adaptation in ruminants.<\/jats:p>","DOI":"10.1093\/jas\/skag061","type":"journal-article","created":{"date-parts":[[2026,2,23]],"date-time":"2026-02-23T12:22:01Z","timestamp":1771849321000},"source":"Crossref","is-referenced-by-count":0,"title":["Integrated transcriptomic characterization and ceRNA network analysis during early liver development in goat kids"],"prefix":"10.1093","volume":"104","author":[{"given":"Qing","family":"Li","sequence":"first","affiliation":[{"name":"Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]},{"name":"Key Laboratory of Efficient Utilization of Non-grain Feed Resources (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Qingling","family":"Duan","sequence":"additional","affiliation":[{"name":"Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]},{"name":"Key Laboratory of Efficient Utilization of Non-grain Feed Resources (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jianmin","family":"Wang","sequence":"additional","affiliation":[{"name":"Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]},{"name":"Key Laboratory of Efficient Utilization of Non-grain Feed Resources (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiaqing","family":"Hu","sequence":"additional","affiliation":[{"name":"Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]},{"name":"Key Laboratory of Efficient Utilization of Non-grain Feed Resources (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tianle","family":"Chao","sequence":"additional","affiliation":[{"name":"Shandong Provincial Key laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]},{"name":"Key Laboratory of Efficient Utilization of Non-grain Feed Resources (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, College of Animal Science and Technology, Shandong Agricultural University , Tai\u2019an City, Shandong Province 271014,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2026,2,25]]},"reference":[{"key":"2026050719112981000_skag061-B1","doi-asserted-by":"publisher","first-page":"268","DOI":"10.1007\/s11033-024-09268-0","article-title":"Comprehensive evaluation and validation of optimal reference genes for normalization of qPCR data in different caprine tissues","volume":"51","author":"Ahlawat","year":"2024","journal-title":"Mol Biol Rep"},{"key":"2026050719112981000_skag061-B2","doi-asserted-by":"publisher","DOI":"10.3390\/ani11102870","article-title":"Transcriptional reprogramming in rumen epithelium during the developmental transition of Pre-Ruminant to the ruminant in cattle","volume":"11","author":"Baldwin Vi","year":"2021","journal-title":"Animals. 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