{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,11]],"date-time":"2026-06-11T16:48:18Z","timestamp":1781196498939,"version":"3.54.1"},"reference-count":41,"publisher":"Oxford University Press (OUP)","issue":"2","license":[{"start":{"date-parts":[[2025,2,1]],"date-time":"2025-02-01T00:00:00Z","timestamp":1738368000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"DOI":"10.13039\/501100004366","name":"Tabriz University of Medical Sciences","doi-asserted-by":"publisher","award":["70792"],"award-info":[{"award-number":["70792"]}],"id":[{"id":"10.13039\/501100004366","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025,2,3]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Colorectal cancer (CRC) involves uncontrolled cell growth in the colon and rectum. This study aims to explore the prevalence of key pathogenic bacteria and their role in the progression of CRC, focusing on microbial dysbiosis. This study analyzed 52 stool and tissue samples through polymerase chain reaction (PCR), real-time PCR, and bioinformatics to identify associations between pathogenic bacteria and CRC progression. PCR results revealed a significant association between the Bacteroides fragilis toxin (bft) gene and CRC progression (P\u00a0=\u00a00.001, r\u00a0=\u00a00.570). Furthermore, Real-time PCR showed significant differences in the frequency of pks+Escherichia coli in CRC stages 1 (P\u00a0=\u00a00.03), 2 (P\u00a0=\u00a00.004), and 3 (P\u00a0=\u00a00.0002) compared to the control group. Additionally, the frequency of Fusobacterium nucleatum in stage 3 CRC patients was significantly higher than in the control group (P\u00a0=\u00a00.004) and stage 1 patients (P\u00a0=\u00a00.01). Furthermore, Streptococcus gallolyticus showed similar significant differences in stage 3 patients (P\u00a0=\u00a00.004). Bioinformatics analyses using KEGG, Reactome, STRING, and dbSNP highlighted bacteria\u2019s roles in colorectal carcinogenesis, emphasizing the need for early identification and management in CRC treatment and prevention strategies. Finally, due to the limitations of the study, the use of more advanced methods and the validation of results through more reliable techniques are essential for future research.<\/jats:p>","DOI":"10.1093\/lambio\/ovaf017","type":"journal-article","created":{"date-parts":[[2025,2,10]],"date-time":"2025-02-10T01:39:56Z","timestamp":1739151596000},"source":"Crossref","is-referenced-by-count":3,"title":["The relationship between pathogenic bacteria and different stages of colorectal cancer"],"prefix":"10.1093","volume":"78","author":[{"given":"Javad","family":"Nezhadi","sequence":"first","affiliation":[{"name":"Student Research Committee, Tabriz University of Medical Sciences , 5165665931, Tabriz ,","place":["Iran"]},{"name":"Infectious and Tropical Diseases Research Center, Tabriz University of Medical Sciences , 5165665931, Tabriz ,","place":["Iran"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hossein 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and Gastrointestinal Diseases Research Center, Tabriz University of Medical Sciences , 5165665931, Tabriz ,","place":["Iran"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Roghayeh","family":"Nouri","sequence":"additional","affiliation":[{"name":"Department of Microbiology, Faculty of Medicine, Tabriz University of Medical Sciences , 5165665931, Tabriz ,","place":["Iran"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yalda","family":"Mohammadzadeh-Asl","sequence":"additional","affiliation":[{"name":"Department of Microbiology, Faculty of Medicine, Tabriz University of Medical Sciences , 5165665931, Tabriz ,","place":["Iran"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Simin","family":"Sattarpour","sequence":"additional","affiliation":[{"name":"Department of Basic Sciences, Faculty of Allied Medical Sciences, Tabriz University of Medical Sciences , 5165665931, Tabriz 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