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We show that ALIGaToR accurately reproduces manually curated annotations and is capable of transferring labels even between distantly related species. Code and documentation for ALIGaToR, including a script reproducing all analyses in this paper, are available at https:\/\/github.com\/scharch\/aligator.<\/jats:p>","DOI":"10.1093\/oxfimm\/iqaf009","type":"journal-article","created":{"date-parts":[[2025,11,14]],"date-time":"2025-11-14T13:09:26Z","timestamp":1763125766000},"source":"Crossref","is-referenced-by-count":0,"title":["ALIGaToR: a tool for the automated annotation of immunoglobulin and T cell receptor genomic loci"],"prefix":"10.1093","volume":"6","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-2562-603X","authenticated-orcid":false,"given":"Chaim A","family":"Schramm","sequence":"first","affiliation":[{"name":"Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health , Bethesda, MD 20892,","place":["United States"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Simone","family":"Olubo","sequence":"additional","affiliation":[{"name":"Vaccine Research 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