{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,28]],"date-time":"2026-02-28T11:33:06Z","timestamp":1772278386725,"version":"3.50.1"},"reference-count":66,"publisher":"Oxford University Press (OUP)","issue":"8","license":[{"start":{"date-parts":[[2025,7,11]],"date-time":"2025-07-11T00:00:00Z","timestamp":1752192000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/pages\/standard-publication-reuse-rights"}],"funder":[{"name":"Program for Science &Technology Innovation Talents in Universities of Henan Province","award":["19HASTIT014"],"award-info":[{"award-number":["19HASTIT014"]}]},{"DOI":"10.13039\/501100006407","name":"Henan Provincial Natural Science Foundation of China","doi-asserted-by":"publisher","award":["202300410366"],"award-info":[{"award-number":["202300410366"]}],"id":[{"id":"10.13039\/501100006407","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Project of Henan Provincial Science and Technology","award":["232102111110"],"award-info":[{"award-number":["232102111110"]}]},{"name":"Project of Henan Provincial Science and Technology","award":["232102111114"],"award-info":[{"award-number":["232102111114"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025,9,13]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>Chromatin remodelling complexes like the SHPRH (sucrose non-fermenting 2 (SNF2), histone linker, plant homeodomain (PHD), really interesting new gene (RING), and helicase domains) control gene expression via ATPase and nucleosome-E3 ubiquitin ligase activities. The members of SHPRH have been shown to play substantial roles in DNA repair in mammals, while their functions remain largely unknown in plants. In this study, we further investigated a SHPRH member designated as BrCHR39 in Brassica rapa, building on earlier experimental evidence from our laboratory that highlighted its functional significance. RNA interference (RNAi)-mediated knockdown of endogenous BrCHR39 expression, consistent with our prior findings, resulted in impaired apical dominance, semi-dwarfism, and enhanced axillary bud outgrowth in B. rapa. These results confirm and extend our earlier observations. The transgenic B. rapa lines had reduced cell numbers in parenchyma due to the affected cell division in the main stem. Suppression of BrCHR39 expression resulted in a significant decrease in the expression levels of auxin-related genes, and the application of exogenous auxin sufficiently restored the apical dominance in the silenced B. rapa lines. In addition, the silencing of BrCHR39 triggered a negative regulatory expression pattern in auxin-responsive genes. Furthermore, we demonstrated that BrCHR39 interacts with BrASK18 via its F-box domain, playing a critical role in the auxin signalling pathway. Taken all together, our study provides compelling evidence that BrCHR39 positively regulates apical dominance through auxin signalling in B. rapa.<\/jats:p>","DOI":"10.1093\/pcp\/pcaf075","type":"journal-article","created":{"date-parts":[[2025,7,11]],"date-time":"2025-07-11T12:39:38Z","timestamp":1752237578000},"page":"1240-1253","source":"Crossref","is-referenced-by-count":1,"title":["The chromatin remodelling factor\n                    <i>BrCHR39<\/i>\n                    positively regulates apical dominance by auxin signalling in\n                    <i>Brassica rapa<\/i>"],"prefix":"10.1093","volume":"66","author":[{"given":"Jiayin","family":"Liu","sequence":"first","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0009-0008-0806-550X","authenticated-orcid":false,"given":"Lanlan","family":"Yang","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wei","family":"Zhu","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhaoran","family":"Tian","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhengqing","family":"Xie","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luyue","family":"Zhang","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Baoming","family":"Tian","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fang","family":"Wei","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4487-9614","authenticated-orcid":false,"given":"Gongyao","family":"Shi","sequence":"additional","affiliation":[{"name":"Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University , 100 Science Avenue, Zhengzhou 450001 ,","place":["China"]}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2025,7,11]]},"reference":[{"key":"2026022803070262300_ref1","doi-asserted-by":"crossref","first-page":"e259326","DOI":"10.1590\/1519-6984.259326","article-title":"Drought stress enhances the efficiency of floral dip method of Agrobacterium-mediated transformation in Arabidopsis thaliana","volume":"84","author":"Ali","year":"2022","journal-title":"Braz. J. Biol."},{"key":"2026022803070262300_ref2","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1007\/978-1-0716-1920-9_18","article-title":"Expression profiles of estrogen-regulated microRNAs in cancer cells","volume":"2418","author":"Archer","year":"2022","journal-title":"Methods Mol. Biol."},{"key":"2026022803070262300_ref3","doi-asserted-by":"crossref","first-page":"35955","DOI":"10.1038\/srep35955","article-title":"Auxin flow-mediated competition between axillary buds to restore apical dominance","volume":"6","author":"Balla","year":"2016","journal-title":"Sci. Rep."},{"key":"2026022803070262300_ref4","doi-asserted-by":"crossref","first-page":"220","DOI":"10.1016\/j.tplants.2018.12.001","article-title":"An update on the signals controlling shoot branching","volume":"24","author":"Barbier","year":"2019","journal-title":"Trends Plant Sci."},{"key":"2026022803070262300_ref5","doi-asserted-by":"crossref","first-page":"167830","DOI":"10.1016\/j.jmb.2022.167830","article-title":"Disorder in the human Skp1 structure is the key to its adaptability to bind many different proteins in the SCF complex assembly","volume":"434","author":"Bhattacharya","year":"2022","journal-title":"J. Mol. Biol."},{"key":"2026022803070262300_ref6","doi-asserted-by":"crossref","DOI":"10.3390\/molecules28186740","article-title":"Ubiquitin-dependent and independent proteasomal degradation in host-pathogen interactions","volume":"28","author":"Bialek","year":"2023","journal-title":"Molecules"},{"key":"2026022803070262300_ref7","doi-asserted-by":"crossref","first-page":"52","DOI":"10.1186\/s13072-019-0294-5","article-title":"The DNA repair protein SHPRH is a nucleosome-stimulated ATPase and a nucleosome-E3 ubiquitin ligase","volume":"12","author":"Br\u00fchl","year":"2019","journal-title":"Epigenetics Chromatin"},{"key":"2026022803070262300_ref8","doi-asserted-by":"crossref","first-page":"402","DOI":"10.1111\/nph.18159","article-title":"Auxin response factors are keys to the many auxin doors","volume":"235","author":"Canc\u00e9","year":"2022","journal-title":"New Phytol."},{"key":"2026022803070262300_ref9","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2020.605069","article-title":"A rapid method for quantifying RNA and phytohormones from a small amount of plant tissue","volume":"11","author":"Cao","year":"2020","journal-title":"Front. Plant Sci."},{"key":"2026022803070262300_ref10","doi-asserted-by":"crossref","first-page":"3887","DOI":"10.1093\/jxb\/erad132","article-title":"A matter of time: auxin signaling dynamics and the regulation of auxin responses during plant development","volume":"74","author":"Caumon","year":"2023","journal-title":"J. Exp. Bot."},{"key":"2026022803070262300_ref11","doi-asserted-by":"crossref","first-page":"1218","DOI":"10.1038\/ng.3634","article-title":"Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea","volume":"48","author":"Cheng","year":"2016","journal-title":"Nat. Genet."},{"key":"2026022803070262300_ref12","doi-asserted-by":"crossref","first-page":"399","DOI":"10.1146\/annurev.biochem.78.101807.093809","article-title":"RING domain E3 ubiquitin ligases","volume":"78","author":"Deshaies","year":"2009","journal-title":"Annu. Rev. Biochem."},{"key":"2026022803070262300_ref13","doi-asserted-by":"crossref","DOI":"10.1101\/cshperspect.a039891","article-title":"No time for transcription-rapid auxin responses in plants","volume":"13","author":"Dubey","year":"2021","journal-title":"Cold Spring Harb. Perspect. Biol."},{"key":"2026022803070262300_ref14","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1111\/tpj.15151","article-title":"Plant hormone functions and interactions in biological systems","volume":"105","author":"Eiji","year":"2021","journal-title":"Plant J."},{"key":"2026022803070262300_ref15","doi-asserted-by":"crossref","first-page":"574","DOI":"10.1016\/j.tig.2018.04.006","article-title":"Rad5, HLTF, and SHPRH: a fresh view of an old story","volume":"34","author":"Elserafy","year":"2018","journal-title":"Trends Genet."},{"key":"2026022803070262300_ref16","doi-asserted-by":"crossref","first-page":"865","DOI":"10.1016\/j.tibs.2022.06.004","article-title":"Intrinsic and extrinsic regulators of Aux\/IAA protein degradation dynamics","volume":"47","author":"Figueiredo","year":"2022","journal-title":"Trends Biochem. Sci."},{"key":"2026022803070262300_ref17","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1093\/molbev\/mss220","article-title":"Evolution of the ARF gene family in land plants: old domains, new tricks","volume":"30","author":"Finet","year":"2013","journal-title":"Mol. Biol. Evol."},{"key":"2026022803070262300_ref18","doi-asserted-by":"crossref","first-page":"2887","DOI":"10.1093\/nar\/gkl295","article-title":"Identification of multiple distinct Snf2 subfamilies with conserved structural motifs","volume":"34","author":"Flaus","year":"2006","journal-title":"Nucleic Acids Res."},{"key":"2026022803070262300_ref19","doi-asserted-by":"crossref","first-page":"12111","DOI":"10.1021\/acs.jafc.1c02018","article-title":"Caged phytohormones: from chemical inactivation to controlled physiological response","volume":"69","author":"Hemelikova","year":"2021","journal-title":"J. Agric. Food Chem."},{"key":"2026022803070262300_ref20","doi-asserted-by":"crossref","first-page":"21285","DOI":"10.1073\/pnas.1910916116","article-title":"Noncanonical auxin signaling regulates cell division pattern during lateral root development","volume":"116","author":"Huang","year":"2019","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"2026022803070262300_ref21","doi-asserted-by":"crossref","first-page":"1265","DOI":"10.1080\/09168451.2018.1462693","article-title":"Chemical regulators of plant hormones and their applications in basic research and agriculture","volume":"82","author":"Jiang","year":"2018","journal-title":"Biosci. Biotechnol. Biochem."},{"key":"2026022803070262300_ref22","doi-asserted-by":"crossref","first-page":"4015","DOI":"10.1038\/s41467-022-31628-2","article-title":"Regulation of auxin respone factor condensation and nucleo-cytoplasmic partitioning","volume":"13","author":"Jing","year":"2022","journal-title":"Nat. Commun."},{"key":"2026022803070262300_ref23","doi-asserted-by":"crossref","first-page":"15162","DOI":"10.1038\/s41598-018-33506-8","article-title":"Transcriptome analysis of the genes regulating phytohormone and cellular patterning in Lagerstroemia plant architecture","volume":"8","author":"Ju","year":"2018","journal-title":"Sci. Rep."},{"key":"2026022803070262300_ref24","first-page":"1388","article-title":"Evolutionary divergence of the auxin response factor gene family in plants: functional diversification through canonical domain shuffling","volume":"6","author":"Kato","year":"2020","journal-title":"Nat Plants"},{"key":"2026022803070262300_ref25","doi-asserted-by":"crossref","first-page":"506","DOI":"10.1007\/s12374-017-0083-2","article-title":"Dual CLAVATA3 peptides in Arabidopsis shoot stem cell signaling","volume":"60","author":"Kim","year":"2017","journal-title":"J Plant Biol."},{"key":"2026022803070262300_ref26","doi-asserted-by":"crossref","first-page":"557","DOI":"10.1016\/j.tplants.2008.08.004","article-title":"Snf2 proteins in plants: gene silencing and beyond","volume":"13","author":"Knizewski","year":"2008","journal-title":"Trends Plant Sci."},{"key":"2026022803070262300_ref27","doi-asserted-by":"crossref","first-page":"e50009","DOI":"10.1371\/journal.pone.0050009","article-title":"A comprehensive analysis of interaction and localization of Arabidopsis Skp1-like (ASK) and F-box (FBX) proteins","volume":"7","author":"Kuroda","year":"2012","journal-title":"PLoS One"},{"key":"2026022803070262300_ref28","doi-asserted-by":"crossref","first-page":"3226","DOI":"10.1242\/dev.131870","article-title":"Mechanisms of auxin signaling","volume":"143","author":"Lavy","year":"2016","journal-title":"Development"},{"key":"2026022803070262300_ref29","doi-asserted-by":"crossref","first-page":"3195","DOI":"10.1242\/dev.129.13.3195","article-title":"The WUSCHEL and SHOOTMERISTEMLESS genes fulfill complementary roles in Arabidopsis shoot meristem regulation","volume":"129","author":"Lenhard","year":"2002","journal-title":"Development"},{"key":"2026022803070262300_ref30","doi-asserted-by":"crossref","first-page":"465","DOI":"10.1104\/pp.17.00765","article-title":"Auxin signaling","volume":"176","author":"Leyser","year":"2018","journal-title":"Plant Physiol."},{"key":"2026022803070262300_ref31","article-title":"Roles of brassinosteroids in plant reproduction","volume":"21","author":"Li","year":"2020","journal-title":"Int. J. Mol. Sci."},{"key":"2026022803070262300_ref32","doi-asserted-by":"crossref","first-page":"144","DOI":"10.1111\/jipb.12603","article-title":"Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development","volume":"60","author":"Li","year":"2018","journal-title":"J. Integr. Plant Biol."},{"key":"2026022803070262300_ref33","doi-asserted-by":"crossref","first-page":"440","DOI":"10.1038\/nature22036","article-title":"Mechanism of chromatin remodelling revealed by the Snf2-nucleosome structure","volume":"544","author":"Liu","year":"2017","journal-title":"Nature"},{"key":"2026022803070262300_ref34","doi-asserted-by":"crossref","first-page":"3155","DOI":"10.1111\/pce.14125","article-title":"Tomato chlorosis virus-encoded p22 suppresses auxin signalling to promote infection via interference with SKP1-Cullin-F-boxTIR1 complex assembly","volume":"44","author":"Liu","year":"2021","journal-title":"Plant Cell Environ."},{"key":"2026022803070262300_ref35","doi-asserted-by":"crossref","first-page":"947","DOI":"10.1093\/plphys\/kiab259","article-title":"DWARF53 interacts with transcription factors UB2\/UB3\/TSH4 to regulate maize tillering and tassel branching","volume":"187","author":"Liu","year":"2021","journal-title":"Plant Physiol."},{"key":"2026022803070262300_ref36","doi-asserted-by":"crossref","DOI":"10.3389\/fcell.2022.843121","article-title":"Rad5 and its human homologs, HLTF and SHPRH, are novel interactors of mismatch repair","volume":"10","author":"Miller","year":"2022","journal-title":"Front. Cell Dev. Biol."},{"key":"2026022803070262300_ref37","doi-asserted-by":"crossref","first-page":"765","DOI":"10.1007\/s00438-012-0718-4","article-title":"Auxin response factor gene family in Brassica rapa: genomic organization, divergence, expression, and evolution","volume":"287","author":"Mun","year":"2012","journal-title":"Mol. Gen. Genomics."},{"key":"2026022803070262300_ref38","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2018.01232","article-title":"Regulation of plant growth and development: a review from a chromatin remodeling perspective","volume":"9","author":"Ojolo","year":"2018","journal-title":"Front. Plant Sci."},{"key":"2026022803070262300_ref39","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2022.1019884","article-title":"Genome-wide identification of the knotted homeobox gene family and their involvement in stalk development in flowering Chinese cabbage","volume":"13","author":"Ou","year":"2022","journal-title":"Front. Plant Sci."},{"key":"2026022803070262300_ref40","doi-asserted-by":"crossref","first-page":"1463","DOI":"10.1104\/pp.16.01471","article-title":"Gibberellin signaling requires chromatin remodeler PICKLE to promote vegetative growth and phase transitions","volume":"173","author":"Park","year":"2017","journal-title":"Plant Physiol."},{"key":"2026022803070262300_ref41","doi-asserted-by":"crossref","first-page":"4301","DOI":"10.1038\/s41598-023-31417-x","article-title":"Overexpression of Physcomitrium patens cell cycle regulators leads to larger gametophytes","volume":"13","author":"Peramuna","year":"2023","journal-title":"Sci. Rep."},{"key":"2026022803070262300_ref42","doi-asserted-by":"crossref","first-page":"448","DOI":"10.1016\/j.pbi.2006.07.006","article-title":"Auxin signaling","volume":"9","author":"Quint","year":"2006","journal-title":"Curr. Opin. Plant Biol."},{"key":"2026022803070262300_ref43","doi-asserted-by":"crossref","first-page":"800","DOI":"10.1002\/bmb.21552","article-title":"Real-time quantitative PCR: a tool for absolute and relative quantification","volume":"49","author":"Ravikumar","year":"2021","journal-title":"Biochem. Mol. Biol. Educ."},{"key":"2026022803070262300_ref44","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1016\/j.dnarep.2019.03.007","article-title":"SWI\/SNF: complex complexes in genome stability and cancer","volume":"77","author":"Ribeiro-Silva","year":"2019","journal-title":"DNA Repair (Amst)"},{"key":"2026022803070262300_ref45","doi-asserted-by":"crossref","first-page":"557","DOI":"10.1214\/23-STS901","article-title":"Online multiple hypothesis testing","volume":"38","author":"Robertson","year":"2023","journal-title":"Stat. Sci."},{"key":"2026022803070262300_ref46","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2019.01296","article-title":"Light regulation of axillary bud outgrowth along plant axes: an overview of the roles of sugars and hormones","volume":"10","author":"Schneider","year":"2019","journal-title":"Front. Plant Sci."},{"key":"2026022803070262300_ref47","doi-asserted-by":"crossref","DOI":"10.3390\/biom10030463","article-title":"The human RAD5 homologs, HLTF and SHPRH, have separate functions in DNA damage tolerance dependent on the DNA lesion type","volume":"10","author":"Seelinger","year":"2020","journal-title":"Biomolecules"},{"key":"2026022803070262300_ref48","doi-asserted-by":"crossref","first-page":"499","DOI":"10.1111\/jipb.13208","article-title":"Chromatin-remodeling complexes: conserved and plant-specific subunits in Arabidopsis","volume":"64","author":"Shang","year":"2022","journal-title":"J. Integr. Plant Biol."},{"key":"2026022803070262300_ref49","doi-asserted-by":"crossref","first-page":"17105","DOI":"10.1073\/pnas.1907968116","article-title":"CsBRC1 inhibits axillary bud outgrowth by directly repressing the auxin efflux carrier CsPIN3 in cucumber","volume":"116","author":"Shen","year":"2019","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"2026022803070262300_ref50","doi-asserted-by":"crossref","first-page":"2732","DOI":"10.1021\/acs.analchem.2c03719","article-title":"Costs and benefits of popular P-value correction methods in three models of quantitative omic experiments","volume":"95","author":"Shuken","year":"2023","journal-title":"Anal. Chem."},{"key":"2026022803070262300_ref51","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1093\/pcp\/pch009","article-title":"Expression and interaction analysis of Arabidopsis Skp1-related genes","volume":"45","author":"Takahashi","year":"2004","journal-title":"Plant Cell Physiol"},{"key":"2026022803070262300_ref52","doi-asserted-by":"crossref","first-page":"1534","DOI":"10.1111\/nph.15039","article-title":"Mutational studies of the Aux\/IAA proteins in Physcomitrella reveal novel insights into their function","volume":"218","author":"Tao","year":"2018","journal-title":"New Phytol."},{"key":"2026022803070262300_ref53","doi-asserted-by":"crossref","first-page":"1343","DOI":"10.1016\/j.molcel.2022.02.020","article-title":"Active DNA damage eviction by HLTF stimulates nucleotide excision repair","volume":"82","author":"Toorn","year":"2022","journal-title":"Mol. Cell"},{"key":"2026022803070262300_ref54","first-page":"538","article-title":"Auxin-induced expression divergence between Arabidopsis species may originate within the TIR1\/AFB-AUX\/IAA-ARF module","volume":"68","author":"Trenner","year":"2017","journal-title":"J. Exp. Bot."},{"key":"2026022803070262300_ref55","doi-asserted-by":"crossref","first-page":"51","DOI":"10.1016\/j.pbi.2014.06.006","article-title":"Diversity and specificity: auxin perception and signaling through the TIR1\/AFB pathway","volume":"21","author":"Wang","year":"2014","journal-title":"Curr. Opin. Plant Biol."},{"key":"2026022803070262300_ref56","doi-asserted-by":"crossref","first-page":"e1011503","DOI":"10.1371\/journal.pcbi.1011503","article-title":"Modelling how plant cell-cycle progression leads to cell size regulation","volume":"19","author":"Williamson","year":"2023","journal-title":"PLoS Comput. Biol."},{"key":"2026022803070262300_ref57","doi-asserted-by":"crossref","first-page":"e09269","DOI":"10.7554\/eLife.09269","article-title":"Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate","volume":"4","author":"Wu","year":"2015","journal-title":"eLife"},{"key":"2026022803070262300_ref58","doi-asserted-by":"crossref","first-page":"1635","DOI":"10.1111\/tpj.15026","article-title":"OsWUS promotes tiller bud growth by establishing weak apical dominance in rice","volume":"104","author":"Xia","year":"2020","journal-title":"Plant J."},{"key":"2026022803070262300_ref59","doi-asserted-by":"crossref","first-page":"4974","DOI":"10.1016\/j.csbj.2023.10.005","article-title":"PlantCHRs: a comprehensive database of plant chromatin remodeling factors","volume":"21","author":"Yan","year":"2023","journal-title":"Comput. Struct. Biotechnol. J."},{"key":"2026022803070262300_ref60","doi-asserted-by":"crossref","DOI":"10.3389\/fpls.2019.00900","article-title":"A role for PICKLE in the regulation of cold and salt stress tolerance in Arabidopsis","volume":"10","author":"Yang","year":"2019","journal-title":"Front. Plant Sci."},{"key":"2026022803070262300_ref61","doi-asserted-by":"crossref","first-page":"1350","DOI":"10.1126\/science.abe2305","article-title":"Molecular mechanism of cytokinin-activated cell division in Arabidopsis","volume":"371","author":"Yang","year":"2021","journal-title":"Science"},{"key":"2026022803070262300_ref62","doi-asserted-by":"crossref","first-page":"2638","DOI":"10.1093\/plcell\/koac117","article-title":"Chromatin remodeling complexes regulate genome architecture in Arabidopsis","volume":"34","author":"Yang","year":"2022","journal-title":"Plant Cell"},{"key":"2026022803070262300_ref63","doi-asserted-by":"crossref","first-page":"703","DOI":"10.1038\/416703a","article-title":"Structure of the Cul1\u2013Rbx1\u2013Skp1\u2013F boxSkp2 SCF ubiquitin ligase complex","volume":"416","author":"Zheng","year":"2002","journal-title":"Nature"},{"key":"2026022803070262300_ref64","doi-asserted-by":"crossref","first-page":"e13482","DOI":"10.1111\/cpr.13482","article-title":"3D genome perspective on cell fate determination, organ regeneration, and diseases","volume":"56","author":"Zhong","year":"2023","journal-title":"Cell Prolif."},{"key":"2026022803070262300_ref65","doi-asserted-by":"crossref","first-page":"406","DOI":"10.1038\/nature12878","article-title":"D14\u2013SCFD3-dependent degradation of D53 regulates strigolactone signalling","volume":"504","author":"Zhou","year":"2013","journal-title":"Nature"},{"key":"2026022803070262300_ref66","doi-asserted-by":"crossref","first-page":"1384","DOI":"10.3390\/plants12061384","article-title":"The chromatin remodeling factor BrCHR39 targets DNA methylation to positively regulate apical dominance in Brassica rapa","volume":"12","author":"Zhu","year":"2023","journal-title":"Plants"}],"container-title":["Plant and Cell Physiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/pcp\/advance-article-pdf\/doi\/10.1093\/pcp\/pcaf075\/63727621\/pcaf075.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/pcp\/article-pdf\/66\/8\/1240\/63727621\/pcaf075.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/pcp\/article-pdf\/66\/8\/1240\/63727621\/pcaf075.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,2,28]],"date-time":"2026-02-28T08:07:14Z","timestamp":1772266034000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/pcp\/article\/66\/8\/1240\/8196568"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,7,11]]},"references-count":66,"journal-issue":{"issue":"8","published-online":{"date-parts":[[2025,7,11]]},"published-print":{"date-parts":[[2025,9,13]]}},"URL":"https:\/\/doi.org\/10.1093\/pcp\/pcaf075","relation":{},"ISSN":["0032-0781","1471-9053"],"issn-type":[{"value":"0032-0781","type":"print"},{"value":"1471-9053","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2025,8]]},"published":{"date-parts":[[2025,7,11]]}}}