{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,15]],"date-time":"2026-10-15T09:48:59Z","timestamp":1792057739264,"version":"4.4.0"},"reference-count":127,"publisher":"Oxford University Press (OUP)","issue":"3","license":[{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/pages\/standard-publication-reuse-rights"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["32270613"],"award-info":[{"award-number":["32270613"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31922009"],"award-info":[{"award-number":["31922009"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004735","name":"Natural Science Foundation of Hunan Province","doi-asserted-by":"publisher","award":["2024JJ3007"],"award-info":[{"award-number":["2024JJ3007"]}],"id":[{"id":"10.13039\/501100004735","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Yunnan Fundamental Research Projects","award":["202201AS070051"],"award-info":[{"award-number":["202201AS070051"]}]},{"name":"Yunnan Fundamental Research Projects","award":["202305AS350010"],"award-info":[{"award-number":["202305AS350010"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025,3,5]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>Abscisic acid (ABA) suppresses Arabidopsis (Arabidopsis thaliana) seed germination and post-germinative growth. Nitrate stimulates seed germination, but whether it directly regulates ABA signaling and the associated underlying molecular mechanisms remain unknown. Here, we showed that nitrate alleviates the repressive effects of ABA on seed germination independently of the nitric oxide (NO) pathway. Moreover, nitrate attenuates ABA signaling activated by ABSCISIC ACID INSENSITIVE3 (ABI3) and ABI5, two critical transcriptional regulators of the ABA pathway. Mechanistic analyses demonstrated that ABI3 and ABI5 physically interact with the nitrate signaling-related core transcription factor NIN-LIKE PROTEIN 8 (NLP8). After ABA treatment, NLP8 suppresses ABA responses during seed germination without affecting ABA content. Notably, nitrate represses ABA signaling mainly through NLP8. Genetic analyses showed that NLP8 acts upstream of ABI3 and ABI5. Specifically, NLP8 inhibits the transcriptional functions of ABI3 and ABI5, as well as their ABA-induced accumulation. Additionally, NLP8 overexpression largely suppresses the ABA hypersensitivity of mutant plants exhibiting impaired NO biosynthesis or signaling. Collectively, our study reveals that nitrate counteracts the inhibitory effects of ABA signaling on seed germination and provides mechanistic insights into the NLP8\u2013ABI3\/ABI5 interactions and their antagonistic relationships in ABA signaling.<\/jats:p>","DOI":"10.1093\/plcell\/koaf046","type":"journal-article","created":{"date-parts":[[2025,3,26]],"date-time":"2025-03-26T09:54:55Z","timestamp":1742982895000},"source":"Crossref","is-referenced-by-count":21,"title":["Nitrate attenuates abscisic acid signaling via NIN-LIKE PROTEIN8 in Arabidopsis seed germination"],"prefix":"10.1093","volume":"37","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-4271-0276","authenticated-orcid":false,"given":"Zhichong","family":"Huang","sequence":"first","affiliation":[{"name":"School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China , Hefei, Anhui 230027 ,","place":["China"]},{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0173-9889","authenticated-orcid":false,"given":"Xiao","family":"Han","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9639-9612","authenticated-orcid":false,"given":"Kunrong","family":"He","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]},{"name":"State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University , Nanjing 210037 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jingwen","family":"Ye","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China , Hefei, Anhui 230027 ,","place":["China"]},{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chunlan","family":"Yu","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China , Hefei, Anhui 230027 ,","place":["China"]},{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4965-4307","authenticated-orcid":false,"given":"Tingting","family":"Xu","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8400-5663","authenticated-orcid":false,"given":"Juping","family":"Zhang","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7362-2423","authenticated-orcid":false,"given":"Jiancan","family":"Du","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3401-0413","authenticated-orcid":false,"given":"Qiantang","family":"Fu","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1570-8752","authenticated-orcid":false,"given":"Yanru","family":"Hu","sequence":"additional","affiliation":[{"name":"CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences , Kunming, Yunnan 650223 ,","place":["China"]},{"name":"State Key Laboratory of Chemo and Biosensing and Hunan Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Hunan University , Changsha 410082 ,","place":["China"]},{"name":"Yuelushan Laboratory , Changsha 410128 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2025,3,24]]},"reference":[{"issue":"1","key":"2025032901303960900_koaf046-B1","doi-asserted-by":"publisher","first-page":"8669","DOI":"10.1038\/ncomms9669","article-title":"S-nitrosylation triggers ABI5 degradation to promote seed germination and seedling growth","volume":"6","author":"Albertos","year":"2015","journal-title":"Nat Commun."},{"issue":"4","key":"2025032901303960900_koaf046-B2","doi-asserted-by":"publisher","first-page":"500","DOI":"10.1111\/j.1365-3040.2005.01292.x","article-title":"Nitrate, a signal relieving seed dormancy in Arabidopsis","volume":"28","author":"Alboresi","year":"2005","journal-title":"Plant Cell Environ"},{"issue":"3","key":"2025032901303960900_koaf046-B3","doi-asserted-by":"publisher","first-page":"479","DOI":"10.1007\/s00425-004-1251-4","article-title":"Changes in endogenous abscisic acid levels during dormancy release and maintenance of mature seeds: studies with the Cape Verde Islands ecotype, the dormant model of Arabidopsis thaliana","volume":"219","author":"Ali-Rachedi","year":"2004","journal-title":"Planta"},{"issue":"3","key":"2025032901303960900_koaf046-B4","doi-asserted-by":"publisher","first-page":"517","DOI":"10.1093\/jxb\/erj060","article-title":"Nitric oxide reduces seed dormancy in Arabidopsis","volume":"57","author":"Bethke","year":"2006","journal-title":"J Exp Bot."},{"issue":"1","key":"2025032901303960900_koaf046-B5","doi-asserted-by":"publisher","first-page":"113","DOI":"10.1111\/j.1365-313X.2005.02615.x","article-title":"ABA-induced NO generation and stomatal closure in Arabidopsis are dependent on H2O2 synthesis","volume":"45","author":"Bright","year":"2006","journal-title":"Plant J"},{"issue":"4","key":"2025032901303960900_koaf046-B6","doi-asserted-by":"publisher","first-page":"1533","DOI":"10.1104\/pp.005793","article-title":"Regulation and role of the Arabidopsis abscisic acid-insensitive 5 gene in abscisic acid, sugar, and stress response","volume":"129","author":"Brocard","year":"2002","journal-title":"Plant Physiol"},{"key":"2025032901303960900_koaf046-B7","doi-asserted-by":"publisher","first-page":"22","DOI":"10.3389\/fpls.2014.00022","article-title":"Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments","volume":"5","author":"Canales","year":"2014","journal-title":"Front Plant Sci."},{"issue":"4","key":"2025032901303960900_koaf046-B8","doi-asserted-by":"publisher","first-page":"871","DOI":"10.1093\/jxb\/erw458","article-title":"The AFL subfamily of B3 transcription factors: evolution and function in angiosperm seeds","volume":"68","author":"Carbonero","year":"2017","journal-title":"J Exp Bot."},{"issue":"3","key":"2025032901303960900_koaf046-B9","doi-asserted-by":"publisher","first-page":"373","DOI":"10.1046\/j.1365-313X.2002.01295.x","article-title":"Regulation of Arabidopsis thaliana Em genes: role of ABI5","volume":"30","author":"Carles","year":"2002","journal-title":"Plant J"},{"issue":"7","key":"2025032901303960900_koaf046-B10","doi-asserted-by":"publisher","first-page":"2898","DOI":"10.1105\/tpc.112.098277","article-title":"The Arabidopsis mediator subunit MED25 differentially regulates jasmonate and abscisic acid signaling through interacting with the MYC2 and ABI5 transcription factors","volume":"24","author":"Chen","year":"2012","journal-title":"Plant Cell"},{"issue":"1","key":"2025032901303960900_koaf046-B11","doi-asserted-by":"publisher","first-page":"9","DOI":"10.1186\/1754-6834-3-9","article-title":"A high-throughput transient gene expression system for switchgrass (Panicum virgatum L.) seedlings","volume":"3","author":"Chen","year":"2010","journal-title":"Biotechnol Biofuels."},{"issue":"9","key":"2025032901303960900_koaf046-B12","doi-asserted-by":"publisher","first-page":"3004","DOI":"10.1093\/plcell\/koab165","article-title":"HBI transcription factor-mediated ROS homeostasis regulates nitrate signal transduction","volume":"33","author":"Chu","year":"2021","journal-title":"Plant Cell"},{"issue":"7","key":"2025032901303960900_koaf046-B13","doi-asserted-by":"publisher","first-page":"1091","DOI":"10.1093\/aob\/mcaa040","article-title":"Arabidopsis chloroplast J protein DJC75\/CRRJ mediates nitrate-promoted seed germination in the dark","volume":"125","author":"Ciou","year":"2020","journal-title":"Ann Bot."},{"issue":"7","key":"2025032901303960900_koaf046-B14","doi-asserted-by":"publisher","first-page":"859","DOI":"10.1105\/tpc.7.7.859","article-title":"Nitrate: nutrient and signal for plant growth","volume":"7","author":"Crawford","year":"1995","journal-title":"Plant Cell"},{"key":"2025032901303960900_koaf046-B15","doi-asserted-by":"publisher","first-page":"e0011","DOI":"10.1199\/tab.0011","article-title":"Molecular and developmental biology of inorganic nitrogen nutrition","volume":"1","author":"Crawford","year":"2002","journal-title":"Arabidopsis Book"},{"key":"2025032901303960900_koaf046-B16","doi-asserted-by":"publisher","first-page":"651","DOI":"10.1146\/annurev-arplant-042809-112122","article-title":"Abscisic acid: emergence of a core signaling network","volume":"61","author":"Cutler","year":"2010","journal-title":"Annu Rev Plant Biol."},{"issue":"1","key":"2025032901303960900_koaf046-B17","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1104\/pp.105.063743","article-title":"Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis","volume":"139","author":"Czechowski","year":"2005","journal-title":"Plant Physiol"},{"issue":"2","key":"2025032901303960900_koaf046-B18","doi-asserted-by":"publisher","first-page":"517","DOI":"10.1105\/tpc.112.105767","article-title":"The PP6 phosphatase regulates ABI5 phosphorylation and abscisic acid signaling in Arabidopsis","volume":"25","author":"Dai","year":"2013","journal-title":"Plant Cell"},{"issue":"9","key":"2025032901303960900_koaf046-B19","doi-asserted-by":"publisher","first-page":"3277","DOI":"10.1093\/plcell\/koae194","article-title":"The U-box E3 ubiquitin ligase PUB35 negatively regulates ABA signaling through AFP1-mediated degradation of ABI5","volume":"36","author":"Du","year":"2024","journal-title":"Plant Cell"},{"issue":"3","key":"2025032901303960900_koaf046-B20","doi-asserted-by":"publisher","first-page":"150","DOI":"10.1017\/S096025851800020X","article-title":"Regulation of seed dormancy and germination by nitrate","volume":"28","author":"Duermeyer","year":"2018","journal-title":"Seed Sci Res."},{"issue":"1","key":"2025032901303960900_koaf046-B21","doi-asserted-by":"publisher","first-page":"60","DOI":"10.1111\/j.1365-313X.2007.03118.x","article-title":"Seed dormancy release in Arabidopsis Cvi by dry after-ripening, low temperature, nitrate and light shows common quantitative patterns of gene expression directed by environmentally specific sensing","volume":"51","author":"Finch-Savage","year":"2007","journal-title":"Plant J"},{"issue":"2","key":"2025032901303960900_koaf046-B22","doi-asserted-by":"publisher","first-page":"253","DOI":"10.1007\/s11103-005-8767-2","article-title":"Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3","volume":"59","author":"Finkelstein","year":"2005","journal-title":"Plant Mol Biol."},{"issue":"1","key":"2025032901303960900_koaf046-B23","doi-asserted-by":"publisher","first-page":"387","DOI":"10.1146\/annurev.arplant.59.032607.092740","article-title":"Molecular aspects of seed dormancy","volume":"59","author":"Finkelstein","year":"2008","journal-title":"Annu Rev Plant Biol."},{"issue":"6","key":"2025032901303960900_koaf046-B24","doi-asserted-by":"publisher","first-page":"756","DOI":"10.1046\/j.1365-313X.1994.5060765.x","article-title":"Mutations at two new Arabidopsis ABA response loci are similar to the abi3 mutations","volume":"5","author":"Finkelstein","year":"1994","journal-title":"Plant J"},{"issue":"4","key":"2025032901303960900_koaf046-B25","doi-asserted-by":"publisher","first-page":"599","DOI":"10.1105\/tpc.12.4.599","article-title":"The Arabidopsis abscisic acid response gene ABI5 encodes a basic leucine zipper transcription factor","volume":"12","author":"Finkelstein","year":"2000","journal-title":"Plant Cell"},{"issue":"1504","key":"2025032901303960900_koaf046-B26","doi-asserted-by":"publisher","first-page":"2017","DOI":"10.1098\/rspb.2002.2120","article-title":"Root system architecture determines fitness in an Arabidopsis mutant in competition for immobile phosphate ions but not for nitrate ions","volume":"269","author":"Fitter","year":"2002","journal-title":"Proc Biol Sci."},{"issue":"20","key":"2025032901303960900_koaf046-B27","doi-asserted-by":"publisher","first-page":"8380","DOI":"10.1073\/pnas.0903144106","article-title":"Arabidopsis mutant deficient in abscisic acid-activated protein kinases reveals critical roles in growth, reproduction, and stress","volume":"106","author":"Fujii","year":"2009","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"2","key":"2025032901303960900_koaf046-B28","doi-asserted-by":"publisher","first-page":"485","DOI":"10.1105\/tpc.106.048538","article-title":"Identification of two protein kinases required for abscisic acid regulation of seed germination, root growth, and gene expression in Arabidopsis","volume":"19","author":"Fujii","year":"2007","journal-title":"Plant Cell"},{"issue":"6","key":"2025032901303960900_koaf046-B29","doi-asserted-by":"publisher","first-page":"1988","DOI":"10.1073\/pnas.0505667103","article-title":"Abscisic acid-dependent multisite phosphorylation regulates the activity of a transcription activator AREB1","volume":"103","author":"Furihata","year":"2006","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"6","key":"2025032901303960900_koaf046-B30","doi-asserted-by":"publisher","first-page":"643","DOI":"10.1007\/s11103-008-9344-2","article-title":"A small plant-specific protein family of ABI five binding proteins (AFPs) regulates stress response in germinating Arabidopsis seeds and seedlings","volume":"67","author":"Garcia","year":"2008","journal-title":"Plant Mol Biol."},{"issue":"3","key":"2025032901303960900_koaf046-B31","doi-asserted-by":"publisher","first-page":"369","DOI":"10.1016\/j.molcel.2013.12.020","article-title":"Nitric oxide sensing in plants is mediated by proteolytic control of group VII ERF transcription factors","volume":"53","author":"Gibbs","year":"2014","journal-title":"Mol Cell."},{"issue":"10","key":"2025032901303960900_koaf046-B32","doi-asserted-by":"publisher","first-page":"1251","DOI":"10.1105\/tpc.4.10.1251","article-title":"Isolation of the Arabidopsis ABI3 gene by positional cloning","volume":"4","author":"Giraudat","year":"1992","journal-title":"Plant Cell"},{"issue":"7","key":"2025032901303960900_koaf046-B33","doi-asserted-by":"publisher","first-page":"1007","DOI":"10.1007\/s00299-013-1409-2","article-title":"Gibberellins and abscisic acid signal crosstalk: living and developing under unfavorable conditions","volume":"32","author":"Golldack","year":"2013","journal-title":"Plant Cell Rep"},{"issue":"3","key":"2025032901303960900_koaf046-B34","doi-asserted-by":"publisher","first-page":"1515","DOI":"10.1104\/pp.113.234740","article-title":"Cytokinin antagonizes abscisic acid-mediated inhibition of cotyledon greening by promoting the degradation of Abscisic Acid Insensitive5 protein in Arabidopsis","volume":"164","author":"Guan","year":"2014","journal-title":"Plant Physiol"},{"issue":"2","key":"2025032901303960900_koaf046-B35","doi-asserted-by":"publisher","first-page":"183","DOI":"10.1016\/j.pbi.2005.01.011","article-title":"Dormancy release, ABA and pre-harvest sprouting","volume":"8","author":"Gubler","year":"2005","journal-title":"Curr Opin Plant Biol."},{"issue":"4","key":"2025032901303960900_koaf046-B36","doi-asserted-by":"publisher","first-page":"2812","DOI":"10.1093\/plphys\/kiac456","article-title":"Cycc1;1 negatively modulates ABA signaling by interacting with and inhibiting ABI5 during seed germination","volume":"190","author":"Guo","year":"2022","journal-title":"Plant Physiol"},{"issue":"1","key":"2025032901303960900_koaf046-B37","doi-asserted-by":"publisher","first-page":"13","DOI":"10.1186\/1746-4811-1-13","article-title":"Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants","volume":"1","author":"Hellens","year":"2005","journal-title":"Plant Methods"},{"issue":"3","key":"2025032901303960900_koaf046-B38","doi-asserted-by":"publisher","first-page":"1991\u20132005","DOI":"10.1104\/pp.15.00568","article-title":"The nitrate-inducible NAC transcription factor TaNAC2-5A controls nitrate response and increases wheat yield","volume":"169","author":"He","year":"2015","journal-title":"Plant Physiol"},{"issue":"1","key":"2025032901303960900_koaf046-B39","doi-asserted-by":"publisher","first-page":"2296","DOI":"10.1038\/s41467-023-38085-5","article-title":"UDP-glucosyltransferase OsUGT75A promotes submergence tolerance during rice seed germination","volume":"14","author":"He","year":"2023","journal-title":"Nat Commun."},{"issue":"1","key":"2025032901303960900_koaf046-B40","doi-asserted-by":"publisher","first-page":"131","DOI":"10.1093\/oxfordjournals.aob.a087715","article-title":"Nitrate reductase independent stimulation of seed germination in Sisymbrium officinale L. (hedge mustard) by light and nitrate","volume":"63","author":"Hilhorst","year":"1989","journal-title":"Ann Bot."},{"issue":"6","key":"2025032901303960900_koaf046-B41","doi-asserted-by":"publisher","first-page":"1184","DOI":"10.1016\/j.cell.2009.07.004","article-title":"CHL1 functions as a nitrate sensor in plants","volume":"138","author":"Ho","year":"2009","journal-title":"Cell"},{"issue":"7","key":"2025032901303960900_koaf046-B42","doi-asserted-by":"publisher","first-page":"1520","DOI":"10.1105\/tpc.18.00825","article-title":"The transcription factor INDUCER OF CBF EXPRESSION1 interacts with ABSCISIC ACID INSENSITIVE5 and DELLA proteins to fine-tune abscisic acid signaling during seed germination in Arabidopsis","volume":"31","author":"Hu","year":"2019","journal-title":"Plant Cell"},{"issue":"8","key":"2025032901303960900_koaf046-B43","doi-asserted-by":"publisher","first-page":"2907","DOI":"10.1105\/tpc.113.112631","article-title":"Jasmonate regulates the INDUCER OF CBF EXPRESSION-C-REPEAT BINDING FACTOR\/DRE BINDING FACTOR1 cascade and freezing tolerance in Arabidopsis","volume":"25","author":"Hu","year":"2013","journal-title":"Plant Cell"},{"issue":"11","key":"2025032901303960900_koaf046-B44","doi-asserted-by":"publisher","first-page":"4394","DOI":"10.1105\/tpc.114.130849","article-title":"BRASSINOSTEROID INSENSITIVE2 interacts with ABSCISIC ACID INSENSITIVE5 to mediate the antagonism of brassinosteroids to abscisic acid during seed germination in Arabidopsis","volume":"26","author":"Hu","year":"2014","journal-title":"Plant Cell"},{"issue":"2","key":"2025032901303960900_koaf046-B45","doi-asserted-by":"publisher","first-page":"907","DOI":"10.1111\/nph.15653","article-title":"The RCC1 family protein SAB1 negatively regulates ABI5 through multidimensional mechanisms during postgermination in Arabidopsis","volume":"222","author":"Ji","year":"2019","journal-title":"New Phytol"},{"issue":"1","key":"2025032901303960900_koaf046-B46","doi-asserted-by":"publisher","first-page":"86","DOI":"10.1016\/j.molp.2021.12.004","article-title":"Nutrient-hormone relations: driving root plasticity in plants","volume":"15","author":"Jia","year":"2022","journal-title":"Mol Plant."},{"issue":"1","key":"2025032901303960900_koaf046-B47","doi-asserted-by":"publisher","first-page":"230","DOI":"10.1105\/tpc.113.117838","article-title":"Arabidopsis WRKY57 functions as node of convergence for jasmonic acid-and auxin-mediated signaling in jasmonic acid-induced leaf senescence","volume":"26","author":"Jiang","year":"2014","journal-title":"Plant Cell"},{"issue":"1","key":"2025032901303960900_koaf046-B48","doi-asserted-by":"publisher","first-page":"246","DOI":"10.1111\/nph.15757","article-title":"JAZ proteins modulate seed germination through interaction with ABI5 in bread wheat and Arabidopsis","volume":"223","author":"Ju","year":"2019","journal-title":"New Phytol"},{"issue":"6","key":"2025032901303960900_koaf046-B49","doi-asserted-by":"publisher","first-page":"1388","DOI":"10.1105\/tpc.16.00125","article-title":"PIF1-interacting transcription factors and their binding sequence elements determine the in vivo targeting sites of PIF1","volume":"28","author":"Kim","year":"2016","journal-title":"Plant Cell"},{"issue":"9","key":"2025032901303960900_koaf046-B50","doi-asserted-by":"publisher","first-page":"2357","DOI":"10.1105\/tpc.107.055566","article-title":"Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense","volume":"20","author":"Kim","year":"2008","journal-title":"Plant Cell"},{"issue":"6","key":"2025032901303960900_koaf046-B51","doi-asserted-by":"publisher","first-page":"939","DOI":"10.1111\/j.1365-313X.2005.02583.x","article-title":"Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors","volume":"44","author":"Kobayashi","year":"2005","journal-title":"Plant J"},{"issue":"1","key":"2025032901303960900_koaf046-B52","doi-asserted-by":"publisher","first-page":"1617","DOI":"10.1038\/ncomms2621","article-title":"Arabidopsis NIN-like transcription factors have a central role in nitrate signalling","volume":"4","author":"Konishi","year":"2013","journal-title":"Nat Commun."},{"issue":"3","key":"2025032901303960900_koaf046-B53","doi-asserted-by":"publisher","first-page":"377","DOI":"10.1111\/j.1399-3054.1984.tb06343.x","article-title":"The isolation and characterization of abscisic acid-insensitive mutants of Arabidopsis thaliana","volume":"61","author":"Koornneef","year":"1984","journal-title":"Physiol Plant."},{"issue":"6","key":"2025032901303960900_koaf046-B54","doi-asserted-by":"publisher","first-page":"927","DOI":"10.1016\/j.devcel.2010.05.008","article-title":"Nitrate-regulated auxin transport by NRT1.1 defines a mechanism for nutrient sensing in plants","volume":"18","author":"Krouk","year":"2010","journal-title":"Dev Cell."},{"issue":"6","key":"2025032901303960900_koaf046-B55","doi-asserted-by":"publisher","first-page":"1382","DOI":"10.1073\/pnas.1718670115","article-title":"Nitrate modulates stem cell dynamics in Arabidopsis shoot meristems through cytokinins","volume":"115","author":"Landrein","year":"2018","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"6","key":"2025032901303960900_koaf046-B56","doi-asserted-by":"publisher","first-page":"1716","DOI":"10.1105\/tpc.109.073783","article-title":"DWA1 and DWA2, two Arabidopsis DWD protein components of CUL4-based E3 ligases, act together as negative regulators in ABA signal transduction","volume":"22","author":"Lee","year":"2010","journal-title":"Plant Cell"},{"issue":"1","key":"2025032901303960900_koaf046-B57","doi-asserted-by":"publisher","first-page":"341","DOI":"10.1146\/annurev-cellbio-010521-015047","article-title":"Dynamic nutrient signaling networks in plants","volume":"37","author":"Li","year":"2021","journal-title":"Annu Rev Cell Dev Biol."},{"issue":"4","key":"2025032901303960900_koaf046-B58","doi-asserted-by":"publisher","first-page":"2519","DOI":"10.1093\/plphys\/kiad044","article-title":"U-box E3 ubiquitin ligase PUB8 attenuates abscisic acid responses during early seedling growth","volume":"191","author":"Li","year":"2023","journal-title":"Plant Physiol"},{"issue":"14","key":"2025032901303960900_koaf046-B59","doi-asserted-by":"publisher","first-page":"4674","DOI":"10.1093\/jxb\/erac200","article-title":"ABSCISIC ACID INSENSITIVE 5 mediates light-ABA\/gibberellin crosstalk networks during seed germination","volume":"73","author":"Li","year":"2022","journal-title":"J Exp Bot."},{"issue":"12","key":"2025032901303960900_koaf046-B60","doi-asserted-by":"publisher","first-page":"4863","DOI":"10.1105\/tpc.113.118604","article-title":"ABA-insensitive3, ABA-insensitive5, and DELLAs interact to activate the expression of SOMNUS and other high-temperature-inducible genes in imbibed seeds in Arabidopsis","volume":"25","author":"Lim","year":"2013","journal-title":"Plant Cell"},{"issue":"2","key":"2025032901303960900_koaf046-B61","doi-asserted-by":"publisher","first-page":"835","DOI":"10.1111\/nph.16172","article-title":"ARABIDOPSIS NITRATE REGULATED 1 acts as a negative modulator of seed germination by activating ABI3 expression","volume":"225","author":"Lin","year":"2020","journal-title":"New Phytol"},{"issue":"8","key":"2025032901303960900_koaf046-B62","doi-asserted-by":"publisher","first-page":"2630","DOI":"10.1105\/tpc.110.076075","article-title":"Abscisic acid increases Arabidopsis ABI5 transcription factor levels by promoting KEG E3 ligase self-ubiquitination and proteasomal degradation","volume":"22","author":"Liu","year":"2010","journal-title":"Plant Cell"},{"issue":"15","key":"2025032901303960900_koaf046-B63","doi-asserted-by":"publisher","first-page":"4428","DOI":"10.1093\/jxb\/eraa047","article-title":"Primary nitrate responses mediated by calcium signaling and diverse protein phosphorylation","volume":"71","author":"Liu","year":"2020","journal-title":"J Exp Bot."},{"issue":"5","key":"2025032901303960900_koaf046-B64","doi-asserted-by":"publisher","first-page":"865","DOI":"10.1105\/tpc.11.5.865","article-title":"CHL1 is a dual-affinity nitrate transporter of Arabidopsis involved in multiple phases of nitrate uptake","volume":"11","author":"Liu","year":"1999","journal-title":"Plant Cell"},{"issue":"6613","key":"2025032901303960900_koaf046-B65","doi-asserted-by":"publisher","first-page":"1419","DOI":"10.1126\/science.add1104","article-title":"NIN-like protein 7 transcription factor is a plant nitrate sensor","volume":"377","author":"Liu","year":"2022","journal-title":"Science"},{"issue":"5","key":"2025032901303960900_koaf046-B66","doi-asserted-by":"publisher","first-page":"541","DOI":"10.1093\/pcp\/41.5.541","article-title":"A null mutation in a bZIP factor confers ABA-insensitivity in Arabidopsis thaliana","volume":"41","author":"Lopez-Molina","year":"2000","journal-title":"Plant Cell Physiol"},{"issue":"8","key":"2025032901303960900_koaf046-B67","doi-asserted-by":"publisher","first-page":"4782","DOI":"10.1073\/pnas.081594298","article-title":"A postgermination developmental arrest checkpoint is mediated by abscisic acid and requires the ABI5 transcription factor in Arabidopsis","volume":"98","author":"Lopez-Molina","year":"2001","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"3","key":"2025032901303960900_koaf046-B68","doi-asserted-by":"publisher","first-page":"317","DOI":"10.1046\/j.1365-313X.2002.01430.x","article-title":"ABI5 acts downstream of ABI3 to execute an ABA-dependent growth arrest during germination","volume":"32","author":"Lopez-Molina","year":"2002","journal-title":"Plant J"},{"issue":"4-5","key":"2025032901303960900_koaf046-B69","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1007\/s11103-016-0569-1","article-title":"ABI5-binding proteins (AFPs) alter transcription of ABA-induced genes via a variety of interactions with chromatin modifiers","volume":"93","author":"Lynch","year":"2017","journal-title":"Plant Mol Biol."},{"issue":"10","key":"2025032901303960900_koaf046-B70","doi-asserted-by":"publisher","first-page":"2779","DOI":"10.1093\/jxb\/ert123","article-title":"Arabidopsis CIPK26 interacts with KEG, components of the ABA signalling network and is degraded by the ubiquitin-proteasome system","volume":"64","author":"Lyzenga","year":"2013","journal-title":"J Exp Bot."},{"issue":"5930","key":"2025032901303960900_koaf046-B71","doi-asserted-by":"publisher","first-page":"1064","DOI":"10.1126\/science.1172408","article-title":"Regulators of PP2C phosphatase activity function as abscisic acid sensors","volume":"324","author":"Ma","year":"2009","journal-title":"Science"},{"issue":"2","key":"2025032901303960900_koaf046-B72","doi-asserted-by":"publisher","first-page":"949","DOI":"10.1104\/pp.108.126938","article-title":"The Arabidopsis abscisic acid catabolic gene CYP707A2 plays a key role in nitrate control of seed dormancy","volume":"149","author":"Matakiadis","year":"2009","journal-title":"Plant Physiol"},{"issue":"3","key":"2025032901303960900_koaf046-B73","doi-asserted-by":"publisher","first-page":"1110","DOI":"10.1093\/plcell\/koac362","article-title":"Auxin contributes to jasmonate-mediated regulation of abscisic acid signaling during seed germination in Arabidopsis","volume":"35","author":"Mei","year":"2023","journal-title":"Plant Cell"},{"issue":"13","key":"2025032901303960900_koaf046-B74","doi-asserted-by":"publisher","first-page":"5418","DOI":"10.1073\/pnas.0811088106","article-title":"Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling","volume":"106","author":"Miura","year":"2009","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"7273","key":"2025032901303960900_koaf046-B75","doi-asserted-by":"publisher","first-page":"609","DOI":"10.1038\/nature08583","article-title":"Structural basis of abscisic acid signaling","volume":"462","author":"Miyazono","year":"2009","journal-title":"Nature"},{"issue":"1","key":"2025032901303960900_koaf046-B76","doi-asserted-by":"publisher","first-page":"34","DOI":"10.1016\/j.plantsci.2006.02.010","article-title":"Decreased arginine and nitrite levels in nitrate reductase-deficient Arabidopsis thaliana plants impair nitric oxide synthesis and the hypersensitive response to Pseudomonas syringae","volume":"171","author":"Modolo","year":"2006","journal-title":"Plant Sci"},{"issue":"4","key":"2025032901303960900_koaf046-B77","doi-asserted-by":"publisher","first-page":"698","DOI":"10.1038\/nprot.2008.38","article-title":"Chromatin immunoprecipitation (ChIP) coupled to detection by quantitative real-time PCR to study transcription factor binding to DNA in Caenorhabditis elegans","volume":"3","author":"Mukhopadhyay","year":"2008","journal-title":"Nat Protoc."},{"key":"2025032901303960900_koaf046-B78","doi-asserted-by":"publisher","first-page":"pls052","DOI":"10.1093\/aobpla\/pls052","article-title":"Nitric oxide in plants: an assessment of the current state of knowledge","volume":"5","author":"Mur","year":"2013","journal-title":"AoB Plants"},{"issue":"5","key":"2025032901303960900_koaf046-B79","doi-asserted-by":"publisher","first-page":"686","DOI":"10.1093\/pcp\/pci086","article-title":"PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana","volume":"46","author":"Nakamichi","year":"2005","journal-title":"Plant Cell Physiol"},{"issue":"6","key":"2025032901303960900_koaf046-B80","doi-asserted-by":"publisher","first-page":"822","DOI":"10.1093\/pcp\/pcm056","article-title":"Arabidopsis clock-associated pseudo-response regulators PRR9, PRR7 and PRR5 coordinately and positively regulate flowering time through the canonical CONSTANS dependent photoperiodic pathway","volume":"48","author":"Nakamichi","year":"2007","journal-title":"Plant Cell Physiol"},{"issue":"3","key":"2025032901303960900_koaf046-B81","doi-asserted-by":"publisher","first-page":"447","DOI":"10.1093\/pcp\/pcp004","article-title":"Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in coldstress response","volume":"50","author":"Nakamichi","year":"2009","journal-title":"Plant Cell Physiol"},{"issue":"6","key":"2025032901303960900_koaf046-B82","doi-asserted-by":"publisher","first-page":"627","DOI":"10.1046\/j.1365-313x.2001.01069.x","article-title":"Physical interactions between ABA response loci of Arabidopsis","volume":"26","author":"Nakamura","year":"2001","journal-title":"Plant J"},{"issue":"7","key":"2025032901303960900_koaf046-B83","doi-asserted-by":"publisher","first-page":"1345","DOI":"10.1093\/pcp\/pcp083","article-title":"Three Arabidopsis SnRK2 protein kinases, SRK2D\/SnRK2.2, SRK2E\/SnRK2.6\/OST1 and SRK2I\/SnRK2.3, involved in ABA signaling are essential for the control of seed development and dormancy","volume":"50","author":"Nakashima","year":"2009","journal-title":"Plant Cell Physiol"},{"issue":"7","key":"2025032901303960900_koaf046-B84","doi-asserted-by":"publisher","first-page":"959","DOI":"10.1007\/s00299-013-1418-1","article-title":"ABA signaling in stress-response and seed development","volume":"32","author":"Nakashima","year":"2013","journal-title":"Plant Cell Rep"},{"issue":"3","key":"2025032901303960900_koaf046-B85","doi-asserted-by":"publisher","first-page":"1247","DOI":"10.1093\/genetics\/161.3.1247","article-title":"A screen for genes that function in abscisic acid signaling in Arabidopsis thaliana","volume":"161","author":"Nambara","year":"2002","journal-title":"Genetics"},{"issue":"5958","key":"2025032901303960900_koaf046-B86","doi-asserted-by":"publisher","first-page":"1373","DOI":"10.1126\/science.1181829","article-title":"Structural mechanism of abscisic acid binding and signaling by dimeric PYR1","volume":"326","author":"Nishimura","year":"2009","journal-title":"Science"},{"issue":"3","key":"2025032901303960900_koaf046-B87","doi-asserted-by":"publisher","first-page":"729","DOI":"10.1105\/tpc.15.00946","article-title":"Environmental nitrate stimulates abscisic acid accumulation in Arabidopsis root tips by releasing it from inactive stores","volume":"28","author":"Ondzighi-Assoume","year":"2016","journal-title":"Plant Cell"},{"issue":"12","key":"2025032901303960900_koaf046-B88","doi-asserted-by":"publisher","first-page":"3846","DOI":"10.1105\/tpc.19.00838","article-title":"Molecular mechanism underlying the synergetic effect of jasmonate on abscisic acid signaling during seed germination in Arabidopsis","volume":"32","author":"Pan","year":"2020","journal-title":"Plant Cell"},{"issue":"3","key":"2025032901303960900_koaf046-B89","doi-asserted-by":"publisher","first-page":"529","DOI":"10.1111\/tpj.13969","article-title":"Arabidopsis VQ18 and VQ26 proteins interact with ABI5 transcription factor to negatively modulate ABA response during seed germination","volume":"95","author":"Pan","year":"2018","journal-title":"Plant J"},{"issue":"5930","key":"2025032901303960900_koaf046-B90","doi-asserted-by":"publisher","first-page":"1068","DOI":"10.1126\/science.1173041","article-title":"Abscisic acid inhibits type 2C protein phosphatases via the PYR\/PYL family of START proteins","volume":"324","author":"Park","year":"2009","journal-title":"Science"},{"issue":"23","key":"2025032901303960900_koaf046-B91","doi-asserted-by":"publisher","first-page":"3194","DOI":"10.1101\/gad.11.23.3194","article-title":"The Arabidopsis GAI gene defines a signaling pathway that negatively regulates gibberellin responses","volume":"11","author":"Peng","year":"1997","journal-title":"Genes Dev"},{"issue":"6","key":"2025032901303960900_koaf046-B92","doi-asserted-by":"publisher","first-page":"2286","DOI":"10.1093\/plcell\/koac073","article-title":"COP1 positively regulates ABA signaling during Arabidopsis seedling growth in darkness by mediating ABA-induced ABI5 accumulation","volume":"34","author":"Peng","year":"2022","journal-title":"Plant Cell"},{"issue":"10","key":"2025032901303960900_koaf046-B93","doi-asserted-by":"publisher","first-page":"2729","DOI":"10.1105\/tpc.108.061515","article-title":"The gibberellic acid signaling repressor RGL2 inhibits Arabidopsis seed germination by stimulating abscisic acid synthesis and ABI5 activity","volume":"20","author":"Piskurewicz","year":"2008","journal-title":"Plant Cell"},{"issue":"50","key":"2025032901303960900_koaf046-B94","doi-asserted-by":"publisher","first-page":"19206","DOI":"10.1073\/pnas.0605275103","article-title":"The Arabidopsis NRT1.1 transporter participates in the signaling pathway triggering root colonization of nitrate-rich patches","volume":"103","author":"Remans","year":"2006","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"5","key":"2025032901303960900_koaf046-B95","doi-asserted-by":"publisher","first-page":"1358","DOI":"10.1093\/plcell\/koad328","article-title":"A commitment for life: decades of unraveling the molecular mechanisms behind seed dormancy and germination","volume":"36","author":"Sajeev","year":"2024","journal-title":"Plant Cell"},{"issue":"7273","key":"2025032901303960900_koaf046-B96","doi-asserted-by":"publisher","first-page":"665","DOI":"10.1038\/nature08591","article-title":"The abscisic acid receptor PYR1 in complex with abscisic acid","volume":"462","author":"Santiago","year":"2009","journal-title":"Nature"},{"issue":"2","key":"2025032901303960900_koaf046-B97","doi-asserted-by":"publisher","first-page":"695","DOI":"10.1105\/tpc.113.119974","article-title":"ABD1 is an Arabidopsis DCAF substrate receptor for CUL4-DDB1-based E3 ligases that acts as a negative regulator of abscisic acid signaling","volume":"26","author":"Seo","year":"2014","journal-title":"Plant Cell"},{"issue":"4","key":"2025032901303960900_koaf046-B98","doi-asserted-by":"publisher","first-page":"1466","DOI":"10.1104\/pp.010820","article-title":"Signal transduction in maize and Arabidopsis mesophyll protoplasts","volume":"127","author":"Sheen","year":"2001","journal-title":"Plant Physiol"},{"issue":"2","key":"2025032901303960900_koaf046-B99","doi-asserted-by":"publisher","first-page":"155","DOI":"10.1105\/tpc.10.2.155","article-title":"The Arabidopsis RGA gene encodes a transcriptional regulator repressing the gibberellin signal transduction pathway","volume":"10","author":"Silverstone","year":"1998","journal-title":"Plant Cell"},{"issue":"4","key":"2025032901303960900_koaf046-B100","doi-asserted-by":"publisher","first-page":"2490","DOI":"10.1093\/plphys\/kiae459","article-title":"REPRESSOR OF UV-B PHOTOMORPHOGENESIS proteins target ABA INSENSITIVE 5 for degradation to promote early plant development","volume":"196","author":"Singh","year":"2024","journal-title":"Plant Physiol"},{"issue":"6064","key":"2025032901303960900_koaf046-B101","doi-asserted-by":"publisher","first-page":"85","DOI":"10.1126\/science.1215106","article-title":"Molecular mimicry regulates ABA signaling by SnRK2 kinases and PP2C phosphatases","volume":"335","author":"Soon","year":"2012","journal-title":"Science"},{"issue":"12","key":"2025032901303960900_koaf046-B102","doi-asserted-by":"publisher","first-page":"3415","DOI":"10.1105\/tpc.106.046532","article-title":"KEEP ON GOING, a RING E3 ligase essential for Arabidopsis growth and development, is involved in abscisic acid signaling","volume":"18","author":"Stone","year":"2006","journal-title":"Plant Cell"},{"issue":"7490","key":"2025032901303960900_koaf046-B103","doi-asserted-by":"publisher","first-page":"73","DOI":"10.1038\/nature13074","article-title":"Crystal structure of the plant dual-affinity nitrate transporter NRT1.1","volume":"507","author":"Sun","year":"2014","journal-title":"Nature"},{"issue":"1","key":"2025032901303960900_koaf046-B104","doi-asserted-by":"publisher","first-page":"110","DOI":"10.1016\/0003-2697(80)90325-5","article-title":"Determination of nitrate and nitrite by high-pressure liquid chromatography: comparison with other methods for nitrate determination","volume":"102","author":"Thayer","year":"1980","journal-title":"Anal Biochem."},{"issue":"5","key":"2025032901303960900_koaf046-B105","doi-asserted-by":"publisher","first-page":"705","DOI":"10.1016\/0092-8674(93)90399-B","article-title":"The herbicide sensitivity gene CHL1 of Arabidopsis encodes a nitrate-inducible nitrate transporter","volume":"72","author":"Tsay","year":"1993","journal-title":"Cell"},{"issue":"2","key":"2025032901303960900_koaf046-B106","doi-asserted-by":"publisher","first-page":"1008","DOI":"10.1104\/pp.104.039578","article-title":"DELLA proteins and gibberellin-regulated seed germination and floral development in Arabidopsis","volume":"135","author":"Tyler","year":"2004","journal-title":"Plant Physiol"},{"issue":"41","key":"2025032901303960900_koaf046-B107","doi-asserted-by":"publisher","first-page":"17588","DOI":"10.1073\/pnas.0907095106","article-title":"Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis","volume":"106","author":"Umezawa","year":"2009","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"10","key":"2025032901303960900_koaf046-B108","doi-asserted-by":"publisher","first-page":"3712","DOI":"10.1093\/plcell\/koad199","article-title":"The Arabidopsis F-box protein SKP1-INTERACTINGPARTNER 31 modulates seed maturation and seed vigor by targeting JASMONATEZIM DOMAIN proteins independently of jasmonic acid-isoleucine","volume":"35","author":"Varshney","year":"2023","journal-title":"Plant Cell"},{"issue":"7","key":"2025032901303960900_koaf046-B109","doi-asserted-by":"publisher","first-page":"2094","DOI":"10.1105\/tpc.19.00748","article-title":"Nitrate in 2020: thirty years from transport to signaling networks","volume":"32","author":"Vidal","year":"2020","journal-title":"Plant Cell"},{"issue":"10","key":"2025032901303960900_koaf046-B110","doi-asserted-by":"publisher","first-page":"3170","DOI":"10.1105\/tpc.109.069179","article-title":"Protein phosphatases 2C regulate the activation of the Snf1-related kinase OST1 by abscisic acid in Arabidopsis","volume":"21","author":"Vlad","year":"2009","journal-title":"Plant Cell"},{"issue":"3","key":"2025032901303960900_koaf046-B111","doi-asserted-by":"publisher","first-page":"428","DOI":"10.1111\/j.1365-313X.2004.02219.x","article-title":"Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation","volume":"40","author":"Walter","year":"2004","journal-title":"Plant J"},{"issue":"25","key":"2025032901303960900_koaf046-B112","doi-asserted-by":"publisher","first-page":"15134","DOI":"10.1073\/pnas.95.25.15134","article-title":"The Arabidopsis CHL1 protein plays a major role in high-affinity nitrate uptake","volume":"95","author":"Wang","year":"1998","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"12","key":"2025032901303960900_koaf046-B113","doi-asserted-by":"publisher","first-page":"e82611","DOI":"10.1371\/journal.pone.0082611","article-title":"Nitric oxide in plants: the roles of ascorbate and hemoglobin","volume":"8","author":"Wang","year":"2013","journal-title":"PLoS One"},{"issue":"8","key":"2025032901303960900_koaf046-B114","doi-asserted-by":"publisher","first-page":"e718","DOI":"10.1371\/journal.pone.0000718","article-title":"An \u201celectronic fluorescent pictograph\u201d browser for exploring and analyzing large-scale biological data sets","volume":"2","author":"Winter","year":"2007","journal-title":"PLoS One"},{"issue":"6","key":"2025032901303960900_koaf046-B115","doi-asserted-by":"publisher","first-page":"2464","DOI":"10.1111\/nph.19533","article-title":"The ABI4-RGL2 module serves as a double agent to mediate the antagonistic crosstalk between ABA and GA signals","volume":"241","author":"Xian","year":"2024","journal-title":"New Phytol"},{"issue":"11","key":"2025032901303960900_koaf046-B116","doi-asserted-by":"publisher","first-page":"1119","DOI":"10.1093\/pcp\/pcg148","article-title":"Comparative genetic studies on the APRR5 and APRR7 genes belonging to the APRR1\/TOC1 quintet implicated in circadian rhythm, control of flowering time, and early photomorphogenesis","volume":"44","author":"Yamamoto","year":"2003","journal-title":"Plant Cell Physiol"},{"issue":"1","key":"2025032901303960900_koaf046-B117","doi-asserted-by":"publisher","first-page":"13179","DOI":"10.1038\/ncomms13179","article-title":"NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis","volume":"7","author":"Yan","year":"2016","journal-title":"Nat Commun."},{"issue":"9","key":"2025032901303960900_koaf046-B118","doi-asserted-by":"publisher","first-page":"3022","DOI":"10.1093\/plcell\/koab168","article-title":"The Arabidopsis circadian clock protein PRR5 interacts with and stimulates ABI5 to modulate abscisic acid signaling during seed germination","volume":"33","author":"Yang","year":"2021","journal-title":"Plant Cell"},{"issue":"9","key":"2025032901303960900_koaf046-B119","doi-asserted-by":"publisher","first-page":"1994","DOI":"10.1111\/pce.12763","article-title":"The antagonistic regulation of abscisic acid-inhibited root growth by brassinosteroids is partially mediated via direct suppression of ABSCISIC ACID INSENSITIVE 5 expression by BRASSINAZOLE RESISTANT 1","volume":"39","author":"Yang","year":"2016","journal-title":"Plant Cell Environ"},{"issue":"7","key":"2025032901303960900_koaf046-B120","doi-asserted-by":"publisher","first-page":"1565","DOI":"10.1038\/nprot.2007.199","article-title":"Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis","volume":"2","author":"Yoo","year":"2007","journal-title":"Nature Protoc"},{"issue":"9","key":"2025032901303960900_koaf046-B121","doi-asserted-by":"publisher","first-page":"569","DOI":"10.1016\/j.tplants.2015.05.004","article-title":"Precise protein post-translational modifications modulate ABI5 activity","volume":"20","author":"Yu","year":"2015","journal-title":"Trends Plant Sci"},{"issue":"16","key":"2025032901303960900_koaf046-B122","doi-asserted-by":"publisher","first-page":"8793","DOI":"10.1002\/ece3.6576","article-title":"Direct effects of nitrogen addition on seed germination of eight semi-arid grassland species","volume":"10","author":"Zhang","year":"2020","journal-title":"Ecol Evol."},{"issue":"13","key":"2025032901303960900_koaf046-B123","doi-asserted-by":"publisher","first-page":"1532","DOI":"10.1101\/gad.1318705","article-title":"The AIP2 E3 ligase acts as a novel negative regulator of ABA signaling by promoting ABI3 degradation","volume":"19","author":"Zhang","year":"2005","journal-title":"Genes Dev"},{"issue":"2","key":"2025032901303960900_koaf046-B124","doi-asserted-by":"publisher","first-page":"367","DOI":"10.1093\/plcell\/koad276","article-title":"S-nitrosylation of the transcription factor MYB30 facilitates nitric oxide-promoted seed germination in Arabidopsis","volume":"36","author":"Zhao","year":"2024","journal-title":"Plant Cell"},{"issue":"1","key":"2025032901303960900_koaf046-B125","doi-asserted-by":"publisher","first-page":"e006","DOI":"10.48130\/seedbio-0024-0005","article-title":"Advances in the molecular regulation of seed germination in plants","volume":"3","author":"Zhao","year":"2024","journal-title":"Seed Biol"},{"issue":"2","key":"2025032901303960900_koaf046-B126","doi-asserted-by":"publisher","first-page":"908","DOI":"10.1111\/nph.15437","article-title":"BES1 hinders ABSCISIC ACID INSENSITIVE5 and promotes seed germination in Arabidopsis","volume":"221","author":"Zhao","year":"2019","journal-title":"New Phytol"},{"issue":"2","key":"2025032901303960900_koaf046-B127","doi-asserted-by":"publisher","first-page":"659","DOI":"10.1104\/pp.114.255455","article-title":"SOS2-LIKE PROTEIN KINASE5, an SNF1-RELATED PROTEIN KINASE3-type protein kinase, is important for abscisic acid responses in Arabidopsis through phosphorylation of ABSISIC SCID-INSENSITIVE5","volume":"168","author":"Zhou","year":"2015","journal-title":"Plant Physiol"}],"container-title":["The Plant Cell"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/plcell\/advance-article-pdf\/doi\/10.1093\/plcell\/koaf046\/62555129\/koaf046.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/plcell\/article-pdf\/37\/3\/koaf046\/62555129\/koaf046.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/plcell\/article-pdf\/37\/3\/koaf046\/62555129\/koaf046.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,3,30]],"date-time":"2025-03-30T22:58:37Z","timestamp":1743375517000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/plcell\/article\/doi\/10.1093\/plcell\/koaf046\/8092165"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,3]]},"references-count":127,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2025,3,5]]}},"URL":"https:\/\/doi.org\/10.1093\/plcell\/koaf046","relation":{},"ISSN":["1040-4651","1532-298X"],"issn-type":[{"value":"1040-4651","type":"print"},{"value":"1532-298X","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2025,3]]},"published":{"date-parts":[[2025,3]]},"article-number":"koaf046"}}