{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,25]],"date-time":"2026-09-25T22:21:10Z","timestamp":1790374870524,"version":"4.1.0"},"reference-count":87,"publisher":"Oxford University Press (OUP)","issue":"6","license":[{"start":{"date-parts":[[2025,5,2]],"date-time":"2025-05-02T00:00:00Z","timestamp":1746144000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/pages\/standard-publication-reuse-rights"}],"funder":[{"name":"Agriculture and Food Research Initiative"},{"DOI":"10.13039\/100000199","name":"USDA","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000199","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100005825","name":"National Institute of Food and Agriculture","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100005825","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025,6,4]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>In this study, we demonstrated that a regulatory module consisting of the SEVEN IN ABSENTIA (SINA) ubiquitin ligase SINA3 and the WUSCHEL homeobox-containing (WOX) transcription factor WOX14 fine-tunes tomato (Solanum lycopersicum) growth and development. Overexpression of SINA3 in tomato (SINA3-OX) resulted in dwarfism due to shortened internodes with smaller cells. SINA3 regulates WOX14 levels through ubiquitin-independent proteasome-mediated degradation, wherein SINA3 acts as a linker between WOX14 and the proteasome subunits REGULATORY PARTICLE NON-ATPASEs 9 and 13 (RPN9 and RPN13). Moreover, WOX14 knockout plants (WOX14-KO) exhibited dwarfism comparable to that of SINA3-OX plants. Genetic analyses showed that SINA3 controls vegetative growth by regulating WOX14 accumulation. Notably, WOX14 directly binds to the promoters of GA biosynthesis genes and activates their expression, thereby enhancing GA levels. Knockout of the GA biosynthesis gene GA3ox1 (GA3ox1-KO) caused growth retardation in tomato, similar to SINA3-OX and WOX14-KO transgenic plants. Bioactive GA levels were lower in SINA3-OX and WOX14-KO plants compared to the controls, and exogenous bioactive GA application partially restored their vegetative growth. This finding suggests that the SINA3\u2013WOX14 module regulates vegetative growth in both GA-dependent and -independent manners. In addition, the SINA3\u2013WOX14 module regulates GA-mediated reproductive growth and development, including fruit growth, seed set, seed growth, and maturation.<\/jats:p>","DOI":"10.1093\/plcell\/koaf096","type":"journal-article","created":{"date-parts":[[2025,5,2]],"date-time":"2025-05-02T18:46:14Z","timestamp":1746211574000},"source":"Crossref","is-referenced-by-count":10,"title":["The ubiquitin ligase SINA3 and the transcription factor WOX14 regulate tomato growth and development"],"prefix":"10.1093","volume":"37","author":[{"ORCID":"https:\/\/orcid.org\/0009-0007-9085-1421","authenticated-orcid":false,"given":"Yulin","family":"Yuan","sequence":"first","affiliation":[{"name":"Department of Plant Sciences, University of Idaho , Moscow, ID 83844 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0008-3079-0484","authenticated-orcid":false,"given":"Li","family":"Huang","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of Idaho , Moscow, ID 83844 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0006-8270-4977","authenticated-orcid":false,"given":"Han","family":"Lu","sequence":"additional","affiliation":[{"name":"Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Observations and Research Station for Wetland Ecosystems of the Yangtze Estuary, Institute of Biodiversity Science and Institute of Eco-Chongming, School of Life Sciences, Fudan University , Shanghai 200433 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1314-3644","authenticated-orcid":false,"given":"Chao","family":"Xia","sequence":"additional","affiliation":[{"name":"Maize Research Institute, Sichuan Agricultural University , Chengdu 611130 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0001-3954-5695","authenticated-orcid":false,"given":"Chloe","family":"Ramirez","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of Idaho , Moscow, ID 83844 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2616-915X","authenticated-orcid":false,"given":"Mingjun","family":"Gao","sequence":"additional","affiliation":[{"name":"Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Observations and Research Station for Wetland Ecosystems of the Yangtze Estuary, Institute of Biodiversity Science and Institute of Eco-Chongming, School of Life Sciences, Fudan University , Shanghai 200433 ,","place":["China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9195-770X","authenticated-orcid":false,"given":"Cankui","family":"Zhang","sequence":"additional","affiliation":[{"name":"Department of Agronomy, Purdue Center for Plant Biology, Purdue University , West Lafayette, IN 47907 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6044-9465","authenticated-orcid":false,"given":"Fangming","family":"Xiao","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of Idaho , Moscow, ID 83844 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2025,5,2]]},"reference":[{"issue":"1","key":"2025061311065178600_koaf096-B1","doi-asserted-by":"publisher","first-page":"174","DOI":"10.1111\/nph.12644","article-title":"The tumor necrosis factor receptor-associated factor (TRAF)-like family protein SEVEN IN ABSENTIA 2 (SINA2) promotes drought tolerance in an ABA-dependent manner in Arabidopsis","volume":"202","author":"Bao","year":"2014","journal-title":"New Phytol"},{"issue":"2","key":"2025061311065178600_koaf096-B2","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1038\/hdy.1956.22","article-title":"Cryptic self-incompatibility in the wallflower: Cheiranthus cheiri L","volume":"10","author":"Bateman","year":"1956","journal-title":"Heredity (Edinb)"},{"key":"2025061311065178600_koaf096-B3","doi-asserted-by":"publisher","first-page":"e0174","DOI":"10.1199\/tab.0174","article-title":"The ubiquitination machinery of the ubiquitin system","volume":"12","author":"Callis","year":"2014","journal-title":"Arabidopsis Book"},{"issue":"3","key":"2025061311065178600_koaf096-B4","doi-asserted-by":"publisher","first-page":"561","DOI":"10.1016\/0092-8674(90)90452-K","article-title":"Seven in absentia, a gene required for specification of R7 cell fate in the Drosophila eye","volume":"63","author":"Carthew","year":"1990","journal-title":"Cell"},{"issue":"1","key":"2025061311065178600_koaf096-B5","doi-asserted-by":"publisher","first-page":"38","DOI":"10.1186\/s12284-019-0298-6","article-title":"Rice transcription factor OsMADS57 regulates plant height by modulating gibberellin catabolism","volume":"12","author":"Chu","year":"2019","journal-title":"Rice (N Y)"},{"issue":"4","key":"2025061311065178600_koaf096-B6","doi-asserted-by":"publisher","first-page":"1195","DOI":"10.1104\/pp.117.4.1195","article-title":"Gibberellin dose-response regulation of GA4 gene transcript levels in arabidopsis","volume":"117","author":"Cowling","year":"1998","journal-title":"Plant Physiol"},{"issue":"1","key":"2025061311065178600_koaf096-B7","doi-asserted-by":"publisher","first-page":"66","DOI":"10.1105\/tpc.111.093096","article-title":"Leaf-induced gibberellin signaling is essential for internode elongation, cambial activity, and fiber differentiation in tobacco stems","volume":"24","author":"Dayan","year":"2012","journal-title":"Plant Cell"},{"issue":"5","key":"2025061311065178600_koaf096-B8","doi-asserted-by":"publisher","first-page":"1523","DOI":"10.1093\/jxb\/erp094","article-title":"The role of auxin and gibberellin in tomato fruit set","volume":"60","author":"de Jong","year":"2009","journal-title":"J Exp Bot."},{"issue":"1","key":"2025061311065178600_koaf096-B9","doi-asserted-by":"publisher","first-page":"369","DOI":"10.1104\/pp.108.119453","article-title":"Seven in absentia proteins affect plant growth and nodulation in Medicago truncatula","volume":"148","author":"Den Herder","year":"2008","journal-title":"Plant Physiol"},{"issue":"3","key":"2025061311065178600_koaf096-B10","doi-asserted-by":"publisher","first-page":"560","DOI":"10.1111\/tpj.13513","article-title":"WOX14 promotes bioactive gibberellin synthesis and vascular cell differentiation in Arabidopsis","volume":"90","author":"Denis","year":"2017","journal-title":"Plant J"},{"issue":"3","key":"2025061311065178600_koaf096-B11","doi-asserted-by":"publisher","first-page":"857","DOI":"10.1016\/j.bbrc.2006.07.092","article-title":"Dimerization of hSiah proteins regulates their stability","volume":"348","author":"Depaux","year":"2006","journal-title":"Biochem Biophys Res Commun"},{"issue":"1","key":"2025061311065178600_koaf096-B12","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1186\/1471-2148-8-291","article-title":"Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis","volume":"8","author":"Deveaux","year":"2008","journal-title":"BMC Evol Biol"},{"issue":"6","key":"2025061311065178600_koaf096-B13","doi-asserted-by":"publisher","first-page":"467","DOI":"10.1016\/j.tplants.2016.01.021","article-title":"Streptophyte terrestrialization in light of plastid evolution","volume":"21","author":"de Vries","year":"2016","journal-title":"Trends Plant Sci"},{"key":"2025061311065178600_koaf096-B14","doi-asserted-by":"publisher","first-page":"e00309","DOI":"10.1016\/j.btre.2019.e00309","article-title":"Effect of low storage temperature on pollen viability of fifteen herbaceous peonies","volume":"21","author":"Du","year":"2019","journal-title":"Biotechnol Rep (Amst)"},{"issue":"1","key":"2025061311065178600_koaf096-B15","doi-asserted-by":"publisher","first-page":"216","DOI":"10.1016\/j.bbamcr.2013.05.008","article-title":"Ubiquitin-independent proteasomal degradation","volume":"1843","author":"Erales","year":"2014","journal-title":"Biochim Biophys Acta."},{"issue":"22","key":"2025061311065178600_koaf096-B16","doi-asserted-by":"publisher","first-page":"6945","DOI":"10.1093\/jxb\/eraa393","article-title":"A novel BSD domain-containing transcription factor controls vegetative growth, leaf senescence, and fruit quality in tomato","volume":"71","author":"Fan","year":"2020","journal-title":"J Exp Bot"},{"issue":"1","key":"2025061311065178600_koaf096-B17","doi-asserted-by":"publisher","first-page":"387","DOI":"10.1146\/annurev.arplant.59.032607.092740","article-title":"Molecular aspects of seed dormancy","volume":"59","author":"Finkelstein","year":"2008","journal-title":"Annu Rev Plant Biol"},{"key":"2025061311065178600_koaf096-B18","doi-asserted-by":"publisher","first-page":"dev201853","DOI":"10.1242\/dev.201853","article-title":"DELLA proteins positively regulate seed size in Arabidopsis","volume":"150","author":"Gomez","year":"2023","journal-title":"Dev"},{"key":"2025061311065178600_koaf096-B19","doi-asserted-by":"publisher","first-page":"e94919","DOI":"10.7554\/eLife.94919","article-title":"Structural assembly of the bacterial essential interactome","volume":"13","author":"G\u00f3mez Borrego","year":"2024","journal-title":"Elife"},{"issue":"3","key":"2025061311065178600_koaf096-B20","doi-asserted-by":"publisher","first-page":"429","DOI":"10.1242\/dev.01600","article-title":"Transcriptional program controlled by the floral homeotic gene AGAMOUS during early organogenesis","volume":"132","author":"G\u00f3mez-Mena","year":"2005","journal-title":"Development"},{"issue":"12","key":"2025061311065178600_koaf096-B21","doi-asserted-by":"publisher","first-page":"3399","DOI":"10.1105\/tpc.106.047415","article-title":"Genetic characterization and functional analysis of the GID1 gibberellin receptors in Arabidopsis","volume":"18","author":"Griffiths","year":"2006","journal-title":"Plant Cell"},{"issue":"3","key":"2025061311065178600_koaf096-B22","doi-asserted-by":"publisher","first-page":"657","DOI":"10.1242\/dev.00963","article-title":"Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana","volume":"131","author":"Haecker","year":"2004","journal-title":"Development"},{"issue":"12","key":"2025061311065178600_koaf096-B23","doi-asserted-by":"publisher","first-page":"523","DOI":"10.1016\/S1360-1385(00)01790-8","article-title":"Gibberellin metabolism: new insights revealed by the genes","volume":"5","author":"Hedden","year":"2000","journal-title":"Trends Plant Sci"},{"issue":"4","key":"2025061311065178600_koaf096-B24","doi-asserted-by":"publisher","first-page":"740","DOI":"10.1007\/s00344-015-9546-1","article-title":"A century of gibberellin research","volume":"34","author":"Hedden","year":"2015","journal-title":"J Plant Growth Regul."},{"issue":"1","key":"2025061311065178600_koaf096-B25","doi-asserted-by":"publisher","first-page":"19","DOI":"10.1111\/tpj.16969","article-title":"Using AlphaFold multimer to discover interkingdom protein\u2013protein interactions","volume":"120","author":"Homma","year":"2024","journal-title":"Plant J"},{"issue":"1","key":"2025061311065178600_koaf096-B26","doi-asserted-by":"publisher","first-page":"724","DOI":"10.1128\/MCB.19.1.724","article-title":"Siah-1 N-terminal RING domain is required for proteolysis function, and C-terminal sequences regulate oligomerization and binding to target proteins","volume":"19","author":"Hu","year":"1999","journal-title":"Mol Cell Biol"},{"issue":"11","key":"2025061311065178600_koaf096-B27","doi-asserted-by":"publisher","first-page":"uhad212","DOI":"10.1093\/hr\/uhad212","article-title":"Integrating genome-wide association and transcriptome analysis to provide molecular insights into heterophylly and eco-adaptability in woody plants","volume":"10","author":"Hu","year":"2023","journal-title":"Hortic Res."},{"issue":"20","key":"2025061311065178600_koaf096-B28","doi-asserted-by":"publisher","first-page":"5201","DOI":"10.1016\/j.cell.2021.08.029","article-title":"Parasitic modulation of host development by ubiquitin-independent protein degradation","volume":"184","author":"Huang","year":"2021","journal-title":"Cell"},{"issue":"110","key":"2025061311065178600_koaf096-B29","doi-asserted-by":"publisher","first-page":"53843","DOI":"10.3791\/53843","article-title":"High-throughput CRISPR vector construction and characterization of DNA modifications by generation of tomato hairy roots","author":"Jacobs","year":"2016","journal-title":"J Vis Exp"},{"issue":"2","key":"2025061311065178600_koaf096-B30","doi-asserted-by":"publisher","first-page":"153","DOI":"10.1016\/j.bbcan.2008.05.004","article-title":"Ubiquitin-independent degradation of proteins by the proteasome","volume":"1786","author":"Jariel-Encontre","year":"2008","journal-title":"Biochim Biophys Acta"},{"issue":"4","key":"2025061311065178600_koaf096-B31","doi-asserted-by":"publisher","first-page":"431","DOI":"10.1007\/s00299-020-02511-5","article-title":"WUSCHEL: a master regulator in plant growth signaling","volume":"39","author":"Jha","year":"2020","journal-title":"Plant Cell Rep"},{"issue":"4","key":"2025061311065178600_koaf096-B32","doi-asserted-by":"publisher","first-page":"2322","DOI":"10.1093\/plphys\/kiad623","article-title":"WUSCHEL-related homeobox transcription factor SlWOX13 regulates tomato fruit ripening","volume":"194","author":"Jiang","year":"2024","journal-title":"Plant Physiol"},{"issue":"2","key":"2025061311065178600_koaf096-B33","doi-asserted-by":"publisher","first-page":"261","DOI":"10.1016\/j.molp.2015.11.006","article-title":"The WUSCHEL related homeobox protein WOX7 regulates the sugar response of lateral root development in Arabidopsis thaliana","volume":"9","author":"Kong","year":"2016","journal-title":"Mol Plant"},{"issue":"2","key":"2025061311065178600_koaf096-B34","doi-asserted-by":"publisher","first-page":"471","DOI":"10.1104\/pp.116.2.471","article-title":"Alteration of hormone levels in transgenic tobacco plants overexpressing the rice homeobox gene OSH1","volume":"116","author":"Kusaba","year":"1998","journal-title":"Plant Physiol"},{"issue":"34","key":"2025061311065178600_koaf096-B35","doi-asserted-by":"publisher","first-page":"e2011900118","DOI":"10.1073\/pnas.2011900118","article-title":"Reciprocal antagonistic regulation of E3 ligases controls ACC synthase stability and responses to stress","volume":"118","author":"Lee","year":"2021","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"1","key":"2025061311065178600_koaf096-B36","doi-asserted-by":"publisher","first-page":"175","DOI":"10.1016\/j.molp.2015.07.001","article-title":"Direct derivatization and quantitation of ultra-trace gibberellins in sub-milligram fresh plant organs","volume":"9","author":"Li","year":"2016","journal-title":"Mol Plant."},{"issue":"2","key":"2025061311065178600_koaf096-B37","doi-asserted-by":"publisher","first-page":"628","DOI":"10.1105\/tpc.110.081901","article-title":"Mutation of rice BC12\/GDD1, which encodes a kinesin-like protein that binds to a GA biosynthesis gene promoter, leads to dwarfism with impaired cell elongation","volume":"23","author":"Li","year":"2011","journal-title":"Plant Cell"},{"issue":"4","key":"2025061311065178600_koaf096-B38","doi-asserted-by":"publisher","first-page":"674","DOI":"10.1111\/j.1365-313X.2012.05113.x","article-title":"WOX2 and STIMPY-LIKE\/WOX8 promote cotyledon boundary formation in Arabidopsis","volume":"72","author":"Lie","year":"2012","journal-title":"Plant J"},{"issue":"2","key":"2025061311065178600_koaf096-B39","doi-asserted-by":"publisher","first-page":"301","DOI":"10.1111\/j.1365-313X.2008.03505.x","article-title":"A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening","volume":"55","author":"Lin","year":"2008","journal-title":"Plant J"},{"issue":"8","key":"2025061311065178600_koaf096-B40","doi-asserted-by":"publisher","first-page":"2133","DOI":"10.1105\/tpc.15.00051","article-title":"Characteristics of plant essential genes allow for within- and between-species prediction of lethal mutant phenotypes","volume":"27","author":"Lloyd","year":"2015","journal-title":"Plant Cell"},{"issue":"6","key":"2025061311065178600_koaf096-B41","doi-asserted-by":"publisher","first-page":"793","DOI":"10.1016\/S0092-8674(01)00384-1","article-title":"A molecular link between stem cell regulation and floral patterning in Arabidopsis","volume":"105","author":"Lohmann","year":"2001","journal-title":"Cell"},{"issue":"3","key":"2025061311065178600_koaf096-B42","doi-asserted-by":"publisher","first-page":"844","DOI":"10.1104\/pp.114.253815","article-title":"A knotted1-like homeobox protein regulates abscission in tomato by modulating the auxin pathway","volume":"167","author":"Ma","year":"2015","journal-title":"Plant Physiol"},{"issue":"1","key":"2025061311065178600_koaf096-B43","doi-asserted-by":"publisher","first-page":"5093","DOI":"10.1038\/s41467-019-13074-9","article-title":"WUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis","volume":"10","author":"Ma","year":"2019","journal-title":"Nat Commun."},{"issue":"5","key":"2025061311065178600_koaf096-B44","doi-asserted-by":"publisher","first-page":"1947","DOI":"10.1073\/pnas.1215788110","article-title":"CYP714B1 and CYP714B2 encode gibberellin 13-oxidases that reduce gibberellin activity in rice","volume":"110","author":"Magome","year":"2013","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"6","key":"2025061311065178600_koaf096-B45","doi-asserted-by":"publisher","first-page":"687","DOI":"10.1006\/anbo.1997.0398","article-title":"Effects of seed number on competition and dominance among fruits in Capsicum annuum L","volume":"79","author":"Marcelis","year":"1997","journal-title":"Ann Bot."},{"issue":"1","key":"2025061311065178600_koaf096-B46","doi-asserted-by":"publisher","first-page":"3822","DOI":"10.1038\/s41467-019-11830-5","article-title":"The grain yield modulator miR156 regulates seed dormancy through the gibberellin pathway in rice","volume":"10","author":"Miao","year":"2019","journal-title":"Nat Commun."},{"issue":"1","key":"2025061311065178600_koaf096-B47","doi-asserted-by":"publisher","first-page":"138","DOI":"10.1111\/nph.13890","article-title":"The ubiquitin ligase SEVEN IN ABSENTIA (SINA) ubiquitinates a defense-related NAC transcription factor and is involved in defense signaling","volume":"211","author":"Miao","year":"2016","journal-title":"New Phytol"},{"issue":"1\u20132","key":"2025061311065178600_koaf096-B48","doi-asserted-by":"publisher","first-page":"123","DOI":"10.1007\/s11103-011-9851-4","article-title":"The invention of WUS-like stem cell-promoting functions in plants predates leptosporangiate ferns","volume":"78","author":"Nardmann","year":"2012","journal-title":"Plant Mol Biol."},{"issue":"22","key":"2025061311065178600_koaf096-B49","doi-asserted-by":"publisher","first-page":"5373","DOI":"10.1093\/jxb\/ery329","article-title":"The WUSCHEL-related homeobox1 gene of cucumber regulates reproductive organ development","volume":"69","author":"Niu","year":"2018","journal-title":"J Exp Bot."},{"issue":"1","key":"2025061311065178600_koaf096-B50","doi-asserted-by":"publisher","first-page":"808","DOI":"10.1038\/ncomms1810","article-title":"TEMPRANILLO genes link photoperiod and gibberellin pathways to control flowering in Arabidopsis","volume":"3","author":"Osnato","year":"2012","journal-title":"Nat Commun."},{"issue":"1","key":"2025061311065178600_koaf096-B51","doi-asserted-by":"publisher","first-page":"122","DOI":"10.1111\/j.1469-8137.2010.03336.x","article-title":"Comparative expression pattern analysis of WUSCHEL-related homeobox 2 (WOX2) and WOX8\/9 in developing seeds and somatic embryos of the gymnosperm Picea abies","volume":"188","author":"Palovaara","year":"2010","journal-title":"New Phytol"},{"key":"2025061311065178600_koaf096-B52","doi-asserted-by":"crossref","first-page":"323","DOI":"10.1002\/9781119312994.apr0540","volume-title":"Annual Plant Reviews online","author":"Plackett","year":"2017"},{"issue":"1","key":"2025061311065178600_koaf096-B53","doi-asserted-by":"publisher","first-page":"137","DOI":"10.1111\/nph.17314","article-title":"A novel Arabidopsis gene RGAT1 is required for GA-mediated tapetum and pollen development","volume":"231","author":"Qian","year":"2021","journal-title":"New Phytol"},{"key":"2025061311065178600_koaf096-B54","doi-asserted-by":"publisher","first-page":"100515","DOI":"10.1016\/j.stress.2024.100515","article-title":"Origin, evolution and diversity of SINA E3 ubiquitin ligases in plants","volume":"13","author":"Ren","year":"2024","journal-title":"Plant Stress"},{"issue":"3","key":"2025061311065178600_koaf096-B55","doi-asserted-by":"publisher","first-page":"488","DOI":"10.1111\/j.1365-313X.2007.03356.x","article-title":"The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle","volume":"53","author":"Rieu","year":"2008","journal-title":"Plant J"},{"issue":"7151","key":"2025061311065178600_koaf096-B56","doi-asserted-by":"publisher","first-page":"370","DOI":"10.1038\/nature05966","article-title":"A bacterial E3 ubiquitin ligase targets a host protein kinase to disrupt plant immunity","volume":"448","author":"Rosebrock","year":"2007","journal-title":"Nature"},{"issue":"11","key":"2025061311065178600_koaf096-B57","doi-asserted-by":"publisher","first-page":"656","DOI":"10.1016\/j.tplants.2012.06.005","article-title":"Molecular regulation of seed and fruit set","volume":"17","author":"Ruan","year":"2012","journal-title":"Trends Plant Sci"},{"key":"2025061311065178600_koaf096-B58","doi-asserted-by":"publisher","first-page":"1863","DOI":"10.1104\/pp.104.900115","article-title":"Erratum: an overview of gibberellin metabolism enzyme genes and their related mutants in rice (Plant Physiology (2004) 134 (1642\u20131653))","volume":"135","author":"Sakamoto","year":"2004","journal-title":"Plant Physiol"},{"issue":"9","key":"2025061311065178600_koaf096-B59","doi-asserted-by":"publisher","first-page":"2059","DOI":"10.1105\/tpc.002337","article-title":"Double jeopardy: both overexpression and suppression of a redox-activated plant mitogen-activated protein kinase render tobacco plants ozone sensitive","volume":"14","author":"Samuel","year":"2002","journal-title":"Plant Cell"},{"issue":"10","key":"2025061311065178600_koaf096-B60","doi-asserted-by":"publisher","first-page":"378","DOI":"10.1016\/S1360-1385(98)01302-8","article-title":"The regulation of transcription factor activity in plants","volume":"3","author":"Schwechheimer","year":"1998","journal-title":"Trends Plant Sci"},{"issue":"4","key":"2025061311065178600_koaf096-B61","doi-asserted-by":"publisher","first-page":"463","DOI":"10.1007\/s11103-008-9429-y","article-title":"Interaction of light and hormone signals in germinating seeds","volume":"69","author":"Seo","year":"2009","journal-title":"Plant Mol Biol."},{"issue":"6","key":"2025061311065178600_koaf096-B62","doi-asserted-by":"publisher","first-page":"e1003577","DOI":"10.1371\/journal.pgen.1003577","article-title":"ABI4 regulates primary seed dormancy by regulating the biogenesis of abscisic acid and gibberellins in Arabidopsis","volume":"9","author":"Shu","year":"2013","journal-title":"PLoS Genet"},{"issue":"12","key":"2025061311065178600_koaf096-B63","doi-asserted-by":"publisher","first-page":"3133","DOI":"10.1105\/tpc.003046","article-title":"Gibberellins are required for seed development and pollen tube growth in Arabidopsis","volume":"14","author":"Singh","year":"2002","journal-title":"Plant Cell"},{"issue":"4","key":"2025061311065178600_koaf096-B64","doi-asserted-by":"publisher","first-page":"779","DOI":"10.1111\/j.1558-5646.1980.tb04017.x","article-title":"Heterozygosity of a neutral locus linked to a self-incompatibility locus or a balanced lethal","volume":"34","author":"Strobeck","year":"1980","journal-title":"Evolution"},{"key":"2025061311065178600_koaf096-B65","doi-asserted-by":"publisher","first-page":"e0103","DOI":"10.1199\/tab.0103","article-title":"Gibberellin metabolism, perception and signaling pathways in Arabidopsis","volume":"6","author":"Sun","year":"2008","journal-title":"Arabidopsis Book"},{"issue":"1","key":"2025061311065178600_koaf096-B66","doi-asserted-by":"publisher","first-page":"13","DOI":"10.1079\/PGR200452","article-title":"Overcoming self-incompatibility in Eruca sativa by chemical treatment of stigmas","volume":"3","author":"Sun","year":"2005","journal-title":"Plant Genet Resour"},{"issue":"3","key":"2025061311065178600_koaf096-B67","doi-asserted-by":"publisher","first-page":"391","DOI":"10.1046\/j.1365-313X.1998.00217.x","article-title":"Over-expression of a tobacco homeobox gene,NTH15,decreases the expression of a gibberellin biosynthetic geneencoding GA 20-oxidase","volume":"15","author":"Tanaka-Ueguchib","year":"1998","journal-title":"Plant J"},{"issue":"9","key":"2025061311065178600_koaf096-B68","doi-asserted-by":"publisher","first-page":"3364","DOI":"10.1093\/plcell\/koac178","article-title":"Ubiquitinated DA1 negatively regulates vascular cambium activity through modulating the stability of WOX4 in Populus","volume":"34","author":"Tang","year":"2022","journal-title":"Plant Cell"},{"issue":"2","key":"2025061311065178600_koaf096-B69","doi-asserted-by":"publisher","first-page":"264","DOI":"10.1016\/j.devcel.2011.01.009","article-title":"Transcriptional activation of Arabidopsis axis patterning genes WOX8\/9 links zygote polarity to embryo development","volume":"20","author":"Ueda","year":"2011","journal-title":"Dev Cell"},{"key":"2025061311065178600_koaf096-B70","doi-asserted-by":"publisher","first-page":"225","DOI":"10.1007\/978-1-4939-8778-8_16","article-title":"Agrobacterium tumefaciens-mediated transformation of tomato","volume":"1864","author":"Van Eck","year":"2019","journal-title":"Methods Mol Biol"},{"issue":"6","key":"2025061311065178600_koaf096-B71","doi-asserted-by":"publisher","first-page":"385","DOI":"10.1038\/nrm2688","article-title":"The ubiquitin\u201326S proteasome system at the nexus of plant biology","volume":"10","author":"Vierstra","year":"2009","journal-title":"Nat Rev Mol Cell Biol."},{"issue":"3","key":"2025061311065178600_koaf096-B72","doi-asserted-by":"publisher","first-page":"505","DOI":"10.1111\/j.1365-313X.2008.03612.x","article-title":"Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL\/CIPK complexes in planta","volume":"56","author":"Waadt","year":"2008","journal-title":"Plant J"},{"issue":"3","key":"2025061311065178600_koaf096-B73","doi-asserted-by":"publisher","first-page":"689","DOI":"10.1111\/pce.13140","article-title":"Functional analysis of the seven in absentia ubiquitin ligase family in tomato","volume":"41","author":"Wang","year":"2018","journal-title":"Plant Cell Environ"},{"issue":"1","key":"2025061311065178600_koaf096-B74","doi-asserted-by":"publisher","first-page":"157","DOI":"10.1186\/1471-2229-12-157","article-title":"DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by tobacco mosaic virus","volume":"12","author":"Wang","year":"2012","journal-title":"BMC Plant Biol"},{"issue":"10","key":"2025061311065178600_koaf096-B75","doi-asserted-by":"publisher","first-page":"e0223521","DOI":"10.1371\/journal.pone.0223521","article-title":"Large-scale phylogenomic analysis suggests three ancient superclades of the WUSCHELRELATED HOMEOBOX transcription factor family in plants","volume":"14","author":"Wu","year":"2019","journal-title":"PLoS One"},{"issue":"2","key":"2025061311065178600_koaf096-B76","doi-asserted-by":"publisher","first-page":"306","DOI":"10.1016\/j.ydbio.2007.07.019","article-title":"Combinations of WOX activities regulate tissue proliferation during Arabidopsis embryonic development","volume":"309","author":"Wu","year":"2007","journal-title":"Dev Biol."},{"issue":"10","key":"2025061311065178600_koaf096-B77","doi-asserted-by":"publisher","first-page":"3290","DOI":"10.1105\/tpc.20.00267","article-title":"SINAT E3 ubiquitin ligases mediate FREE1 and VPS23A degradation to modulate abscisic acid signaling","volume":"32","author":"Xia","year":"2020","journal-title":"Plant Cell"},{"issue":"4","key":"2025061311065178600_koaf096-B78","doi-asserted-by":"publisher","first-page":"595","DOI":"10.1111\/j.1365-313X.2007.03259.x","article-title":"The N-terminal region of Pseudomonas type III effector AvrPtoB elicits Pto-dependent immunity and has two distinct virulence determinants","volume":"52","author":"Xiao","year":"2007","journal-title":"Plant J"},{"issue":"6903","key":"2025061311065178600_koaf096-B79","doi-asserted-by":"publisher","first-page":"167","DOI":"10.1038\/nature00998","article-title":"SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals","volume":"419","author":"Xie","year":"2002","journal-title":"Nature"},{"issue":"12","key":"2025061311065178600_koaf096-B80","doi-asserted-by":"publisher","first-page":"2115","DOI":"10.1105\/tpc.10.12.2115","article-title":"Phytochrome regulation and differential expression of gibberellin 3\u03b2-hydroxylase genes in germinating Arabidopsis seeds","volume":"10","author":"Yamaguchi","year":"1998","journal-title":"Plant Cell"},{"issue":"2","key":"2025061311065178600_koaf096-B81","doi-asserted-by":"publisher","first-page":"367","DOI":"10.1105\/tpc.018143","article-title":"Activation of gibberellin biosynthesis and response pathways by low temperature during imbibition of Arabidopsis thaliana seeds","volume":"16","author":"Yamauchi","year":"2004","journal-title":"Plant Cell"},{"issue":"1","key":"2025061311065178600_koaf096-B82","doi-asserted-by":"publisher","first-page":"47","DOI":"10.1016\/j.devcel.2017.03.014","article-title":"SINAT E3 ligases control the light-mediated stability of the brassinosteroid-activated transcription factor BES1 in Arabidopsis","volume":"41","author":"Yang","year":"2017","journal-title":"Dev Cell."},{"key":"2025061311065178600_koaf096-B83","doi-asserted-by":"publisher","first-page":"1205","DOI":"10.1093\/oxfordjournals.pcp.a078877","article-title":"Effects of gibberellins on seed germination of phytochrome-deficient mutants of Arabidopsis thaliana","volume":"36","author":"Yang","year":"1995","journal-title":"Plant Cell Physiol"},{"issue":"1","key":"2025061311065178600_koaf096-B84","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1093\/bioinformatics\/btac749","article-title":"AlphaPulldown\u2014a python package for protein\u2013protein interaction screens using AlphaFold-multimer","volume":"39","author":"Yu","year":"2023","journal-title":"Bioinformatics"},{"issue":"5","key":"2025061311065178600_koaf096-B85","doi-asserted-by":"publisher","first-page":"610","DOI":"10.1016\/j.molp.2019.03.013","article-title":"SINA E3 ubiquitin ligases: versatile moderators of plant growth and stress response","volume":"12","author":"Zhang","year":"2019","journal-title":"Mol Plant."},{"issue":"24","key":"2025061311065178600_koaf096-B86","doi-asserted-by":"publisher","first-page":"4857","DOI":"10.1016\/j.cub.2020.09.037","article-title":"A WOX\/auxin biosynthesis module controls growth to shape leaf form","volume":"30","author":"Zhang","year":"2020","journal-title":"Curr Biol."},{"issue":"9","key":"2025061311065178600_koaf096-B87","doi-asserted-by":"publisher","first-page":"1053","DOI":"10.1007\/s00299-019-02425-x","article-title":"The bHLH transcription factor SlPRE2 regulates tomato fruit development and modulates plant response to gibberellin","volume":"38","author":"Zhu","year":"2019","journal-title":"Plant Cell Rep"}],"container-title":["The Plant Cell"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/plcell\/advance-article-pdf\/doi\/10.1093\/plcell\/koaf096\/63045664\/koaf096.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/plcell\/article-pdf\/37\/6\/koaf096\/63045664\/koaf096.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/plcell\/article-pdf\/37\/6\/koaf096\/63045664\/koaf096.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,13]],"date-time":"2025-06-13T15:06:57Z","timestamp":1749827217000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/plcell\/article\/doi\/10.1093\/plcell\/koaf096\/8124108"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,5,2]]},"references-count":87,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2025,6,4]]}},"URL":"https:\/\/doi.org\/10.1093\/plcell\/koaf096","relation":{},"ISSN":["1040-4651","1532-298X"],"issn-type":[{"value":"1040-4651","type":"print"},{"value":"1532-298X","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2025,6]]},"published":{"date-parts":[[2025,5,2]]},"article-number":"koaf096"}}