{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,3]],"date-time":"2026-07-03T08:00:38Z","timestamp":1783065638935,"version":"3.54.6"},"reference-count":76,"publisher":"Oxford University Press (OUP)","issue":"1","license":[{"start":{"date-parts":[[2024,11,10]],"date-time":"2024-11-10T00:00:00Z","timestamp":1731196800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/pages\/standard-publication-reuse-rights"}],"funder":[{"DOI":"10.13039\/501100020414","name":"NSF","doi-asserted-by":"publisher","award":["MCB-1817985"],"award-info":[{"award-number":["MCB-1817985"]}],"id":[{"id":"10.13039\/501100020414","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2024,12,23]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>Plant fertility is fundamental to plant survival and requires the coordinated interaction of developmental pathways and signaling molecules. Nitric oxide (NO) is a small, gaseous signaling molecule that plays crucial roles in plant fertility as well as other developmental processes and stress responses. NO influences biological processes through S-nitrosation, the posttranslational modification of protein cysteines to S-nitrosocysteine (R-SNO). NO homeostasis is controlled by S-nitrosoglutathione reductase (GSNOR), which reduces S-nitrosoglutathione (GSNO), the major form of NO in cells. GSNOR mutants (hot5-2\/gsnor1) have defects in female gametophyte development along with elevated levels of reactive nitrogen species and R-SNOs. To better understand the fertility defects in hot5-2, we investigated the in vivo nitrosoproteome of Arabidopsis (Arabidopsis thaliana) floral tissues coupled with quantitative proteomics of pistils. To identify protein-SNOs, we used an organomercury-based method that involves direct reaction with S-nitrosocysteine, enabling specific identification of S-nitrosocysteine\u2013containing peptides and S-nitrosated proteins. We identified 1,102 endogenously S-nitrosated proteins in floral tissues, of which 1,049 were unique to hot5-2. Among the identified proteins, 728 were novel S-nitrosation targets. Notably, specific UDP-glycosyltransferases and argonaute proteins are S-nitrosated in floral tissues and differentially regulated in pistils. We also discovered S-nitrosation of subunits of the 26S proteasome together with increased abundance of proteasomal components and enhanced trypsin-like proteasomal activity in hot5-2 pistils. Our data establish a method for nitrosoprotein detection in plants, expand knowledge of the plant S-nitrosoproteome, and suggest that nitro-oxidative modification and NO homeostasis are critical to protein quality control in reproductive tissues.<\/jats:p>","DOI":"10.1093\/plphys\/kiae609","type":"journal-article","created":{"date-parts":[[2024,11,10]],"date-time":"2024-11-10T12:32:41Z","timestamp":1731241961000},"source":"Crossref","is-referenced-by-count":8,"title":["Disrupted nitric oxide homeostasis impacts fertility through multiple processes including protein quality control"],"prefix":"10.1093","volume":"197","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1720-5523","authenticated-orcid":false,"given":"Patrick","family":"Treffon","sequence":"first","affiliation":[{"name":"Department of Biochemistry and Molecular Biology, University of Massachusetts Amherst , Amherst, MA 01003 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0066-4881","authenticated-orcid":false,"given":"Elizabeth","family":"Vierling","sequence":"additional","affiliation":[{"name":"Department of Biochemistry and Molecular Biology, University of Massachusetts Amherst , Amherst, MA 01003 ,","place":["USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2024,11,10]]},"reference":[{"issue":"18","key":"2024122304010611900_kiae609-B1","doi-asserted-by":"publisher","first-page":"4368","DOI":"10.1002\/pmic.200800985","article-title":"Differential modulation of S-nitrosoproteome of Brassica juncea by low temperature: change in S-nitrosylation of Rubisco is responsible for the inactivation of its carboxylase activity","volume":"9","author":"Abat","year":"2009","journal-title":"Proteomics"},{"issue":"1","key":"2024122304010611900_kiae609-B2","doi-asserted-by":"publisher","first-page":"8669","DOI":"10.1038\/ncomms9669","article-title":"S-nitrosylation triggers ABI5 degradation to promote seed germination and seedling growth","volume":"6","author":"Albertos","year":"2015","journal-title":"Nat Commun"},{"key":"2024122304010611900_kiae609-B3","first-page":"103","volume-title":"Progress in botany","author":"Aranda-Ca\u00f1o","year":"2024"},{"issue":"19","key":"2024122304010611900_kiae609-B4","doi-asserted-by":"publisher","first-page":"6853","DOI":"10.1093\/jxb\/erac341","article-title":"Dynamics of nitration during dark-induced leaf senescence in Arabidopsis reveals proteins modified by tryptophan nitration","volume":"73","author":"Arasimowicz-Jelonek","year":"2022","journal-title":"J Exp Bot"},{"issue":"5","key":"2024122304010611900_kiae609-B5","doi-asserted-by":"publisher","first-page":"1101","DOI":"10.1016\/j.freeradbiomed.2012.06.032","article-title":"Protein S-nitrosylation: what's going on in plants?","volume":"53","author":"Astier","year":"2012","journal-title":"Free Radic Biol Med"},{"issue":"2","key":"2024122304010611900_kiae609-B6","doi-asserted-by":"publisher","first-page":"527","DOI":"10.1093\/jxb\/ert396","article-title":"Dual regulation of cytosolic ascorbate peroxidase (APX) by tyrosine nitration and S-nitrosylation","volume":"65","author":"Begara-Morales","year":"2014","journal-title":"J Exp Bot"},{"key":"2024122304010611900_kiae609-B7","doi-asserted-by":"publisher","first-page":"11","DOI":"10.1016\/j.bcp.2015.10.001","article-title":"The UDP-glycosyltransferase (UGT) superfamily expressed in humans, insects and plants: animal-plant arms-race and co-evolution","volume":"99","author":"Bock","year":"2016","journal-title":"Biochem Pharmacol"},{"issue":"2","key":"2024122304010611900_kiae609-B8","doi-asserted-by":"publisher","first-page":"460","DOI":"10.1105\/tpc.108.064444","article-title":"The RPN5 subunit of the 26 s proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis","volume":"21","author":"Book","year":"2009","journal-title":"Plant Cell"},{"issue":"10","key":"2024122304010611900_kiae609-B9","doi-asserted-by":"publisher","first-page":"2723","DOI":"10.1105\/tpc.105.034975","article-title":"The RPN1 subunit of the 26S proteasome in Arabidopsis is essential for embryogenesis","volume":"17","author":"Brukhin","year":"2005","journal-title":"Plant Cell"},{"issue":"8","key":"2024122304010611900_kiae609-B10","doi-asserted-by":"publisher","first-page":"1312","DOI":"10.1016\/j.molp.2021.05.004","article-title":"Redox sensor QSOX1 regulates plant immunity by targeting GSNOR to modulate ROS generation","volume":"14","author":"Chae","year":"2021","journal-title":"Mol Plant"},{"issue":"4","key":"2024122304010611900_kiae609-B11","doi-asserted-by":"publisher","first-page":"444","DOI":"10.1016\/j.devcel.2020.03.020","article-title":"Transnitrosylation mediated by the non-canonical catalase ROG1 regulates nitric oxide signaling in plants","volume":"53","author":"Chen","year":"2020","journal-title":"Dev Cell"},{"issue":"23","key":"2024122304010611900_kiae609-B12","doi-asserted-by":"publisher","first-page":"14951","DOI":"10.3390\/ijms232314951","article-title":"Nitric oxide in seed biology","volume":"23","author":"Ciacka","year":"2022","journal-title":"Int J Mol Sci"},{"issue":"7","key":"2024122304010611900_kiae609-B13","doi-asserted-by":"publisher","first-page":"889","DOI":"10.1093\/pcp\/pcac036","article-title":"Thiol-based oxidative posttranslational modifications (OxiPTMs) of plant proteins","volume":"63","author":"Corpas","year":"2022","journal-title":"Plant Cell Physiol"},{"issue":"4","key":"2024122304010611900_kiae609-B14","doi-asserted-by":"publisher","first-page":"417","DOI":"10.1111\/j.1399-3054.2007.01041.x","article-title":"Metabolism of salicylic acid in wild-type, ugt74f1 and ugt74f2 glucosyltransferase mutants of Arabidopsis thaliana","volume":"132","author":"Dean","year":"2008","journal-title":"Physiol Plant"},{"key":"2024122304010611900_kiae609-B15","doi-asserted-by":"publisher","first-page":"183","DOI":"10.1007\/978-1-61779-364-6_13","volume-title":"Chemical proteomics","author":"De Jong","year":"2012"},{"issue":"4","key":"2024122304010611900_kiae609-B16","doi-asserted-by":"publisher","first-page":"1766","DOI":"10.1104\/pp.113.222703","article-title":"S-Nitrosylation of ascorbate peroxidase is part of programmed cell death signaling in tobacco bright yellow-2 cells","volume":"163","author":"De Pinto","year":"2013","journal-title":"Plant Physiol"},{"issue":"1","key":"2024122304010611900_kiae609-B17","doi-asserted-by":"publisher","first-page":"e69","DOI":"10.1002\/cpps.69","article-title":"Analysis of cysteine post translational modifications using organic mercury resin","volume":"94","author":"Doulias","year":"2018","journal-title":"Curr Protoc Protein Sci"},{"issue":"39","key":"2024122304010611900_kiae609-B18","doi-asserted-by":"publisher","first-page":"16958","DOI":"10.1073\/pnas.1008036107","article-title":"Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation","volume":"107","author":"Doulias","year":"2010","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"256","key":"2024122304010611900_kiae609-B19","doi-asserted-by":"publisher","first-page":"rs1","DOI":"10.1126\/scisignal.2003252","article-title":"Nitric oxide regulates mitochondrial fatty acid metabolism through reversible protein S-nitrosylation","volume":"6","author":"Doulias","year":"2013","journal-title":"Sci Signal"},{"key":"2024122304010611900_kiae609-B20","doi-asserted-by":"publisher","first-page":"e0155","DOI":"10.1199\/tab.0155","article-title":"The female gametophyte","volume":"9","author":"Drews","year":"2011","journal-title":"Arabidopsis Book"},{"issue":"2","key":"2024122304010611900_kiae609-B21","doi-asserted-by":"publisher","first-page":"152","DOI":"10.3390\/antiox10020152","article-title":"Function and regulation of chloroplast peroxiredoxin IIE","volume":"10","author":"Dreyer","year":"2021","journal-title":"Antioxidants"},{"issue":"2","key":"2024122304010611900_kiae609-B22","doi-asserted-by":"publisher","first-page":"272","DOI":"10.1105\/tpc.15.00920","article-title":"RNAi in plants: an argonaute-centered view","volume":"28","author":"Fang","year":"2016","journal-title":"Plant Cell"},{"issue":"2","key":"2024122304010611900_kiae609-B23","doi-asserted-by":"publisher","first-page":"119","DOI":"10.1016\/j.freeradbiomed.2008.09.034","article-title":"Detection of protein S-nitrosylation with the biotin-switch technique","volume":"46","author":"Forrester","year":"2009","journal-title":"Free Radic Biol Med"},{"issue":"8","key":"2024122304010611900_kiae609-B24","doi-asserted-by":"publisher","first-page":"2628","DOI":"10.1093\/bioinformatics\/btz931","article-title":"ShinyGO: a graphical gene-set enrichment tool for animals and plants","volume":"36","author":"Ge","year":"2020","journal-title":"Bioinformatics"},{"issue":"3","key":"2024122304010611900_kiae609-B25","doi-asserted-by":"publisher","first-page":"252","DOI":"10.1016\/j.niox.2008.07.003","article-title":"Is ascorbate able to reduce disulfide bridges? A cautionary note","volume":"19","author":"Giustarini","year":"2008","journal-title":"Nitric Oxide"},{"issue":"17","key":"2024122304010611900_kiae609-B26","doi-asserted-by":"publisher","first-page":"2452","DOI":"10.1021\/acs.biochem.5b01373","article-title":"S-nitrosation of conserved cysteines modulates activity and stability of S-nitrosoglutathione reductase (GSNOR)","volume":"55","author":"Guerra","year":"2016","journal-title":"Biochemistry"},{"issue":"2","key":"2024122304010611900_kiae609-B27","doi-asserted-by":"publisher","first-page":"228","DOI":"10.1016\/j.molp.2021.12.012","article-title":"Nitric oxide regulation of plant metabolism","volume":"15","author":"Gupta","year":"2022","journal-title":"Mol Plant"},{"issue":"3","key":"2024122304010611900_kiae609-B28","doi-asserted-by":"publisher","first-page":"1045","DOI":"10.1534\/genetics.116.188151","article-title":"A multigenic network of ARGONAUTE4 clade members controls early megaspore formation in Arabidopsis","volume":"204","author":"Hernandez-Lagana","year":"2016","journal-title":"Genetics"},{"issue":"4","key":"2024122304010611900_kiae609-B29","doi-asserted-by":"publisher","first-page":"769","DOI":"10.1105\/tpc.13.4.769","article-title":"A novel UDP-glucose transferase is part of the callose synthase complex and interacts with phragmoplastin at the forming cell plate","volume":"13","author":"Hong","year":"2001","journal-title":"Plant Cell"},{"issue":"4","key":"2024122304010611900_kiae609-B30","doi-asserted-by":"publisher","first-page":"1731","DOI":"10.1104\/pp.15.00026","article-title":"Site-specific nitrosoproteomic identification of endogenously S-nitrosylated proteins in Arabidopsis","volume":"167","author":"Hu","year":"2015","journal-title":"Plant Physiol"},{"issue":"11","key":"2024122304010611900_kiae609-B31","doi-asserted-by":"publisher","first-page":"1426","DOI":"10.3390\/plants9111426","article-title":"Thioredoxins: emerging players in the regulation of protein S-nitrosation in plants","volume":"9","author":"Jedelsk\u00e1","year":"2020","journal-title":"Plants"},{"issue":"4","key":"2024122304010611900_kiae609-B32","doi-asserted-by":"publisher","first-page":"279","DOI":"10.1016\/j.niox.2009.02.005","article-title":"Nitric oxide regulates the 26S proteasome in vascular smooth muscle cells","volume":"20","author":"Kapadia","year":"2009","journal-title":"Nitric Oxide"},{"issue":"1","key":"2024122304010611900_kiae609-B33","doi-asserted-by":"publisher","first-page":"153","DOI":"10.1016\/j.molcel.2014.08.003","article-title":"Selective protein denitrosylation activity of thioredoxin-h5 modulates plant immunity","volume":"56","author":"Kneeshaw","year":"2014","journal-title":"Mol Cell"},{"issue":"3","key":"2024122304010611900_kiae609-B34","doi-asserted-by":"publisher","first-page":"777","DOI":"10.1093\/jxb\/erab013","article-title":"The role of nitric oxide in plant biology: current insights and future perspectives","volume":"72","author":"Kolbert","year":"2021","journal-title":"J Exp Bot"},{"key":"2024122304010611900_kiae609-B35","doi-asserted-by":"publisher","first-page":"114","DOI":"10.3389\/fchem.2014.00114","article-title":"Protein S-nitrosylation: specificity and identification strategies in plants","volume":"2","author":"Lamotte","year":"2015","journal-title":"Front Chem."},{"issue":"2","key":"2024122304010611900_kiae609-B36","doi-asserted-by":"publisher","first-page":"347","DOI":"10.1016\/j.bbrc.2005.12.013","article-title":"Ascorbic acid reduction of microtubule protein disulfides and its relevance to protein S-nitrosylation assays","volume":"340","author":"Landino","year":"2006","journal-title":"Biochem Biophys Res Commun"},{"issue":"30","key":"2024122304010611900_kiae609-B37","doi-asserted-by":"publisher","first-page":"1350","DOI":"10.3791\/1350","article-title":"Staining of proteins in gels with coomassie G-250 without organic solvent and acetic acid","author":"Lawrence","year":"2009","journal-title":"J Vis Exp"},{"issue":"3","key":"2024122304010611900_kiae609-B38","doi-asserted-by":"publisher","first-page":"786","DOI":"10.1105\/tpc.107.052647","article-title":"Modulation of nitrosative stress by S-nitrosoglutathione reductase is critical for thermotolerance and plant growth in Arabidopsis","volume":"20","author":"Lee","year":"2008","journal-title":"Plant Cell"},{"issue":"6","key":"2024122304010611900_kiae609-B39","doi-asserted-by":"publisher","first-page":"725","DOI":"10.1016\/j.chembiol.2017.05.010","article-title":"Proteasome activation by small molecules","volume":"24","author":"Leestemaker","year":"2017","journal-title":"Cell Chem Biol"},{"issue":"2","key":"2024122304010611900_kiae609-B40","doi-asserted-by":"publisher","first-page":"156","DOI":"10.1016\/j.tplants.2020.09.004","article-title":"The emerging role of GSNOR in oxidative stress regulation","volume":"26","author":"Li","year":"2020","journal-title":"Trends Plant Sci"},{"issue":"7","key":"2024122304010611900_kiae609-B41","doi-asserted-by":"publisher","first-page":"6397","DOI":"10.3390\/ijms24076397","article-title":"Advances in nitric oxide signalling and metabolism in plants","volume":"24","author":"Liao","year":"2023","journal-title":"Int J Mol Sci"},{"issue":"3","key":"2024122304010611900_kiae609-B42","doi-asserted-by":"publisher","first-page":"921","DOI":"10.1104\/pp.104.058719","article-title":"Proteomic identification of S-nitrosylated proteins in Arabidopsis","volume":"137","author":"Lindermayr","year":"2005","journal-title":"Plant Physiol"},{"key":"2024122304010611900_kiae609-B43","doi-asserted-by":"publisher","first-page":"40","DOI":"10.3389\/fmolb.2019.00040","article-title":"Dynamic regulation of the 26S proteasome: from synthesis to degradation","volume":"6","author":"Marshall","year":"2019","journal-title":"Front Mol Biosci"},{"key":"2024122304010611900_kiae609-B44","doi-asserted-by":"publisher","first-page":"102387","DOI":"10.1016\/j.redox.2022.102387","article-title":"Structural snapshots of nitrosoglutathione binding and reactivity underlying S-nitrosylation of photosynthetic GAPDH","volume":"54","author":"Mattioli","year":"2022","journal-title":"Redox Biol"},{"issue":"7","key":"2024122304010611900_kiae609-B45","doi-asserted-by":"publisher","first-page":"447","DOI":"10.1038\/nrg3462","article-title":"Argonaute proteins: functional insights and emerging roles","volume":"14","author":"Meister","year":"2013","journal-title":"Nat Rev Genet"},{"issue":"(8","key":"2024122304010611900_kiae609-B46","doi-asserted-by":"publisher","first-page":"967","DOI":"10.1016\/j.bbapap.2016.01.005","article-title":"Redox proteomics for the assessment of redox-related posttranslational regulation in plants","volume":"1864","author":"Mock","year":"2016","journal-title":"Biochim Biophys Acta"},{"issue":"12","key":"2024122304010611900_kiae609-B47","doi-asserted-by":"publisher","first-page":"4886","DOI":"10.1073\/pnas.0700481104","article-title":"Reduction of 1-Cys peroxiredoxins by ascorbate changes the thiol-specific antioxidant paradigm, revealing another function of vitamin C","volume":"104","author":"Monteiro","year":"2007","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"7288","key":"2024122304010611900_kiae609-B48","doi-asserted-by":"publisher","first-page":"628","DOI":"10.1038\/nature08828","article-title":"Control of female gamete formation by a small RNA pathway in Arabidopsis","volume":"464","author":"Olmedo-Monfil","year":"2010","journal-title":"Nature"},{"issue":"6","key":"2024122304010611900_kiae609-B49","doi-asserted-by":"publisher","first-page":"684","DOI":"10.1016\/j.bbagen.2011.05.009","article-title":"Strategies and tools to explore protein S-nitrosylation","volume":"1820","author":"Raju","year":"2012","journal-title":"Biochim Biophys Acta"},{"issue":"12","key":"2024122304010611900_kiae609-B50","doi-asserted-by":"publisher","first-page":"4120","DOI":"10.1105\/tpc.107.055061","article-title":"S-nitrosylation of peroxiredoxin II E promotes peroxynitrite-mediated tyrosine nitration","volume":"19","author":"Romero-Puertas","year":"2007","journal-title":"Plant Cell"},{"issue":"2","key":"2024122304010611900_kiae609-B51","doi-asserted-by":"publisher","first-page":"REVIEWS3004","DOI":"10.1186\/gb-2001-2-2-reviews3004","article-title":"Higher plant glycosyltransferases","volume":"2","author":"Ross","year":"2001","journal-title":"Genome Biol"},{"issue":"7","key":"2024122304010611900_kiae609-B52","doi-asserted-by":"publisher","first-page":"671","DOI":"10.1038\/nmeth.2089","article-title":"NIH image to ImageJ: 25 years of image analysis","volume":"9","author":"Schneider","year":"2012","journal-title":"Nat Methods"},{"issue":"9","key":"2024122304010611900_kiae609-B53","doi-asserted-by":"publisher","first-page":"1350","DOI":"10.1016\/j.molp.2015.04.008","article-title":"Loss of GSNOR1 function leads to compromised auxin signaling and polar auxin transport","volume":"8","author":"Shi","year":"2015","journal-title":"Mol Plant"},{"issue":"1","key":"2024122304010611900_kiae609-B54","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1105\/tpc.010381","article-title":"Cytokinin growth responses in Arabidopsis involve the 26S proteasome subunit RPN12","volume":"14","author":"Smalle","year":"2002","journal-title":"Plant Cell"},{"issue":"4","key":"2024122304010611900_kiae609-B55","doi-asserted-by":"publisher","first-page":"965","DOI":"10.1105\/tpc.009217","article-title":"The pleiotropic role of the 26S proteasome subunit RPN10 in Arabidopsis growth and development supports a substrate-specific function in abscisic acid signaling","volume":"15","author":"Smalle","year":"2003","journal-title":"Plant Cell"},{"issue":"1","key":"2024122304010611900_kiae609-B56","doi-asserted-by":"publisher","first-page":"444","DOI":"10.1073\/pnas.89.1.444","article-title":"S-nitrosylation of proteins with nitric oxide: synthesis and characterization of biologically active compounds","volume":"89","author":"Stamler","year":"1992","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"48","key":"2024122304010611900_kiae609-B57","doi-asserted-by":"publisher","first-page":"18285","DOI":"10.1074\/jbc.RA119.011067","article-title":"AKR1A1 is a novel mammalian S-nitroso-glutathione reductase","volume":"294","author":"Stomberski","year":"2019","journal-title":"J Biol Chem"},{"key":"2024122304010611900_kiae609-B58","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1016\/j.freeradbiomed.2018.10.447","article-title":"Oxidation resistance 1 regulates post-translational modifications of peroxiredoxin 2 in the cerebellum","volume":"130","author":"Svistunova","year":"2019","journal-title":"Free Radic Biol Med"},{"key":"2024122304010611900_kiae609-B59","doi-asserted-by":"publisher","first-page":"113411","DOI":"10.1016\/j.envpol.2019.113411","article-title":"Low endogenous NO levels in roots and antioxidant systems are determinants for the resistance of Arabidopsis seedlings grown in Cd","volume":"256","author":"Terron-Camero","year":"2020","journal-title":"Environ Pollut"},{"issue":"6","key":"2024122304010611900_kiae609-B60","doi-asserted-by":"publisher","first-page":"914","DOI":"10.1111\/j.1365-313X.2004.02016.x","article-title":"Mapman: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes","volume":"37","author":"Thimm","year":"2004","journal-title":"Plant J"},{"issue":"8","key":"2024122304010611900_kiae609-B61","doi-asserted-by":"publisher","first-page":"2660","DOI":"10.1105\/tpc.109.071316","article-title":"Perturbation of indole-3-butyric acid homeostasis by the UDP-glucosyltransferase UGT74E2 modulates Arabidopsis architecture and water stress tolerance","volume":"22","author":"Tognetti","year":"2010","journal-title":"Plant Cell"},{"key":"2024122304010611900_kiae609-B62","doi-asserted-by":"publisher","first-page":"787435","DOI":"10.3389\/fpls.2021.787435","article-title":"Quantitative proteome profiling of a s-nitrosoglutathione reductase (GSNOR) null mutant reveals a new class of enzymes involved in nitric oxide homeostasis in plants","volume":"12","author":"Treffon","year":"2021","journal-title":"Front Plant Sci"},{"issue":"7","key":"2024122304010611900_kiae609-B63","doi-asserted-by":"publisher","first-page":"1411","DOI":"10.3390\/antiox11071411","article-title":"Focus on nitric oxide homeostasis: direct and indirect enzymatic regulation of protein denitrosation reactions in plants","volume":"11","author":"Treffon","year":"2022","journal-title":"Antioxidants"},{"issue":"16","key":"2024122304010611900_kiae609-B64","doi-asserted-by":"publisher","first-page":"4843","DOI":"10.1093\/jxb\/eraa195","article-title":"A glutathione-dependent control of the indole butyric acid pathway supports Arabidopsis root system adaptation to phosphate deprivation","volume":"71","author":"Trujillo-Hernandez","year":"2020","journal-title":"J Exp Bot"},{"issue":"12","key":"2024122304010611900_kiae609-B65","doi-asserted-by":"publisher","first-page":"4900","DOI":"10.1073\/pnas.0810595106","article-title":"S-nitrosylation of XIAP compromises neuronal survival in Parkinson's disease","volume":"106","author":"Tsang","year":"2009","journal-title":"Proc Natl Acad Sci U S A."},{"issue":"8","key":"2024122304010611900_kiae609-B66","doi-asserted-by":"publisher","first-page":"1399","DOI":"10.1242\/dev.075390","article-title":"Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis","volume":"139","author":"Tucker","year":"2012","journal-title":"Development"},{"issue":"9","key":"2024122304010611900_kiae609-B67","doi-asserted-by":"publisher","first-page":"731","DOI":"10.1038\/nmeth.3901","article-title":"The perseus computational platform for comprehensive analysis of (prote)omics data","volume":"13","author":"Tyanova","year":"2016","journal-title":"Nat Methods"},{"issue":"9","key":"2024122304010611900_kiae609-B68","doi-asserted-by":"publisher","first-page":"1211","DOI":"10.1111\/j.1365-3040.2009.01978.x","article-title":"A guide to using MapMan to visualize and compare omics data in plants: a case study in the crop species, maize","volume":"32","author":"Usadel","year":"2009","journal-title":"Plant Cell Environ"},{"issue":"17","key":"2024122304010611900_kiae609-B69","doi-asserted-by":"publisher","first-page":"e2532","DOI":"10.21769\/BioProtoc.2532","article-title":"Ubiquitin proteasome activity measurement in total plant extracts","volume":"7","author":"\u00dcst\u00fcn","year":"2017","journal-title":"Bio Protoc."},{"issue":"6","key":"2024122304010611900_kiae609-B70","doi-asserted-by":"publisher","first-page":"2201","DOI":"10.1093\/plcell\/koae043","article-title":"Maternal nitric oxide homeostasis impacts female gametophyte development under optimal and stress conditions","volume":"36","author":"Wang","year":"2024","journal-title":"Plant Cell"},{"issue":"6","key":"2024122304010611900_kiae609-B71","doi-asserted-by":"publisher","first-page":"2261","DOI":"10.1111\/nph.17152","article-title":"Auxin efflux controls orderly nucellar degeneration and expansion of the female gametophyte in Arabidopsis","volume":"230","author":"Wang","year":"2021","journal-title":"New Phytol"},{"issue":"7","key":"2024122304010611900_kiae609-B72","doi-asserted-by":"publisher","first-page":"1362","DOI":"10.1016\/j.freeradbiomed.2007.12.032","article-title":"Copper dependence of the biotin switch assay: modified assay for measuring cellular and blood nitrosated proteins","volume":"44","author":"Wang","year":"2008","journal-title":"Free Radic Biol Med"},{"issue":"17","key":"2024122304010611900_kiae609-B73","doi-asserted-by":"publisher","first-page":"9656","DOI":"10.3390\/ijms22179656","article-title":"Molecular mechanisms of nitric oxide (NO) signaling and reactive oxygen species (ROS) homeostasis during abiotic stresses in plants","volume":"22","author":"Wani","year":"2021","journal-title":"Int J Mol Sci"},{"key":"2024122304010611900_kiae609-B74","doi-asserted-by":"publisher","first-page":"430","DOI":"10.3389\/fpls.2013.00430","article-title":"S-nitrosoglutathione reductases are low-copy number, cysteine-rich proteins in plants that control multiple developmental and defense responses in Arabidopsis","volume":"4","author":"Xu","year":"2013","journal-title":"Front Plant Sci"},{"issue":"31","key":"2024122304010611900_kiae609-B75","doi-asserted-by":"publisher","first-page":"22777","DOI":"10.1074\/jbc.M113.475467","article-title":"Mechanisms of nitrosylation and denitrosylation of cytoplasmic glyceraldehyde-3-phosphate dehydrogenase from Arabidopsis thaliana","volume":"288","author":"Zaffagnini","year":"2013","journal-title":"J Biol Chem"},{"issue":"1","key":"2024122304010611900_kiae609-B76","doi-asserted-by":"publisher","first-page":"8001","DOI":"10.1038\/s41467-023-43705-1","article-title":"Nitric oxide controls shoot meristem activity via regulation of DNA methylation","volume":"14","author":"Zeng","year":"2023","journal-title":"Nat Commun"}],"container-title":["Plant Physiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/plphys\/advance-article-pdf\/doi\/10.1093\/plphys\/kiae609\/61048483\/kiae609.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/plphys\/article-pdf\/197\/1\/kiae609\/61048483\/kiae609.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/plphys\/article-pdf\/197\/1\/kiae609\/61048483\/kiae609.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,12,22]],"date-time":"2024-12-22T23:01:49Z","timestamp":1734908509000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/plphys\/article\/doi\/10.1093\/plphys\/kiae609\/7889058"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,11,10]]},"references-count":76,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2024,12,23]]}},"URL":"https:\/\/doi.org\/10.1093\/plphys\/kiae609","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2024.07.30.605885","asserted-by":"object"}]},"ISSN":["0032-0889","1532-2548"],"issn-type":[{"value":"0032-0889","type":"print"},{"value":"1532-2548","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2025,1]]},"published":{"date-parts":[[2024,11,10]]},"article-number":"kiae609"}}