{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,3]],"date-time":"2026-03-03T15:17:08Z","timestamp":1772551028768,"version":"3.50.1"},"reference-count":13,"publisher":"Oxford University Press (OUP)","issue":"13","license":[{"start":{"date-parts":[[2016,10,2]],"date-time":"2016-10-02T00:00:00Z","timestamp":1475366400000},"content-version":"vor","delay-in-days":590,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2015,7,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: EpiToolKit is a virtual workbench for immunological questions with a focus on vaccine design. It offers an array of immunoinformatics tools covering MHC genotyping, epitope and neo-epitope prediction, epitope selection for vaccine design, and epitope assembly. In its recently re-implemented version 2.0, EpiToolKit provides a range of new functionality and for the first time allows combining tools into complex workflows. For inexperienced users it offers simplified interfaces to guide the users through the analysis of complex immunological data sets.<\/jats:p>\n               <jats:p>Availability and implementation: \u00a0http:\/\/www.epitoolkit.de<\/jats:p>\n               <jats:p>Contact: \u00a0schubert@informatik.uni-tuebingen.de<\/jats:p>\n               <jats:p>Supplementary information: \u00a0Supplementary data are available at Bioinformatics online.<\/jats:p>","DOI":"10.1093\/bioinformatics\/btv116","type":"journal-article","created":{"date-parts":[[2015,2,26]],"date-time":"2015-02-26T08:54:32Z","timestamp":1424940872000},"page":"2211-2213","source":"Crossref","is-referenced-by-count":34,"title":["EpiToolKit\u2014a web-based workbench for vaccine design"],"prefix":"10.1093","volume":"31","author":[{"given":"Benjamin","family":"Schubert","sequence":"first","affiliation":[{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"},{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"}]},{"given":"Hans-Philipp","family":"Brachvogel","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"}]},{"given":"Christopher","family":"J\u00fcrges","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"}]},{"given":"Oliver","family":"Kohlbacher","sequence":"additional","affiliation":[{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"},{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"},{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"},{"name":"1 Center for Bioinformatics, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany, 2Applied Bioinformatics, Department of Computer Science, 72076 T\u00fcbingen, Germany, 3Quantitative Biology Center, 72076 T\u00fcbingen, Germany and 4Faculty of Medicine, University of T\u00fcbingen, 72076 T\u00fcbingen, Germany"}]}],"member":"286","published-online":{"date-parts":[[2015,2,20]]},"reference":[{"key":"2023020202140359600_btv116-B1","doi-asserted-by":"crossref","first-page":"94","DOI":"10.1016\/j.jim.2012.09.004","article-title":"miHA-Match: computational detection of tissue-specific minor histocompatibility antigens","volume":"386","author":"Feldhahn","year":"2012","journal-title":"J. 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