{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,26]],"date-time":"2026-03-26T14:41:35Z","timestamp":1774536095481,"version":"3.50.1"},"reference-count":117,"publisher":"Oxford University Press (OUP)","issue":"1","license":[{"start":{"date-parts":[[2023,8,14]],"date-time":"2023-08-14T00:00:00Z","timestamp":1691971200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/pages\/standard-publication-reuse-rights"}],"funder":[{"name":"HybridChange","award":["PTDC\/BIA-EVL\/1307\/2020"],"award-info":[{"award-number":["PTDC\/BIA-EVL\/1307\/2020"]}]},{"DOI":"10.13039\/501100001871","name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","doi-asserted-by":"publisher","award":["2021.00150.CEECIND"],"award-info":[{"award-number":["2021.00150.CEECIND"]}],"id":[{"id":"10.13039\/501100001871","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2024,1,2]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>The broom hare (Lepus castroviejoi) is a threatened Iberian endemic, for which there is limited knowledge. We use genetic non-invasive sampling (gNIS; N\u2005=\u2005185 faeces samples) and specimens from hunting and roadkills (N\u2005=\u200522) in conjunction with a 15-microsatellite panel and a 541-bp fragment of cytochrome-b to assess the genetic diversity, population structure and evolutionary history of this species. Populations from the other four European hare species were also analysed to accurately compare the genetic diversity patterns and infer admixture. Species identification from gNIS was inferred using small fragments of cytochrome-b and transferrin genes and individual identification was obtained using microsatellites. The broom hare population showed the lowest level of nuclear DNA diversity of all analysed hare species (N\u2005=\u200576; Na\u2005=\u20052.53, He\u2005=\u20050.186 and Fis\u2005=\u20050.341) and very low mitochondrial DNA diversity (N\u2005=\u200564; Hd\u2005=\u20050.743 and \u03c0\u2005=\u20050.01543). Only the Italian hare (L. corsicanus) showed a similar pattern of low genetic diversity. No hybridization with the neighbouring hare species was detected. However, two mitochondrial DNA lineages, corresponding to two ancient events of introgression of mountain hare (L. timidus) origin, were characterized. There was evidence for shallow spatial population differentiation of the broom hare. The described reduced genetic diversity, associated with a narrow distribution range and recent population declines, represents a risk of population extinction, and highlights the need for conservation measures of this endemic threatened hare species.<\/jats:p>","DOI":"10.1093\/biolinnean\/blad080","type":"journal-article","created":{"date-parts":[[2023,8,14]],"date-time":"2023-08-14T21:00:18Z","timestamp":1692046818000},"page":"148-167","source":"Crossref","is-referenced-by-count":5,"title":["Low genetic diversity and shallow population structure in the broom hare, <i>Lepus castroviejoi<\/i> (Lagomorpha: Leporidae)"],"prefix":"10.1093","volume":"141","author":[{"given":"Jos\u00e9","family":"Costa","sequence":"first","affiliation":[{"name":"CIBIO, Centro de Investiga\u00e7\u00e3o em Biodiversidade e Recursos Gen\u00e9ticos, InBIO Laborat\u00f3rio Associado, Campus de Vair\u00e3o, Universidade do Porto , 4485-661 Vair\u00e3o , Portugal"},{"name":"Departamento de Biologia, Faculdade de Ci\u00eancias, Universidade do Porto , 4099-002 Porto , Portugal"},{"name":"BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO , Campus de Vair\u00e3o, 4485-661 Vair\u00e3o , Portugal"}]},{"given":"Jo\u00e3o","family":"Queir\u00f3s","sequence":"additional","affiliation":[{"name":"CIBIO, Centro de Investiga\u00e7\u00e3o em Biodiversidade e Recursos Gen\u00e9ticos, InBIO Laborat\u00f3rio Associado, Campus de Vair\u00e3o, Universidade do Porto , 4485-661 Vair\u00e3o , Portugal"},{"name":"Departamento de Biologia, Faculdade de Ci\u00eancias, Universidade do Porto , 4099-002 Porto , Portugal"},{"name":"BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO , Campus de Vair\u00e3o, 4485-661 Vair\u00e3o , Portugal"}]},{"given":"Fernando","family":"Ballesteros","sequence":"additional","affiliation":[{"name":"Brown Bear Foundation , Santander , Spain"}]},{"given":"Nadia","family":"Mucci","sequence":"additional","affiliation":[{"name":"Istituto Superiore per la Protezione e la Ricerca Ambientale (ISPRA) Via C\u00e0 Fornacetta , 9 40064 Ozzano E. (BO) , Italy"}]},{"given":"Jo\u00e3o","family":"Souto","sequence":"additional","affiliation":[{"name":"CIBIO, Centro de Investiga\u00e7\u00e3o em Biodiversidade e Recursos Gen\u00e9ticos, InBIO Laborat\u00f3rio Associado, Campus de Vair\u00e3o, Universidade do Porto , 4485-661 Vair\u00e3o , Portugal"},{"name":"Departamento de Biologia, Faculdade de Ci\u00eancias, Universidade do Porto , 4099-002 Porto , Portugal"},{"name":"BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO , Campus de Vair\u00e3o, 4485-661 Vair\u00e3o , Portugal"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9680-3494","authenticated-orcid":false,"given":"Eug\u00e9nio","family":"Silva","sequence":"additional","affiliation":[{"name":"CIBIO, Centro de Investiga\u00e7\u00e3o em Biodiversidade e Recursos Gen\u00e9ticos, InBIO Laborat\u00f3rio Associado, Campus de Vair\u00e3o, Universidade do Porto , 4485-661 Vair\u00e3o , Portugal"},{"name":"Departamento de Biologia, Faculdade de Ci\u00eancias, Universidade do Porto , 4099-002 Porto , Portugal"},{"name":"BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO , Campus de Vair\u00e3o, 4485-661 Vair\u00e3o , Portugal"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4473-1908","authenticated-orcid":false,"given":"Jos\u00e9","family":"Melo-Ferreira","sequence":"additional","affiliation":[{"name":"CIBIO, Centro de Investiga\u00e7\u00e3o em Biodiversidade e Recursos Gen\u00e9ticos, InBIO Laborat\u00f3rio Associado, Campus de Vair\u00e3o, Universidade do Porto , 4485-661 Vair\u00e3o , Portugal"},{"name":"Departamento de Biologia, Faculdade de Ci\u00eancias, Universidade do Porto , 4099-002 Porto , Portugal"},{"name":"BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO , Campus de Vair\u00e3o, 4485-661 Vair\u00e3o , Portugal"}]},{"given":"Paulo C\u00e9lio","family":"Alves","sequence":"additional","affiliation":[{"name":"CIBIO, Centro de Investiga\u00e7\u00e3o em Biodiversidade e Recursos Gen\u00e9ticos, InBIO Laborat\u00f3rio Associado, Campus de Vair\u00e3o, Universidade do Porto , 4485-661 Vair\u00e3o , Portugal"},{"name":"Departamento de Biologia, Faculdade de Ci\u00eancias, Universidade do Porto , 4099-002 Porto , Portugal"},{"name":"BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO , Campus de Vair\u00e3o, 4485-661 Vair\u00e3o , Portugal"},{"name":"EBM \u2013 Esta\u00e7\u00e3o Biol\u00f3gica de M\u00e9rtola, Pra\u00e7a Lu\u00eds de Cam\u00f5es, M\u00e9rtola , 7750-329 M\u00e9rtola , Portugal"}]}],"member":"286","published-online":{"date-parts":[[2023,8,14]]},"reference":[{"key":"2024010815354335200_CIT0001","doi-asserted-by":"crossref","first-page":"977","DOI":"10.1111\/jbi.12270","article-title":"Evidence for niche similarities in the allopatric sister species Lepus castroviejoi and Lepus corsicanus","volume":"41","author":"Acevedo","year":"2014","journal-title":"Journal of Biogeography"},{"key":"2024010815354335200_CIT0002","doi-asserted-by":"crossref","first-page":"199","DOI":"10.1007\/978-1-4612-1694-0_15","article-title":"Information theory and an extension of the maximum likelihood principle","volume-title":"Selected papers of Hirotugu Akaike","author":"Akaike","year":"1998"},{"key":"2024010815354335200_CIT0003","doi-asserted-by":"crossref","first-page":"1191","DOI":"10.1016\/j.ympev.2007.11.010","article-title":"Evidence for genetic similarity of two allopatric European hares (Lepus corsicanus and L. castroviejoi) inferred from nuclear DNA sequences","volume":"46","author":"Alves","year":"2008","journal-title":"Molecular Phylogenetics and Evolution"},{"key":"2024010815354335200_CIT0004","first-page":"137","article-title":"Die iberischen Hasen","volume":"3","author":"Alves","year":"2003","journal-title":"Handbuch der S\u00e4ugetiere Europas"},{"key":"2024010815354335200_CIT0005","doi-asserted-by":"crossref","first-page":"70","DOI":"10.1016\/S1055-7903(02)00417-7","article-title":"Ancient introgression of Lepus timidus mtDNA into L. granatensis and L. europaeus in the Iberian Peninsula","volume":"27","author":"Alves","year":"2003","journal-title":"Molecular Phylogenetics and Evolution"},{"key":"2024010815354335200_CIT0006","first-page":"45","article-title":"Are Lepus corsicanus and L. castroviejoi conspecific? 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