{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,4]],"date-time":"2026-04-04T00:00:40Z","timestamp":1775260840983,"version":"3.50.1"},"reference-count":81,"publisher":"Oxford University Press (OUP)","issue":"2","license":[{"start":{"date-parts":[[2018,12,13]],"date-time":"2018-12-13T00:00:00Z","timestamp":1544659200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"DOI":"10.13039\/501100000780","name":"European Commission","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100000780","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001871","name":"Funda\u00e7\u00e3o para a Ci\u00eancia e Tecnologia","doi-asserted-by":"publisher","award":["SFRH\/BPD\/77487\/2011"],"award-info":[{"award-number":["SFRH\/BPD\/77487\/2011"]}],"id":[{"id":"10.13039\/501100001871","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003500","name":"University of Padova","doi-asserted-by":"crossref","award":["CPDA148387\/14"],"award-info":[{"award-number":["CPDA148387\/14"]}],"id":[{"id":"10.13039\/501100003500","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,1,18]]},"DOI":"10.1093\/biolinnean\/bly185","type":"journal-article","created":{"date-parts":[[2018,10,31]],"date-time":"2018-10-31T16:15:59Z","timestamp":1541002559000},"page":"289-303","source":"Crossref","is-referenced-by-count":23,"title":["Population genomics and phylogeography of a benthic coastal shark (\n                    <i>Scyliorhinus canicula<\/i>\n                    ) using 2b-RAD single nucleotide polymorphisms"],"prefix":"10.1093","volume":"126","author":[{"given":"Alice","family":"Manuzzi","sequence":"first","affiliation":[{"name":"CIBIO \u2013 U.P. \u2013 Research Center for Biodiversity and Genetic Resources, Vair\u00e3o, Portugal"},{"name":"National Institute of Aquatic Resources, Technical University of Denmark, Vejls\u00f8vej, Silkeborg, Denmark"}]},{"given":"Lorenzo","family":"Zane","sequence":"additional","affiliation":[{"name":"Department of Biology, University of Padova, Padova, Italy"},{"name":"Consorzio Nazionale Interuniversitario per le Scienze del Mare (CoNISMa), Roma, Italy"}]},{"given":"Antonio","family":"Mu\u00f1oz-Merida","sequence":"additional","affiliation":[{"name":"CIBIO \u2013 U.P. \u2013 Research Center for Biodiversity and Genetic Resources, Vair\u00e3o, Portugal"}]},{"given":"Andrew M","family":"Griffiths","sequence":"additional","affiliation":[{"name":"School of Biosciences, University of Exeter, Devon, UK"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3396-9822","authenticated-orcid":false,"given":"Ana","family":"Ver\u00edssimo","sequence":"additional","affiliation":[{"name":"CIBIO \u2013 U.P. \u2013 Research Center for Biodiversity and Genetic Resources, Vair\u00e3o, Portugal"},{"name":"Virginia Institute of Marine Science, College of William and Mary, VA, USA"}]}],"member":"286","published-online":{"date-parts":[[2018,12,13]]},"reference":[{"key":"key\n\t\t\t\t2019012510452763500_CIT0001","doi-asserted-by":"crossref","first-page":"1342","DOI":"10.1111\/mec.14549","article-title":"The search for loci under selection: trends, biases and progress","volume":"27","author":"Ahrens","year":"2018","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0002","doi-asserted-by":"crossref","first-page":"270","DOI":"10.1038\/hdy.2010.71","article-title":"Detecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci","volume":"106","author":"Andr\u00e9","year":"2011","journal-title":"Heredity"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0003","doi-asserted-by":"crossref","first-page":"81","DOI":"10.1038\/nrg.2015.28","article-title":"Harnessing the power of RADseq for ecological and evolutionary genomics","volume":"17","author":"Andrews","year":"2016","journal-title":"Nature Reviews Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0004","doi-asserted-by":"crossref","first-page":"5943","DOI":"10.1111\/mec.12964","article-title":"Trade-offs and utility of alternative RADseq methods: reply to Puritz et al","volume":"23","author":"Andrews","year":"2014","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0005","doi-asserted-by":"crossref","first-page":"5","DOI":"10.1111\/1755-0998.12559","article-title":"stratag: an r package for manipulating, summarizing and analysing population genetic data","volume":"17","author":"Archer","year":"2017","journal-title":"Molecular Ecology Resources"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0006","doi-asserted-by":"crossref","first-page":"2797","DOI":"10.1111\/mec.12772","article-title":"Climate-driven range shifts explain the distribution of extant gene pools and predict future loss of unique lineages in a marine brown alga","volume":"23","author":"Assis","year":"2014","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0007","doi-asserted-by":"crossref","first-page":"e3376","DOI":"10.1371\/journal.pone.0003376","article-title":"Rapid SNP discovery and genetic mapping using sequenced RAD markers","volume":"3","author":"Baird","year":"2008","journal-title":"PLoS ONE"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0008","doi-asserted-by":"crossref","first-page":"11","DOI":"10.1016\/j.fishres.2014.01.021","article-title":"Molecular contribution to stock identification in the small-spotted catshark, Scyliorhinus canicula (Chondrichthyes, Scyliorhinidae)","volume":"154","author":"Barbieri","year":"2014","journal-title":"Fisheries Research"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0009","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1111\/j.2517-6161.1995.tb02031.x","article-title":"Controlling the false discovery rate: a practical and powerful approach to multiple testing","volume":"57","author":"Benjamini","year":"1995","journal-title":"Journal of the Royal Statistical Society. Series B (Methodological)"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0013","volume-title":"Variability in life history and population structure in a model shark species, Scyliorhinus canicula (Linnaeus 1758)","author":"Cardoso","year":"2015"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0014","doi-asserted-by":"crossref","first-page":"1699","DOI":"10.1016\/j.icesjms.2005.06.001","article-title":"Population structure of Merluccius merluccius along the Iberian Peninsula coast","volume":"62","author":"Castillo","year":"2005","journal-title":"ICES Journal of Marine Science"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0015","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1111\/j.1558-5646.1967.tb03411.x","article-title":"Phylogenetic analysis: models and estimation procedures","volume":"21","author":"Cavalli-Sforza","year":"1967","journal-title":"Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0016","doi-asserted-by":"crossref","first-page":"540","DOI":"10.1111\/1755-0998.12471","article-title":"TESS3: fast inference of spatial population structure and genome scans for selection","volume":"16","author":"Caye","year":"2016","journal-title":"Molecular Ecology Resources"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0017","doi-asserted-by":"crossref","first-page":"3693","DOI":"10.1111\/j.1365-294X.2006.03043.x","article-title":"Phylogeography and population structure of thornback rays (Raja clavata L., Rajidae)","volume":"15","author":"Chevolot","year":"2006","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0018","doi-asserted-by":"crossref","first-page":"e49196","DOI":"10.1371\/journal.pone.0049196","article-title":"Ancient divergence in the trans-oceanic deep-sea shark Centroscymnus crepidater","volume":"7","author":"Cunha","year":"2012","journal-title":"PLoS ONE"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0019","doi-asserted-by":"crossref","first-page":"2156","DOI":"10.1093\/bioinformatics\/btr330","article-title":"The variant call format and VCFtools","volume":"27","author":"Danecek","year":"2011","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0020","doi-asserted-by":"crossref","first-page":"675","DOI":"10.1093\/icesjms\/fsx160","article-title":"Seascape genetics of a flatfish reveals local selection under high levels of gene flow","volume":"75","author":"Diopere","year":"2018","journal-title":"ICES Journal of Marine Science"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0021","doi-asserted-by":"crossref","first-page":"501","DOI":"10.1007\/s10592-017-1038-3","article-title":"The importance of considering genetic diversity in shark and ray conservation policies","volume":"19","author":"Domingues","year":"2018","journal-title":"Conservation Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0022","doi-asserted-by":"crossref","first-page":"1789","DOI":"10.1111\/j.1095-8649.2012.03265.x","article-title":"A review of the application of molecular genetics for fisheries management and conservation of sharks and rays","volume":"80","author":"Dudgeon","year":"2012","journal-title":"Journal of Fish Biology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0023","doi-asserted-by":"crossref","first-page":"1963","DOI":"10.1093\/molbev\/msp106","article-title":"Spatial inference of admixture proportions and secondary contact zones","volume":"26","author":"Durand","year":"2009","journal-title":"Molecular Biology and Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0024","volume-title":"Sharks of the world: a fully illustrated guide.","author":"Ebert","year":"2013"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0025","doi-asserted-by":"crossref","first-page":"873","DOI":"10.2307\/2528824","article-title":"Distances between populations on the basis of gene frequencies","volume":"27","author":"Edwards","year":"1971","journal-title":"Biometrics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0026","first-page":"361","article-title":"The reproductive biology of Scyliorhinus canicula in the Bristol Channel, U.K","volume":"51","author":"Ellis","year":"1997","journal-title":"Journal of Fish Biology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0027","doi-asserted-by":"crossref","first-page":"160651","DOI":"10.1098\/rsos.160651","article-title":"Next Gen Pop Gen: implementing a high-throughput approach to population genetics in boarfish (Capros aper)","volume":"3","author":"Farrell","year":"2016","journal-title":"Royal Society Open Science"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0028","doi-asserted-by":"crossref","first-page":"110","DOI":"10.1111\/mec.12583","article-title":"Two decades of genetic profiling yields first evidence of natal philopatry and long-term fidelity to parturition sites in sharks","volume":"23","author":"Feldheim","year":"2014","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0029","doi-asserted-by":"crossref","first-page":"1497","DOI":"10.1098\/rspb.2009.2111","article-title":"Molecular markers reveal spatially segregated cryptic species in a critically endangered fish, the common skate (Dipturus batis)","volume":"277","author":"Griffiths","year":"2010","journal-title":"Proceedings of the Royal Society B: Biological Sciences"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0030","doi-asserted-by":"crossref","first-page":"577","DOI":"10.1007\/s10592-010-0127-3","article-title":"Levels of connectivity between longnose skate (Dipturus oxyrinchus) in the Mediterranean Sea and the north-eastern Atlantic Ocean","volume":"12","author":"Griffiths","year":"2011","journal-title":"Conservation Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0031","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1016\/j.dsr.2016.07.002","article-title":"Connectivity in the deep: phylogeography of the velvet belly lanternshark","volume":"115","author":"Gubili","year":"2016","journal-title":"Deep-Sea Research Part I: Oceanographic Research Papers"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0032","doi-asserted-by":"crossref","first-page":"140175","DOI":"10.1098\/rsos.140175","article-title":"A tale of two seas: contrasting patterns of population structure in the small-spotted catshark across Europe","volume":"1","author":"Gubili","year":"2014","journal-title":"Royal Society Open Science"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0034","doi-asserted-by":"crossref","first-page":"e1000695","DOI":"10.1371\/journal.pgen.1000695","article-title":"Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data","volume":"5","author":"Gutenkunst","year":"2009","journal-title":"PLoS Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0035","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1046\/j.1365-294X.2003.02087.x","article-title":"Phylogeography of the common goby, Pomatoschistus microps, with particular emphasis on the colonization of the Mediterranean and the North Sea","volume":"13","author":"Gysels","year":"2004","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0036","doi-asserted-by":"crossref","first-page":"3104","DOI":"10.1111\/j.1365-294X.2007.03367.x","article-title":"Evolutionary mechanisms shaping the genetic population structure of marine fishes; lessons from the European flounder (Platichthys flesus L.)","volume":"16","author":"Hemmer-Hansen","year":"2007","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0037","doi-asserted-by":"crossref","first-page":"117","DOI":"10.1086\/BBLv227n2p117","article-title":"Population genomics of marine fishes: next-generation prospects and challenges","volume":"227","author":"Hemmer-Hansen","year":"2014","journal-title":"The Biological Bulletin"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0038","doi-asserted-by":"crossref","first-page":"907","DOI":"10.1038\/35016000","article-title":"The genetic legacy of the Quaternary ice ages","volume":"405","author":"Hewitt","year":"2000","journal-title":"Nature"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0039","doi-asserted-by":"crossref","first-page":"3606","DOI":"10.1111\/j.1365-294X.2007.03408.x","article-title":"Glacial refugia and recolonization pathways in the brown seaweed Fucus serratus","volume":"16","author":"Hoarau","year":"2007","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0040","first-page":"711","volume-title":"Report of the Working Group on Elasmobranch Fishes (WGEF), 17\u201323 June 2015, Lisbon, Portugal. ICES CM 2015\/ACOM:19.","author":"ICES","year":"2015"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0041","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1038\/sj.hdy.6800543","article-title":"Sharp genetic break between Atlantic and English Channel populations of the polychaete Pectinaria koreni, along the North coast of France","volume":"94","author":"Jolly","year":"2005","journal-title":"Heredity"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0042","doi-asserted-by":"crossref","first-page":"1841","DOI":"10.1111\/j.1365-294X.2006.02910.x","article-title":"Comparative phylogeography of two coastal polychaete tubeworms in the Northeast Atlantic supports shared history and vicariant events","volume":"15","author":"Jolly","year":"2006","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0043","doi-asserted-by":"crossref","first-page":"3070","DOI":"10.1093\/bioinformatics\/btr521","article-title":"adegenet 1.3-1: new tools for the analysis of genome-wide SNP data","volume":"27","author":"Jombart","year":"2011","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0044","doi-asserted-by":"crossref","first-page":"4015","DOI":"10.1111\/j.1365-294X.2008.03887.x","article-title":"GST and its relatives do not measure differentiation","volume":"17","author":"Jost","year":"2008","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0045","doi-asserted-by":"crossref","first-page":"208","DOI":"10.3389\/fgene.2015.00208","article-title":"Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality","volume":"6","author":"Kamvar","year":"2015","journal-title":"Frontiers in Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0046","doi-asserted-by":"crossref","first-page":"e281","DOI":"10.7717\/peerj.281","article-title":"Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and\/or sexual reproduction","volume":"2","author":"Kamvar","year":"2014","journal-title":"PeerJ"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0047","doi-asserted-by":"crossref","first-page":"782","DOI":"10.1111\/2041-210X.12067","article-title":"DiveRsity: an R package for the estimation and exploration of population genetics parameters and their associated errors","volume":"4","author":"Keenan","year":"2013","journal-title":"Methods in Ecology and Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0048","doi-asserted-by":"crossref","first-page":"333","DOI":"10.1038\/hdy.2014.107","article-title":"Strong population genetic structure and contrasting demographic histories for the small-spotted catshark (Scyliorhinus canicula) in the Mediterranean Sea","volume":"114","author":"Kousteni","year":"2015","journal-title":"Heredity"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0049","doi-asserted-by":"crossref","first-page":"221","DOI":"10.1007\/s00227-011-1802-8","article-title":"The cockle Cerastoderma edule at Northeast Atlantic shores: genetic signatures of glacial refugia","volume":"159","author":"Krakau","year":"2012","journal-title":"Marine Biology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0050","doi-asserted-by":"crossref","first-page":"1138","DOI":"10.1111\/j.1365-2699.2008.02072.x","article-title":"Distributional and demographic consequences of Pleistocene climate fluctuations for a marine demersal fish in the north-eastern Atlantic","volume":"36","author":"Larmuseau","year":"2009","journal-title":"Journal of Biogeography"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0051","doi-asserted-by":"crossref","first-page":"3187","DOI":"10.1111\/mec.13627","article-title":"Parallel genetic divergence among coastal\u2013marine ecotype pairs of European anchovy explained by differential introgression after secondary contact","volume":"25","author":"Le Moan","year":"2016","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0051a","first-page":"81","article-title":"Sexual dimorphism as an index of the isolation of West African populations of the cat shark Scyliorhinus canicula","volume":"43","author":"Litvinov","year":"2003","journal-title":"Journal of Ichthyology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0052","doi-asserted-by":"crossref","first-page":"981","DOI":"10.1038\/nrg1226","article-title":"The power and promise of population genomics: from genotyping to genome typing","volume":"4","author":"Luikart","year":"2003","journal-title":"Nature Reviews Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0053","doi-asserted-by":"crossref","first-page":"1889","DOI":"10.1046\/j.1365-294x.1999.00789.x","article-title":"Macrogeographical population differentiation in oceanic environments: a case study of European hake (Merluccius merluccius), a commercially important fish","volume":"8","author":"Lundy","year":"1999","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0054","doi-asserted-by":"crossref","first-page":"S108","DOI":"10.1890\/08-0257.1","article-title":"Evaluating signatures of glacial refugia for North Atlantic marine organisms","volume":"89","author":"Maggs","year":"2008","journal-title":"Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0055","doi-asserted-by":"crossref","first-page":"118","DOI":"10.1111\/mec.12568","article-title":"Outlier SNP markers reveal fine-scale genetic structuring across European hake populations (Merluccius merluccius)","volume":"23","author":"Milano","year":"2014","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0056","doi-asserted-by":"crossref","first-page":"240","DOI":"10.1101\/gr.5681207","article-title":"Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers","volume":"17","author":"Miller","year":"2007","journal-title":"Genome Research"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0057","doi-asserted-by":"crossref","first-page":"142","DOI":"10.1038\/hdy.2017.21","article-title":"Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos)","volume":"119","author":"Momigliano","year":"2017","journal-title":"Heredity"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0058","doi-asserted-by":"crossref","first-page":"208","DOI":"10.1016\/j.tree.2004.01.009","article-title":"SNPs in ecology, evolution and conservation","volume":"19","author":"Morin","year":"2004","journal-title":"Trends in Ecology & Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0059","doi-asserted-by":"crossref","first-page":"851","DOI":"10.1038\/ncomms1845","article-title":"Gene-associated markers provide tools for tackling illegal fishing and false eco-certification","volume":"3","author":"Nielsen","year":"2012","journal-title":"Nature Communications"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0060","doi-asserted-by":"crossref","first-page":"3128","DOI":"10.1111\/j.1365-294X.2009.04272.x","article-title":"Population genomics of marine fishes: identifying adaptive variation in space and time","volume":"18","author":"Nielsen","year":"2009","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0061","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1093\/bioinformatics\/btg412","article-title":"APE: analyses of phylogenetics and evolution in R language","volume":"20","author":"Paradis","year":"2004","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0063","doi-asserted-by":"crossref","first-page":"2463","DOI":"10.1002\/ece3.2844","article-title":"Population genomics meet Lagrangian simulations: oceanographic patterns and long larval duration ensure connectivity among Paracentrotus lividus populations in the Adriatic and Ionian seas","volume":"7","author":"Paterno","year":"2017","journal-title":"Ecology and Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0064","doi-asserted-by":"crossref","first-page":"1151","DOI":"10.1007\/s10592-017-0967-1","article-title":"Genome-wide SNPs reveal low effective population size within confined management units of the highly vagile Galapagos shark (Carcharhinus galapagensis)","volume":"18","author":"Pazmi\u00f1o","year":"2017","journal-title":"Conservation Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0065","doi-asserted-by":"crossref","first-page":"1536","DOI":"10.1093\/bioinformatics\/bts184","article-title":"Ape 3.0: new tools for distance-based phylogenetics and evolutionary analysis in R","volume":"28","author":"Popescu","year":"2012","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0066","doi-asserted-by":"crossref","first-page":"1120","DOI":"10.1111\/j.1095-8649.2011.03206.x","article-title":"Molecular markers: progress and prospects for understanding reproductive ecology in elasmobranchs","volume":"80","author":"Portnoy","year":"2012","journal-title":"Journal of Fish Biology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0067","doi-asserted-by":"crossref","first-page":"5877","DOI":"10.1111\/mec.13441","article-title":"Selection and sex-biased dispersal in a coastal shark: the influence of philopatry on adaptive variation","volume":"24","author":"Portnoy","year":"2015","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0068","doi-asserted-by":"crossref","first-page":"945","DOI":"10.1093\/genetics\/155.2.945","article-title":"Inference of population structure using multilocus genotype data","volume":"155","author":"Pritchard","year":"2000","journal-title":"Genetics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0069","doi-asserted-by":"crossref","first-page":"e431","DOI":"10.7717\/peerj.431","article-title":"dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms","volume":"2","author":"Puritz","year":"2014","journal-title":"PeerJ"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0070","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1007\/s00227-017-3254-2","article-title":"Contrasting evolutionary patterns in populations of demersal sharks throughout the western Mediterranean","volume":"165","author":"Ram\u00edrez-Amaro","year":"2018","journal-title":"Marine Biology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0071","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1016\/j.fishres.2004.04.002","article-title":"Is the lesser spotted dogfish (Scyliorhinus canicula) population from the Cantabrian Sea a unique stock","volume":"69","author":"Rodr\u00edguez-Cabello","year":"2004","journal-title":"Fisheries Research"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0072","doi-asserted-by":"crossref","first-page":"187","DOI":"10.3989\/scimar.1998.62n3187","article-title":"Reproductive biology of lesser spotted dogfish Scyliorhinus canicula (L., 1758) in the Cantabrian Sea","volume":"62","author":"Rodr\u00edguez-Cabello","year":"1998","journal-title":"Scientia Marina (Barcelona)"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0073","doi-asserted-by":"crossref","first-page":"863","DOI":"10.1093\/bioinformatics\/btr026","article-title":"Quality control and preprocessing of metagenomic datasets","volume":"27","author":"Schmieder","year":"2011","journal-title":"Bioinformatics"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0074","doi-asserted-by":"crossref","first-page":"1165","DOI":"10.1007\/s002270100666","article-title":"Movements and activity of male and female dogfish in a tidal sea lough: alternative behavioural strategies and apparent sexual segregation","volume":"139","author":"Sims","year":"2001","journal-title":"Marine Biology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0075","doi-asserted-by":"crossref","first-page":"247","DOI":"10.1016\/S0165-7836(99)00076-4","article-title":"Stock complexity in fisheries management: a perspective of emerging issues related to population sub-units","volume":"43","author":"Stephenson","year":"1999","journal-title":"Fisheries Research"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0076","doi-asserted-by":"crossref","first-page":"3461","DOI":"10.1002\/ece3.2096","article-title":"Directional genetic differentiation and relative migration","volume":"6","author":"Sundqvist","year":"2016","journal-title":"Ecology and Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0077","doi-asserted-by":"crossref","first-page":"5570","DOI":"10.1038\/ncomms6770","article-title":"European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation","volume":"5","author":"Tine","year":"2014","journal-title":"Nature Communications"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0078","doi-asserted-by":"crossref","first-page":"618","DOI":"10.1111\/mec.12628","article-title":"Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus)","volume":"23","author":"Vandamme","year":"2014","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0079","doi-asserted-by":"crossref","first-page":"1651","DOI":"10.1111\/j.1365-294X.2010.04598.x","article-title":"Global population structure of the spiny dogfish Squalus acanthias, a temperate shark with an antitropical distribution","volume":"19","author":"Ver\u00edssimo","year":"2010","journal-title":"Molecular Ecology"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0080","doi-asserted-by":"crossref","first-page":"555","DOI":"10.1093\/icesjms\/fsr003","article-title":"Population structure of a deep-water squaloid shark, the Portuguese dogfish (Centroscymnus coelolepis)","volume":"68","author":"Ver\u00edssimo","year":"2011","journal-title":"ICES Journal of Marine Science"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0081","doi-asserted-by":"crossref","first-page":"505","DOI":"10.1071\/MF11237","article-title":"Genetic population structure and connectivity in a commercially exploited and wide-ranging deepwater shark, the leafscale gulper (Centrophorus squamosus)","volume":"63","author":"Ver\u00edssimo","year":"2012","journal-title":"Marine and Freshwater Research"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0082","doi-asserted-by":"crossref","first-page":"808","DOI":"10.1038\/nmeth.2023","article-title":"2b-RAD: a simple and flexible method for genome-wide genotyping","volume":"9","author":"Wang","year":"2012","journal-title":"Nature Methods"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0083","first-page":"1358","article-title":"Estimating F-statistics for the analysis of population structure","volume":"38","author":"Weir","year":"1984","journal-title":"Evolution"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0084","doi-asserted-by":"crossref","first-page":"e42649","DOI":"10.1371\/journal.pone.0042649","article-title":"Estimates of genetic differentiation measured by FST do not necessarily require large sample sizes when using many SNP markers","volume":"7","author":"Willing","year":"2012","journal-title":"PLoS ONE"},{"key":"key\n\t\t\t\t2019012510452763500_CIT0085","doi-asserted-by":"crossref","first-page":"191","DOI":"10.12688\/f1000research.4996.1","article-title":"SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes","volume":"3","author":"Wyffels","year":"2014","journal-title":"F1000Research"}],"container-title":["Biological Journal of the Linnean Society"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/biolinnean\/article-pdf\/126\/2\/289\/27513323\/bly185.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,4,3]],"date-time":"2026-04-03T22:44:29Z","timestamp":1775256269000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/biolinnean\/article\/126\/2\/289\/5244343"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,12,13]]},"references-count":81,"journal-issue":{"issue":"2","published-online":{"date-parts":[[2018,12,13]]},"published-print":{"date-parts":[[2019,1,18]]}},"URL":"https:\/\/doi.org\/10.1093\/biolinnean\/bly185","relation":{},"ISSN":["0024-4066","1095-8312"],"issn-type":[{"value":"0024-4066","type":"print"},{"value":"1095-8312","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2019,2]]},"published":{"date-parts":[[2018,12,13]]}}}