{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,13]],"date-time":"2026-04-13T15:00:00Z","timestamp":1776092400582,"version":"3.50.1"},"reference-count":97,"publisher":"Oxford University Press (OUP)","issue":"4","license":[{"start":{"date-parts":[[2019,3,19]],"date-time":"2019-03-19T00:00:00Z","timestamp":1552953600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"funder":[{"name":"Science and Technology Foundation","award":["SFRH\/BD\/98122\/2013"],"award-info":[{"award-number":["SFRH\/BD\/98122\/2013"]}]},{"name":"BioISI project","award":["UID\/Multi\/04046\/2019"],"award-info":[{"award-number":["UID\/Multi\/04046\/2019"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,4,1]]},"DOI":"10.1093\/gbe\/evz061","type":"journal-article","created":{"date-parts":[[2019,3,18]],"date-time":"2019-03-18T12:35:32Z","timestamp":1552912532000},"page":"1152-1165","source":"Crossref","is-referenced-by-count":30,"title":["Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae"],"prefix":"10.1093","volume":"11","author":[{"given":"Ana","family":"Escudeiro","sequence":"first","affiliation":[{"name":"Department of Genetics and Biotechnology, CAG \u2013 Laboratory of Cytogenomics and Animal Genomics, University of Tr\u00e1s-os-Montes e Alto Douro, Vila Real, Portugal"},{"name":"BioISI \u2013 Biosystems & Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, Portugal"}]},{"given":"Filomena","family":"Adega","sequence":"additional","affiliation":[{"name":"Department of Genetics and Biotechnology, CAG \u2013 Laboratory of Cytogenomics and Animal Genomics, University of Tr\u00e1s-os-Montes e Alto Douro, Vila Real, Portugal"},{"name":"BioISI \u2013 Biosystems & Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, Portugal"}]},{"given":"Terence J","family":"Robinson","sequence":"additional","affiliation":[{"name":"Department of Botany and Zoology, Stellenbosch University, South Africa"}]},{"given":"John S","family":"Heslop-Harrison","sequence":"additional","affiliation":[{"name":"Department of Genetics and Genome Biology, University of Leicester, United Kingdom"}]},{"given":"Raquel","family":"Chaves","sequence":"additional","affiliation":[{"name":"Department of Genetics and Biotechnology, CAG \u2013 Laboratory of Cytogenomics and Animal Genomics, University of Tr\u00e1s-os-Montes e Alto Douro, Vila Real, Portugal"},{"name":"BioISI \u2013 Biosystems & Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, Portugal"}]}],"member":"286","published-online":{"date-parts":[[2019,3,19]]},"reference":[{"issue":"2","key":"2019042010125990200_evz061-B1","doi-asserted-by":"crossref","first-page":"140","DOI":"10.1159\/000093330","article-title":"Physical organization of the 1.709 satellite IV DNA family in Bovini and Tragelaphini tribes of the Bovidae: sequence and chromosomal evolution","volume":"114","author":"Adega","year":"2006","journal-title":"Cytogenet Genome Res"},{"issue":"1-2","key":"2019042010125990200_evz061-B2","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1159\/000245903","article-title":"Satellite DNA in the karyotype evolution of domestic animals\u2013clinical considerations","volume":"126","author":"Adega","year":"2009","journal-title":"Cytogenet Genome Res"},{"issue":"10","key":"2019042010125990200_evz061-B3","doi-asserted-by":"crossref","first-page":"1301","DOI":"10.1101\/gr.206706.116","article-title":"Genomic variation within alpha satellite DNA influences centromere location on human chromosomes with metastable epialleles","volume":"26","author":"Aldrup-MacDonald","year":"2016","journal-title":"Genome Res"},{"issue":"1","key":"2019042010125990200_evz061-B4","doi-asserted-by":"crossref","first-page":"33","DOI":"10.3390\/genes5010033","article-title":"The past, present, and future of human centromere genomics","volume":"5","author":"Aldrup-Macdonald","year":"2014","journal-title":"Genes"},{"issue":"6","key":"2019042010125990200_evz061-B5","doi-asserted-by":"crossref","first-page":"684.","DOI":"10.1038\/ncb3344","article-title":"Centromeric DNA replication reconstitution reveals DNA loops and ATR checkpoint suppression","volume":"18","author":"Aze","year":"2016","journal-title":"Nat Cell Biol"},{"issue":"3","key":"2019042010125990200_evz061-B6","doi-asserted-by":"crossref","first-page":"463","DOI":"10.1007\/s10577-015-9494-4","article-title":"Transcription of tandemly repetitive DNA: functional roles","volume":"23","author":"Biscotti","year":"2015","journal-title":"Chromosome Res"},{"issue":"3","key":"2019042010125990200_evz061-B7","doi-asserted-by":"crossref","first-page":"415","DOI":"10.1007\/s10577-015-9499-z","article-title":"Repetitive DNA in eukaryotic genomes","volume":"23","author":"Biscotti","year":"2015","journal-title":"Chromosome Res"},{"issue":"6","key":"2019042010125990200_evz061-B8","doi-asserted-by":"crossref","first-page":"907","DOI":"10.1007\/s10577-008-1248-0","article-title":"Molecular and cytogenetic characterization of repetitive DNA in the Antarctic polyplacophoran Nuttallochiton mirandus","volume":"16","author":"Biscotti","year":"2008","journal-title":"Chromosome Res"},{"issue":"8","key":"2019042010125990200_evz061-B9","doi-asserted-by":"crossref","first-page":"1812","DOI":"10.1002\/j.1460-2075.1995.tb07169.x","article-title":"Sequence\u2010dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides","volume":"14","author":"Brukner","year":"1995","journal-title":"EMBO J"},{"issue":"1","key":"2019042010125990200_evz061-B10","doi-asserted-by":"crossref","first-page":"113","DOI":"10.1007\/s00412-008-0181-5","article-title":"A new class of retroviral and satellite encoded small RNAs emanates from mammalian centromeres","volume":"118","author":"Carone","year":"2009","journal-title":"Chromosoma"},{"key":"2019042010125990200_evz061-B11","doi-asserted-by":"crossref","first-page":"35.","DOI":"10.1186\/s13039-016-0242-z","article-title":"The major horse satellite DNA family is associated with centromere competence","volume":"9","author":"Cerutti","year":"2016","journal-title":"Mol Cytogenet"},{"issue":"6494","key":"2019042010125990200_evz061-B12","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1038\/371215a0","article-title":"The evolutionary dynamics of repetitive DNA in eukaryotes","volume":"371","author":"Charlesworth","year":"1994","journal-title":"Nature"},{"issue":"7","key":"2019042010125990200_evz061-B13","doi-asserted-by":"crossref","first-page":"641","DOI":"10.1023\/A:1025952507959","article-title":"Complex satellite DNA reshuffling in the polymorphic t (1; 29) Robertsonian translocation and evolutionarily derived chromosomes in cattle","volume":"11","author":"Chaves","year":"2003","journal-title":"Chromosome Res"},{"issue":"11","key":"2019042010125990200_evz061-B14","doi-asserted-by":"crossref","first-page":"3073","DOI":"10.1093\/gbe\/evx212","article-title":"FA-SAT is an old satellite DNA frozen in several Bilateria genomes","volume":"9","author":"Chaves","year":"2017","journal-title":"Genome Biol Evol"},{"issue":"1-4","key":"2019042010125990200_evz061-B15","doi-asserted-by":"crossref","first-page":"62","DOI":"10.1159\/000056820","article-title":"The species and chromosomal distribution of the centromeric \u03b1-satellite I sequence from sheep in the tribe Caprini and other Bovidae","volume":"91","author":"Chaves","year":"2000","journal-title":"Cytogenet Genome Res"},{"issue":"1576","key":"2019042010125990200_evz061-B16","doi-asserted-by":"crossref","first-page":"2009","DOI":"10.1098\/rspb.2005.3206","article-title":"Phylogenetic relationships and the primitive X chromosome inferred from chromosomal and satellite DNA analysis in Bovidae","volume":"272","author":"Chaves","year":"2005","journal-title":"Proc R Soc Lond B Biol Sci"},{"issue":"3","key":"2019042010125990200_evz061-B17","doi-asserted-by":"crossref","first-page":"315","DOI":"10.1023\/B:GENE.0000039859.33467.46","article-title":"Comparative analysis (Hippotragini versus Caprini, Bovidae) of X-chromosome\u2019s constitutive heterochromatin by in situ restriction endonuclease digestion: X-chromosome constitutive heterochromatin evolution","volume":"121","author":"Chaves","year":"2004","journal-title":"Genetica"},{"issue":"6","key":"2019042010125990200_evz061-B18","doi-asserted-by":"crossref","first-page":"649","DOI":"10.1007\/s10577-006-1074-1","article-title":"Cattle rob (1; 29) originating from complex chromosome rearrangements as revealed by both banding and FISH-mapping techniques","volume":"14","author":"Di Meo","year":"2006","journal-title":"Chromosome Res"},{"key":"2019042010125990200_evz061-B19","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1007\/978-3-319-58592-5_13","volume-title":"Centromeres and kinetochores","author":"Dumont","year":"2017"},{"key":"2019042010125990200_evz061-B20","doi-asserted-by":"crossref","first-page":"31","DOI":"10.1016\/B978-0-12-410523-2.00002-X","article-title":"Mammalian satellite DNA: a speaking dumb","volume":"90","author":"Enukashvily","year":"2013","journal-title":"Adv Protein Chem Struct Biol"},{"issue":"1","key":"2019042010125990200_evz061-B21","doi-asserted-by":"crossref","first-page":"20","DOI":"10.1080\/24750263.2018.1558294","article-title":"Bovine satellite DNAs\u2014a history of the evolution of complexity and its impact in the Bovidae family","volume":"86","author":"Escudeiro","year":"2019","journal-title":"Euro Zool J"},{"issue":"8","key":"2019042010125990200_evz061-B22","doi-asserted-by":"crossref","first-page":"e1005466.","DOI":"10.1371\/journal.pgen.1005466","article-title":"Satellite DNA modulates gene expression in the beetle Tribolium castaneum after heat stress","volume":"11","author":"Feliciello","year":"2015","journal-title":"PLoS Genet"},{"issue":"3","key":"2019042010125990200_evz061-B23","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1007\/s10577-015-9482-8","article-title":"Satellite non-coding RNAs: the emerging players in cells, cellular pathways and cancer","volume":"23","author":"Ferreira","year":"2015","journal-title":"Chromosome Res"},{"issue":"4","key":"2019042010125990200_evz061-B24","doi-asserted-by":"crossref","first-page":"1069","DOI":"10.1016\/0092-8674(77)90170-2","article-title":"Nucleotide sequences of HS-\u03b1 satellite DNA from kangaroo rat Dipodomys ordii and characterization of similar sequences in other rodents","volume":"12","author":"Fry","year":"1977","journal-title":"Cell"},{"issue":"1","key":"2019042010125990200_evz061-B25","doi-asserted-by":"crossref","first-page":"124","DOI":"10.1016\/0014-5793(96)00837-X","article-title":"Distribution of bending propensity in DNA sequences","volume":"393","author":"Gabrielian","year":"1996","journal-title":"FEBS Lett"},{"issue":"4","key":"2019042010125990200_evz061-B26","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1093\/oxfordjournals.jhered.a111215","article-title":"Chromosome conservation in the Bovidae","volume":"83","author":"Gallagher","year":"1992","journal-title":"J Hered"},{"issue":"2","key":"2019042010125990200_evz061-B27","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1159\/000437008","article-title":"Satellite DNA in plants: more than just rubbish","volume":"146","author":"Garrido-Ramos","year":"2015","journal-title":"Cytogenet Genome Res"},{"key":"2019042010125990200_evz061-B28","doi-asserted-by":"crossref","first-page":"443","DOI":"10.1146\/annurev-genet-110711-155419","article-title":"RNA as a structural and regulatory component of the centromere","volume":"46","author":"Gent","year":"2012","journal-title":"Annu Rev Genet"},{"key":"2019042010125990200_evz061-B29","author":"Giannuzzi","year":"2012"},{"key":"2019042010125990200_evz061-B30","doi-asserted-by":"crossref","DOI":"10.56021\/9781421400938","volume-title":"Ungulate taxonomy","author":"Groves","year":"2011"},{"issue":"5","key":"2019042010125990200_evz061-B31","doi-asserted-by":"crossref","first-page":"535","DOI":"10.1007\/s10577-012-9297-9","article-title":"Pericentric and centromeric transcription: a perfect balance required","volume":"20","author":"Hall","year":"2012","journal-title":"Chromosome Res"},{"issue":"2","key":"2019042010125990200_evz061-B32","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1006\/mpev.1999.0619","article-title":"The tribal radiation of the family Bovidae (Artiodactyla) and the evolution of the mitochondrial cytochrome b gene","volume":"13","author":"Hassanin","year":"1999","journal-title":"Mol Phylogenet Evol"},{"key":"2019042010125990200_evz061-B33","doi-asserted-by":"crossref","first-page":"324.","DOI":"10.1186\/1471-2164-13-324","article-title":"Composition and organization of active centromere sequences in complex genomes","volume":"13","author":"Hayden","year":"2012","journal-title":"BMC Genomics"},{"issue":"1","key":"2019042010125990200_evz061-B34","doi-asserted-by":"crossref","first-page":"e1400234.","DOI":"10.1126\/sciadv.1400234","article-title":"A unique chromatin complex occupies young \u03b1-satellite arrays of human centromeres","volume":"1","author":"Henikoff","year":"2015","journal-title":"Sci Adv"},{"issue":"1","key":"2019042010125990200_evz061-B35","doi-asserted-by":"crossref","first-page":"18","DOI":"10.1111\/j.1365-313X.2011.04544.x","article-title":"Organisation of the plant genome in chromosomes","volume":"66","author":"Heslop-Harrison","year":"2011","journal-title":"Plant J"},{"issue":"50","key":"2019042010125990200_evz061-B36","doi-asserted-by":"crossref","first-page":"19974","DOI":"10.1073\/pnas.1319945110","article-title":"Nucleosomes and centromeric DNA packaging","volume":"110","author":"Heslop-Harrison","year":"2013","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"11","key":"2019042010125990200_evz061-B37","doi-asserted-by":"crossref","first-page":"1863","DOI":"10.1101\/gr.116228.110","article-title":"Variety of genomic DNA patterns for nucleosome positioning","volume":"21","author":"Ioshikhes","year":"2011","journal-title":"Genome Res."},{"issue":"3","key":"2019042010125990200_evz061-B38","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1007\/BF01215174","article-title":"Evolution and recombination of bovine DNA repeats","volume":"41","author":"Jobse","year":"1995","journal-title":"J Mol Evol"},{"issue":"7236","key":"2019042010125990200_evz061-B39","doi-asserted-by":"crossref","first-page":"362","DOI":"10.1038\/nature07667","article-title":"The DNA-encoded nucleosome organization of a eukaryotic genome","volume":"458","author":"Kaplan","year":"2009","journal-title":"Nature"},{"key":"2019042010125990200_evz061-B40","doi-asserted-by":"crossref","DOI":"10.1101\/209023","article-title":"Non-B-form DNA structures mark centromeres","author":"Kasinathan","year":"2017"},{"issue":"3","key":"2019042010125990200_evz061-B41","doi-asserted-by":"crossref","first-page":"615","DOI":"10.1007\/s10577-015-9491-7","article-title":"Transposable elements and G-quadruplexes","volume":"23","author":"Kejnovsky","year":"2015","journal-title":"Chromosome Res"},{"key":"2019042010125990200_evz061-B42","first-page":"34","article-title":"A re-evaluation of phylogenetic relationships within the tribe Tragelaphini (Bovinae: Bovidae), based on complete mitochondrial genomes","volume":"33","author":"Khademi","year":"2017","journal-title":"Flora"},{"key":"2019042010125990200_evz061-B43","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1016\/j.gene.2005.03.004","article-title":"Gene splice sites correlate with nucleosome positions","volume":"352","author":"Kogan","year":"2005","journal-title":"Gene"},{"issue":"2","key":"2019042010125990200_evz061-B44","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1007\/s13353-011-0080-y","article-title":"Isolation and comparison of tribe-specific centromeric repeats within Bovidae","volume":"53","author":"Kopecna","year":"2012","journal-title":"J Appl Genet"},{"issue":"3","key":"2019042010125990200_evz061-B45","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1007\/s10577-014-9401-4","article-title":"Tribe-specific satellite DNA in non-domestic Bovidae","volume":"22","author":"Kopecna","year":"2014","journal-title":"Chromosome Res"},{"issue":"1-2","key":"2019042010125990200_evz061-B46","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1159\/000320921","article-title":"Characterization and genomic organization of PERI, a repetitive DNA in the Drosophila buzzatii cluster related to DINE-1 transposable elements and highly abundant in the sex chromosomes","volume":"132","author":"Kuhn","year":"2011","journal-title":"Cytogenet Genome Res"},{"issue":"2","key":"2019042010125990200_evz061-B47","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1007\/s10577-007-1195-1","article-title":"Sequence analysis, chromosomal distribution and long-range organization show that rapid turnover of new and old pBuM satellite DNA repeats leads to different patterns of variation in seven species of the Drosophila buzzatii cluster","volume":"16","author":"Kuhn","year":"2008","journal-title":"Chromosome Res"},{"issue":"1","key":"2019042010125990200_evz061-B48","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1111\/j.1365-2052.1993.tb00916.x","article-title":"Short interspersed nuclear element (SINE) sequences of the Bovidae","volume":"24","author":"Lenstra","year":"1993","journal-title":"Anim Genet"},{"key":"2019042010125990200_evz061-B49","doi-asserted-by":"crossref","first-page":"72.","DOI":"10.1186\/1471-2164-12-72","article-title":"Analysis of nucleosome positioning determined by DNA helix curvature in the human genome","volume":"12","author":"Liu","year":"2011","journal-title":"BMC Genomics"},{"issue":"12","key":"2019042010125990200_evz061-B50","doi-asserted-by":"crossref","first-page":"4597","DOI":"10.1529\/biophysj.107.117028","article-title":"Characteristics of nucleosome core DNA and their applications in predicting nucleosome positions","volume":"94","author":"Liu","year":"2008","journal-title":"Biophys J"},{"key":"2019042010125990200_evz061-B51","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1159\/000337118","article-title":"The repetitive DNA content of eukaryotic genomes","volume":"7","author":"L\u00f3pez-Flores","year":"2012","journal-title":"Genome Dyn"},{"key":"2019042010125990200_evz061-B52","doi-asserted-by":"crossref","first-page":"181","DOI":"10.1016\/j.gene.2004.06.049","article-title":"The molecular phylogeny of oysters based on a satellite DNA related to transposons","volume":"339","author":"L\u00f3pez-Flores","year":"2004","journal-title":"Gene"},{"key":"2019042010125990200_evz061-B53","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1016\/j.ympev.2015.06.008","article-title":"A novel satellite DNA sequence in the Peromyscus genome (PMSat): evolution via copy number fluctuation","volume":"92","author":"Louzada","year":"2015","journal-title":"Mol Phylogenet Evol"},{"issue":"2","key":"2019042010125990200_evz061-B54","doi-asserted-by":"crossref","first-page":"198","DOI":"10.1016\/j.gene.2009.06.014","article-title":"Hypervariable 3\u2032 UTR region of plant LTR-retrotransposons as a source of novel satellite repeats","volume":"448","author":"Macas","year":"2009","journal-title":"Gene"},{"issue":"1","key":"2019042010125990200_evz061-B55","doi-asserted-by":"crossref","first-page":"179","DOI":"10.1111\/j.1432-1033.1978.tb12155.x","article-title":"An analysis of the bovine genome by density\u2010gradient centrifugation","volume":"84","author":"Macaya","year":"1978","journal-title":"Eur J Biochem"},{"key":"2019042010125990200_evz061-B56","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1471-2164-10-177","article-title":"Phylogenetic reconstruction and the identification of ancient polymorphism in the Bovini tribe (Bovidae, Bovinae","volume":"10","author":"MacEachern","year":"2009","journal-title":"BMC Genomics"},{"issue":"1","key":"2019042010125990200_evz061-B57","doi-asserted-by":"crossref","first-page":"16.","DOI":"10.1038\/nrm.2015.5","article-title":"The molecular basis for centromere identity and function","volume":"17","author":"McKinley","year":"2016","journal-title":"Nat Rev Mol Cell Biol"},{"issue":"1","key":"2019042010125990200_evz061-B58","doi-asserted-by":"crossref","first-page":"R10","DOI":"10.1186\/gb-2013-14-1-r10","article-title":"Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution","volume":"14","author":"Melters","year":"2013","journal-title":"Genome Biol"},{"issue":"8","key":"2019042010125990200_evz061-B59","doi-asserted-by":"crossref","first-page":"1062","DOI":"10.1093\/oxfordjournals.molbev.a026005","article-title":"Evolution of satellite DNAs from the genus Palorus\u2014experimental evidence for the \u201clibrary\u201d hypothesis","volume":"15","author":"Mestrovi\u0107","year":"1998","journal-title":"Mol Biol Evol"},{"issue":"2","key":"2019042010125990200_evz061-B60","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1080\/10495399309525793","article-title":"Molecular organization and chromosomal localization of six highly repeated DNA families in the bovine genome","volume":"4","author":"Modi","year":"1993","journal-title":"Anim Biotechnol"},{"issue":"3","key":"2019042010125990200_evz061-B61","doi-asserted-by":"crossref","first-page":"337","DOI":"10.1007\/BF02337544","article-title":"Evolutionary histories of highly repeated DNA families among the Artiodactyla (Mammalia)","volume":"42","author":"Modi","year":"1996","journal-title":"J Mol Evol"},{"issue":"4","key":"2019042010125990200_evz061-B62","doi-asserted-by":"crossref","first-page":"460","DOI":"10.1007\/s00239-003-2567-6","article-title":"Concerted evolution and higher-order repeat structure of the 1.709 (satellite IV) family in bovids","volume":"58","author":"Modi","year":"2004","journal-title":"J Mol Evol"},{"issue":"6","key":"2019042010125990200_evz061-B63","doi-asserted-by":"crossref","first-page":"774","DOI":"10.1007\/s0023901-0079-9","article-title":"Sequence of PRAT satellite DNA \u201cfrozen\u201d in some Coleopteran species","volume":"54","author":"Mravinac","year":"2002","journal-title":"J Mol Evol"},{"issue":"4","key":"2019042010125990200_evz061-B64","doi-asserted-by":"crossref","first-page":"542","DOI":"10.1007\/s00239-004-0342-y","article-title":"Preservation and high sequence conservation of satellite DNAs suggest functional constraints","volume":"61","author":"Mravinac","year":"2005","journal-title":"J Mol Evol"},{"issue":"4","key":"2019042010125990200_evz061-B65","doi-asserted-by":"crossref","first-page":"513","DOI":"10.1590\/S1415-475738420150094","article-title":"Evolution of satellite DNA sequences in two tribes of Bovidae: a cautionary tale","volume":"38","author":"Nieddu","year":"2015","journal-title":"Genet Mol Biol"},{"key":"2019042010125990200_evz061-B201"},{"key":"2019042010125990200_evz061-B66","doi-asserted-by":"crossref","first-page":"27","DOI":"10.1016\/j.micron.2012.11.010","article-title":"The involvement of repetitive sequences in the remodelling of karyotypes: the Phodopus genomes (Rodentia, Cricetidae)","volume":"46","author":"Pa\u00e7o","year":"2013","journal-title":"Micron"},{"issue":"5","key":"2019042010125990200_evz061-B67","doi-asserted-by":"crossref","first-page":"1717","DOI":"10.1007\/s00438-015-1036-4","article-title":"A novel satellite DNA isolated in Pecten jacobaeus shows high sequence similarity among molluscs","volume":"290","author":"Petraccioli","year":"2015","journal-title":"Mol Genet Genomics"},{"key":"2019042010125990200_evz061-B68","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1159\/000337116","article-title":"Satellite DNA-mediated effects on genome regulation","volume":"7","author":"Pezer","year":"2012","journal-title":"Genome Dyn"},{"issue":"2","key":"2019042010125990200_evz061-B69","doi-asserted-by":"crossref","first-page":"e1000845","DOI":"10.1371\/journal.pgen.1000845","article-title":"Uncoupling of satellite DNA and centromeric function in the genus Equus","volume":"6","author":"Piras","year":"2010","journal-title":"PLoS Genet"},{"issue":"1-2","key":"2019042010125990200_evz061-B70","doi-asserted-by":"crossref","first-page":"72","DOI":"10.1016\/j.gene.2007.11.013","article-title":"Satellite DNAs between selfishness and functionality: structure, genomics and evolution of tandem repeats in centromeric (hetero) chromatin","volume":"409","author":"Plohl","year":"2008","journal-title":"Gene"},{"key":"2019042010125990200_evz061-B71","doi-asserted-by":"crossref","first-page":"126","DOI":"10.1159\/000337122","article-title":"Satellite DNA evolution","volume":"7","author":"Plohl","year":"2012","journal-title":"Genome Dyn"},{"issue":"4","key":"2019042010125990200_evz061-B72","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1007\/s00412-014-0462-0","article-title":"Centromere identity from the DNA point of view","volume":"123","author":"Plohl","year":"2014","journal-title":"Chromosoma"},{"issue":"6","key":"2019042010125990200_evz061-B73","doi-asserted-by":"crossref","first-page":"543","DOI":"10.1038\/hdy.2009.141","article-title":"Long-term conservation vs high sequence divergence: the case of an extraordinarily old satellite DNA in bivalve mollusks","volume":"104","author":"Plohl","year":"2010","journal-title":"Heredity"},{"issue":"2","key":"2019042010125990200_evz061-B74","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1007\/s00412-014-0493-6","article-title":"Centromere sliding on a mammalian chromosome","volume":"124","author":"Purgato","year":"2015","journal-title":"Chromosoma"},{"key":"2019042010125990200_evz061-B75","doi-asserted-by":"crossref","first-page":"e03254","DOI":"10.7554\/eLife.03254","article-title":"A long non-coding RNA is required for targeting centromeric protein A to the human centromere","volume":"3","author":"Qu\u00e9net","year":"2014","journal-title":"Elife"},{"key":"2019042010125990200_evz061-B76","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1007\/978-1-59745-039-3_10","volume-title":"Genomic disorders","author":"Rocchi","year":"2006"},{"issue":"3","key":"2019042010125990200_evz061-B77","doi-asserted-by":"crossref","first-page":"441","DOI":"10.1007\/s10577-015-9489-1","article-title":"Evolutionary dynamics of two satellite DNA families in rock lizards of the genus Iberolacerta (Squamata, Lacertidae): different histories but common traits","volume":"23","author":"Rojo","year":"2015","journal-title":"Chromosome Res"},{"issue":"12","key":"2019042010125990200_evz061-B78","doi-asserted-by":"crossref","first-page":"2549","DOI":"10.1093\/gbe\/evt202","article-title":"Tandem repeat-containing MITEs in the clam Donax trunculus","volume":"5","author":"\u0160atovi\u0107","year":"2013","journal-title":"Genome Biol Evol"},{"key":"2019042010125990200_evz061-B79","doi-asserted-by":"crossref","first-page":"997","DOI":"10.1186\/s12864-016-3347-1","article-title":"Adjacent sequences disclose potential for intra-genomic dispersal of satellite DNA repeats and suggest a complex network with transposable elements","volume":"17","author":"Satovi\u0107","year":"2016","journal-title":"BMC Genomics"},{"key":"2019042010125990200_evz061-B80","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.ympev.2014.08.014","article-title":"Insights on genome size evolution from a miniature inverted repeat transposon driving a satellite DNA","volume":"81","author":"Scalvenzi","year":"2014","journal-title":"Mol Phylogenet Evol"},{"issue":"4","key":"2019042010125990200_evz061-B81","doi-asserted-by":"crossref","first-page":"443","DOI":"10.1007\/s00412-016-0620-7","article-title":"Structure of centromere chromatin: from nucleosome to chromosomal architecture","volume":"126","author":"Schalch","year":"2017","journal-title":"Chromosoma"},{"issue":"5","key":"2019042010125990200_evz061-B82","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1016\/S1360-1385(98)01223-0","article-title":"Genomes, genes and junk: the large-scale organization of plant chromosomes","volume":"3","author":"Schmidt","year":"1998","journal-title":"Trends Plant Sci"},{"key":"2019042010125990200_evz061-B202"},{"issue":"7104","key":"2019042010125990200_evz061-B83","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1038\/nature04979","article-title":"A genomic code for nucleosome positioning","volume":"442","author":"Segal","year":"2006","journal-title":"Nature"},{"key":"2019042010125990200_evz061-B84","first-page":"297","article-title":"Satellite DNA: agent of chromosomal evolution in mammals. A review","volume":"9","author":"Slamovits","year":"2002","journal-title":"Mastozool Neotrop"},{"key":"2019042010125990200_evz061-B85","doi-asserted-by":"crossref","first-page":"28","DOI":"10.1016\/j.gde.2015.03.010","article-title":"Diversity in the organization of centromeric chromatin","volume":"31","author":"Steiner","year":"2015","journal-title":"Curr Opin Genet Dev"},{"key":"2019042010125990200_evz061-B86","doi-asserted-by":"crossref","first-page":"457.","DOI":"10.1007\/s10577-011-9208-5","article-title":"Genomic size of CENP-A domain is proportional to total alpha satellite array size at human centromeres and expands in cancer cells","volume":"19","author":"Sullivan","year":"2011","journal-title":"Chromosome Res"},{"issue":"3","key":"2019042010125990200_evz061-B87","doi-asserted-by":"crossref","first-page":"977","DOI":"10.1534\/genetics.117.300620","article-title":"Simple and complex centromeric satellites in Drosophila sibling species","volume":"208","author":"Talbert","year":"2018","journal-title":"Genetics"},{"issue":"4","key":"2019042010125990200_evz061-B88","doi-asserted-by":"crossref","first-page":"1271","DOI":"10.1093\/nar\/10.4.1271","article-title":"Sequence analysis of bovine satellite I DNA (1.715 gm\/cm3)","volume":"10","author":"Taparowsky","year":"1982","journal-title":"Nucleic Acids Res"},{"issue":"18","key":"2019042010125990200_evz061-B89","doi-asserted-by":"crossref","first-page":"5503","DOI":"10.1093\/nar\/10.18.5503","article-title":"Structure of 1.711 b gm\/cm3 bovine satellite DNA: evolutionary relationship to satellite I","volume":"10","author":"Taparowsky","year":"1982","journal-title":"Nucleic Acids Res"},{"issue":"22","key":"2019042010125990200_evz061-B90","doi-asserted-by":"crossref","first-page":"5955","DOI":"10.1093\/emboj\/cdf612","article-title":"Variation in satellite DNA profiles\u2014causes and effects","volume":"21","author":"Ugarkovi\u0107","year":"2002","journal-title":"EMBO J"},{"key":"2019042010125990200_evz061-B91","doi-asserted-by":"crossref","first-page":"53","DOI":"10.1007\/978-3-642-00182-6_3","article-title":"Centromere-competent DNA: structure and evolution","volume":"48","author":"Ugarkovic","year":"2009","journal-title":"Prog Mol Subcell Biol"},{"issue":"1","key":"2019042010125990200_evz061-B92","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1159\/000381840","article-title":"A high-resolution comparative chromosome map of Cricetus cricetus and Peromyscus eremicus reveals the involvement of constitutive heterochromatin in breakpoint regions","volume":"145","author":"Vieira-da-Silva","year":"2015","journal-title":"Cytogenet Genome Res"},{"key":"2019042010125990200_evz061-B93","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1007\/978-3-642-16502-3_5","volume-title":"Long non-coding RNAs","author":"Vourc\u2019h","year":"2011"},{"issue":"11","key":"2019042010125990200_evz061-B94","doi-asserted-by":"crossref","first-page":"e1000743","DOI":"10.1371\/journal.pgen.1000743","article-title":"Maize centromere structure and evolution: sequence analysis of centromeres 2 and 5 reveals dynamic loci shaped primarily by retrotransposons","volume":"5","author":"Wolfgruber","year":"2009","journal-title":"PLoS Genet"},{"issue":"50","key":"2019042010125990200_evz061-B95","doi-asserted-by":"crossref","first-page":"E4875","DOI":"10.1073\/pnas.1319548110","article-title":"The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres","volume":"110","author":"Zhang","year":"2013","journal-title":"Proc Nat Acad Sci U S A"}],"container-title":["Genome Biology and Evolution"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/gbe\/article-pdf\/11\/4\/1152\/28490171\/evz061.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,9,14]],"date-time":"2023-09-14T16:27:36Z","timestamp":1694708856000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/gbe\/article\/11\/4\/1152\/5393269"}},"subtitle":[],"editor":[{"given":"Rachel","family":"O\u2019Neill","sequence":"additional","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2019,3,19]]},"references-count":97,"journal-issue":{"issue":"4","published-online":{"date-parts":[[2019,3,19]]},"published-print":{"date-parts":[[2019,4,1]]}},"URL":"https:\/\/doi.org\/10.1093\/gbe\/evz061","relation":{},"ISSN":["1759-6653"],"issn-type":[{"value":"1759-6653","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2019,4]]},"published":{"date-parts":[[2019,3,19]]}}}