{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,11]],"date-time":"2026-05-11T10:01:22Z","timestamp":1778493682193,"version":"3.51.4"},"reference-count":102,"publisher":"Oxford University Press (OUP)","issue":"4","license":[{"start":{"date-parts":[[2023,12,7]],"date-time":"2023-12-07T00:00:00Z","timestamp":1701907200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2024,3,29]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>The gynoecium is critical for the reproduction of flowering plants as it contains the ovules and the tissues that foster pollen germination, growth, and guidance. These tissues, known as the reproductive tract (ReT), comprise the stigma, style, and transmitting tract (TT). The ReT and ovules originate from the carpel margin meristem (CMM) within the pistil. SHOOT MERISTEMLESS (STM) is a key transcription factor for meristem formation and maintenance. In all above-ground meristems, including the CMM, local STM downregulation is required for organ formation. However, how this downregulation is achieved in the CMM is unknown. Here, we have studied the role of HISTONE DEACETYLASE 19 (HDA19) in Arabidopsis (Arabidopsis thaliana) during ovule and ReT differentiation based on the observation that the hda19-3 mutant displays a reduced ovule number and fails to differentiate the TT properly. Fluorescence-activated cell sorting coupled with RNA-sequencing revealed that in the CMM of hda19-3 mutants, genes promoting organ development are downregulated while meristematic markers, including STM, are upregulated. HDA19 was essential to downregulate STM in the CMM, thereby allowing ovule formation and TT differentiation. STM is ectopically expressed in hda19-3 at intermediate stages of pistil development, and its downregulation by RNA interference alleviated the hda19-3 phenotype. Chromatin immunoprecipitation assays indicated that STM is a direct target of HDA19 during pistil development and that the transcription factor SEEDSTICK is also required to regulate STM via histone acetylation. Thus, we identified factors required for the downregulation of STM in the CMM, which is necessary for organogenesis and tissue differentiation.<\/jats:p>","DOI":"10.1093\/plphys\/kiad629","type":"journal-article","created":{"date-parts":[[2023,12,7]],"date-time":"2023-12-07T22:40:35Z","timestamp":1701988835000},"page":"2117-2135","source":"Crossref","is-referenced-by-count":10,"title":["HISTONE DEACETYLASE19 Controls Ovule Number Determination and Transmitting Tract Differentiation"],"prefix":"10.1093","volume":"194","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6241-4143","authenticated-orcid":false,"given":"Silvia","family":"Manrique","sequence":"first","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4929-222X","authenticated-orcid":false,"given":"Alex","family":"Cavalleri","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4415-4004","authenticated-orcid":false,"given":"Andrea","family":"Guazzotti","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2832-6785","authenticated-orcid":false,"given":"Gonzalo H","family":"Villarino","sequence":"additional","affiliation":[{"name":"Department of Plant and Microbial Biology, North Carolina State University , Raleigh, NC 27606 , USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3855-2447","authenticated-orcid":false,"given":"Sara","family":"Simonini","sequence":"additional","affiliation":[{"name":"Department of Plant and Microbial Biology & Zurich-Basel Plant Science Center, University of Zurich , Zollikerstrasse 107, Zurich CH-8008 , Switzerland"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6257-8914","authenticated-orcid":false,"given":"Aureliano","family":"Bombarely","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7346-360X","authenticated-orcid":false,"given":"Tetsuya","family":"Higashiyama","sequence":"additional","affiliation":[{"name":"Institute of Transformative Bio-Molecules (ITbM), Nagoya University , Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601 , Japan"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0522-8974","authenticated-orcid":false,"given":"Ueli","family":"Grossniklaus","sequence":"additional","affiliation":[{"name":"Department of Plant and Microbial Biology & Zurich-Basel Plant Science Center, University of Zurich , Zollikerstrasse 107, Zurich CH-8008 , Switzerland"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3644-2890","authenticated-orcid":false,"given":"Chiara","family":"Mizzotti","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3665-7592","authenticated-orcid":false,"given":"Ana Marta","family":"Pereira","sequence":"additional","affiliation":[{"name":"Faculdade de Ci\u00eancias da Universidade do Porto, Departamento de Biologia, Universidade do Porto , rua do Campo Alegre, Porto 4169-007 , Portugal"},{"name":"LAQV Requimte, Sustainable Chemistry, Universidade do Porto , Porto 4169-007 , Portugal"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9421-2538","authenticated-orcid":false,"given":"Silvia","family":"Coimbra","sequence":"additional","affiliation":[{"name":"Faculdade de Ci\u00eancias da Universidade do Porto, Departamento de Biologia, Universidade do Porto , rua do Campo Alegre, Porto 4169-007 , Portugal"},{"name":"LAQV Requimte, Sustainable Chemistry, Universidade do Porto , Porto 4169-007 , Portugal"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0398-2113","authenticated-orcid":false,"given":"Subramanian","family":"Sankaranarayanan","sequence":"additional","affiliation":[{"name":"Department of Biological Sciences and Engineering, Indian Institute of Technology Gandhinagar , Palaj, Gujarat 382355 , India"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3724-4116","authenticated-orcid":false,"given":"Elisabetta","family":"Onelli","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7563-7634","authenticated-orcid":false,"given":"Simona","family":"Masiero","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3978-1030","authenticated-orcid":false,"given":"Robert G","family":"Franks","sequence":"additional","affiliation":[{"name":"Department of Plant and Microbial Biology, North Carolina State University , Raleigh, NC 27606 , USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8415-1399","authenticated-orcid":false,"given":"Lucia","family":"Colombo","sequence":"additional","affiliation":[{"name":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano , Via Giovanni Celoria 26, Milan 20133 , Italy"}]}],"member":"286","published-online":{"date-parts":[[2023,12,7]]},"reference":[{"issue":"14","key":"2024032920214182900_kiad629-B1","doi-asserted-by":"crossref","first-page":"2663","DOI":"10.1242\/dev.02864","article-title":"Common regulatory networks in leaf and fruit patterning revealed by mutations in the Arabidopsis ASYMMETRIC LEAVES1 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medial domain development","volume":"146","author":"Azhakanandam","year":"2008","journal-title":"Plant Physiol"},{"issue":"W1","key":"2024032920214182900_kiad629-B5","doi-asserted-by":"crossref","first-page":"W147","DOI":"10.1093\/nar\/gkw419","article-title":"Heatmapper: web-enabled heat mapping for all","volume":"44","author":"Babicki","year":"2016","journal-title":"Nucleic Acids Res"},{"issue":"3","key":"2024032920214182900_kiad629-B6","doi-asserted-by":"crossref","first-page":"823","DOI":"10.1242\/dev.119.3.823","article-title":"Formation of the shoot apical meristem in Arabidopsis thaliana: an analysis of development in the wild type and in the shoot meristemless mutant","volume":"119","author":"Barton","year":"1993","journal-title":"Development"},{"issue":"51","key":"2024032920214182900_kiad629-B7","doi-asserted-by":"crossref","first-page":"21146","DOI":"10.1073\/pnas.1210789109","article-title":"Arabidopsis lateral organ boundaries negatively regulates brassinosteroid 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MERISTEM ACTIVITY, a conserved missing link in the regulation of floral meristem termination in arabidopsis and tomato","volume":"30","author":"Bollier","year":"2018","journal-title":"Plant Cell"},{"key":"2024032920214182900_kiad629-B11","doi-asserted-by":"crossref","first-page":"155","DOI":"10.1016\/S0070-2153(08)60316-6","article-title":"Molecular genetics of gynoecium development in Arabidopsis","volume":"45","author":"Bowman","year":"1999","journal-title":"Curr Top Dev Biol"},{"issue":"8","key":"2024032920214182900_kiad629-B12","doi-asserted-by":"crossref","first-page":"1957","DOI":"10.1242\/dev.129.8.1957","article-title":"ASYMMETRIC LEAVES1 reveals know gene redundancy in Arabidopsis","volume":"129","author":"Byrne","year":"2002","journal-title":"Development"},{"key":"2024032920214182900_kiad629-B13","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1016\/j.cpb.2015.08.002","article-title":"Towards a comprehensive and dynamic gynoecium gene regulatory 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female reproductive tract in flowering plants","volume":"18","author":"Crawford","year":"2008","journal-title":"Curr Biol."},{"issue":"1","key":"2024032920214182900_kiad629-B20","doi-asserted-by":"crossref","first-page":"5","DOI":"10.1104\/pp.105.063743","article-title":"Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis","volume":"139","author":"Czechowski","year":"2005","journal-title":"Plant Physiol"},{"issue":"8","key":"2024032920214182900_kiad629-B21","doi-asserted-by":"crossref","first-page":"2846","DOI":"10.1016\/j.celrep.2020.01.101","article-title":"SEEDSTICK controls Arabidopsis fruit size by regulating Cytokinin levels and FRUITFULL","volume":"30","author":"Di Marzo","year":"2020","journal-title":"Cell Rep"},{"key":"2024032920214182900_kiad629-B22","doi-asserted-by":"crossref","first-page":"526","DOI":"10.3389\/fpls.2020.00526","article-title":"MADS-box and bHLH transcription factors coordinate transmitting tract 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