{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,5,14]],"date-time":"2025-05-14T00:07:47Z","timestamp":1747181267970,"version":"3.40.5"},"reference-count":23,"publisher":"Microbiology Society","issue":"3","license":[{"start":{"date-parts":[[2019,5,1]],"date-time":"2019-05-01T00:00:00Z","timestamp":1556668800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,5,1]]},"abstract":"<jats:p>\n                  <jats:bold>Background.<\/jats:bold>\n                  <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">Staphylococcus aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> is a common cause of nosocomial infections. Epidemiological typing of <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">S. aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> enables control of its spread. The objective of this study was to investigate coagulase gene polymorphisms of <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">S. aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> isolated from patients at Kosti Hospital in Sudan.<\/jats:p>\n               <jats:p>\n                  <jats:bold>Methods.<\/jats:bold> In total, 110 <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">S. aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> isolates were recovered from 110 patients who were enrolled in the study. <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">S. aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> strains were isolated on blood agar and MacConkey agar and then identified by conventional tests. Resistance to methicillin was determined by detection of the <jats:italic>mecA<\/jats:italic> gene. Polymorphism in the coagulase gene (<jats:italic>coa<\/jats:italic>) was investigated using PCR followed by <jats:italic>Alu<\/jats:italic>I RFLP analysis.<\/jats:p>\n               <jats:p>\n                  <jats:bold>Results.<\/jats:bold> Methicillin-resistant <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">S. aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> accounted for 62\/110 (56 %) of the isolates. PCR of the <jats:italic>coa<\/jats:italic> gene showed two different amplicons, one of 680 bp detected in 83\/110 (75.5 %) of the isolates and one of 790 bp detected in 27\/110 (24.5 %). When digested with the <jats:italic>Alu<\/jats:italic>I enzyme, the 790 bp amplicon resulted in three restriction fragments of 500, 210 and 80 bp (<jats:italic>coa<\/jats:italic>1). Restriction of the 680 bp amplicon gave two patterns; the first (<jats:italic>coa<\/jats:italic>2) was found in 22\/110 (20 %) of the isolates and showed four fragments of 210, 210, 180 and 80 bp, and the second (<jats:italic>coa<\/jats:italic>3) was found in 61\/110 (55.5 %) and revealed three fragments of 390, 210 and 80 bp. Most of the <jats:italic>coa<\/jats:italic>3 isolates (75.4%) were methicillin-resistant.<\/jats:p>\n               <jats:p>\n                  <jats:bold>Conclusion.<\/jats:bold> Three polymorphic genotypes of <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.11043\" xlink:type=\"simple\">S. aureus<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> were identified in patients at Kosti Hospital. The <jats:italic>coa<\/jats:italic>3 genotype was the predominant one and was mostly detected in methicillin-resistant isolates.<\/jats:p>","DOI":"10.1099\/acmi.0.000026","type":"journal-article","created":{"date-parts":[[2019,5,15]],"date-time":"2019-05-15T16:13:31Z","timestamp":1557936811000},"source":"Crossref","is-referenced-by-count":4,"title":["Coagulase gene polymorphisms of Staphylococcus aureus isolates from patients at Kosti Teaching Hospital, Sudan"],"prefix":"10.1099","volume":"1","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-8112-3461","authenticated-orcid":false,"given":"Omer Mohammed Ali","family":"Ibrahim","sequence":"first","affiliation":[{"name":"1 Department of Microbiology, Faculty of Medical Laboratory Sciences, University of El-Imam El-Mahdi, Kosti, Sudan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Naser Eldin","family":"Bilal","sequence":"additional","affiliation":[{"name":"2 Department of Medical Microbiology, Faculty of Medical Laboratory Sciences, University of Khartoum, Khartoum, Sudan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mohammed E. 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Effect of growth conditions","volume":"192","author":"Reynolds","year":"1985","journal-title":"FEBS Lett"},{"key":"R4","doi-asserted-by":"publisher","DOI":"10.4103\/0255-0857.96727"},{"key":"R5","doi-asserted-by":"publisher","DOI":"10.1056\/NEJM200101043440102"},{"key":"R6","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(05)70295-4"},{"key":"R7","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.14.3.547-560.2001"},{"key":"R8","doi-asserted-by":"publisher","DOI":"10.1099\/00222615-41-6-441"},{"key":"R9","volume-title":"Methicillin-resistant Staphylococcus aureus in Finland: recent changes in the epidemiology, long term facility aspects, and phenotypic and molecular detection of isolates","volume":"83","author":"Kerttula","year":"2007"},{"key":"R10","doi-asserted-by":"crossref","first-page":"1874","DOI":"10.1128\/jcm.27.8.1874-1879.1989","article-title":"Restriction enzyme analysis of plasmid DNA and bacteriophage typing of paired Staphylococcus aureus blood culture isolates","volume":"27","author":"Hartstein","year":"1989","journal-title":"J Clin Microbiol"},{"key":"R11","doi-asserted-by":"crossref","first-page":"362","DOI":"10.1128\/jcm.30.2.362-369.1992","article-title":"Epidemiologic typing of Staphylococcus aureus by DNA restriction fragment length polymorphisms of rRNA genes: elucidation of the clonal nature of a group of bacteriophage-nontypeable, ciprofloxacin-resistant, methicillin-susceptible S. aureus isolates","volume":"30","author":"Blumberg","year":"1992","journal-title":"J Clin Microbiol"},{"key":"R12","doi-asserted-by":"crossref","first-page":"407","DOI":"10.1128\/jcm.32.2.407-415.1994","article-title":"Comparison of traditional and molecular methods of typing isolates of Staphylococcus aureus","volume":"32","author":"Tenover","year":"1994","journal-title":"J Clin Microbiol"},{"key":"R13","doi-asserted-by":"crossref","first-page":"2141","DOI":"10.1128\/jcm.33.8.2141-2144.1995","article-title":"Molecular genotyping of methicillin-resistant Staphylococcus aureus via fluorophore-enhanced repetitive-sequence PCR","volume":"33","author":"Del Vecchio","year":"1995","journal-title":"J Clin Microbiol"},{"key":"R14","first-page":"201","volume-title":"Jawetz, Melnick, and Adelberg\u2019s Medical Microbiology","author":"Brooks","year":"2013"},{"key":"R15","doi-asserted-by":"publisher","DOI":"10.3844\/ajidsp.2009.163.169"},{"key":"R16","doi-asserted-by":"crossref","first-page":"1642","DOI":"10.1128\/jcm.30.7.1642-1645.1992","article-title":"Molecular typing of Staphylococcus aureus on the basis of coagulase gene polymorphisms","volume":"30","author":"Goh","year":"1992","journal-title":"J Clin Microbiol"},{"key":"R17","first-page":"227","volume-title":"Medical Laboratory Manual for Tropical Countries vol II","author":"Cheesbrough","year":"1993"},{"key":"R18","first-page":"143","article-title":"Antibiotic susceptibility pattern among Staphylococcus spp. with emphasis on detection of mecA gene in methicillin-resistant Staphylococcus aureus isolates","volume":"4","author":"Rahimi","year":"2009","journal-title":"Arch Clin Infect Dis"},{"key":"R19","doi-asserted-by":"crossref","first-page":"1083","DOI":"10.1128\/JCM.36.4.1083-1089.1998","article-title":"Molecular typing of Staphylococcus aureus based on PCR restriction fragment length polymorphism and DNA sequence analysis of the coagulase gene","volume":"36","author":"Hookey","year":"1998","journal-title":"J Clin Microbiol"},{"key":"R20","first-page":"111","article-title":"Molecular genotyping of MRSA","volume":"5","author":"Bin Hameed","year":"2010","journal-title":"Sudan JMS"},{"key":"R21","first-page":"31","article-title":"Epidemiological typing of Staphylococcus aureus by DNA restriction fragment length polymorphism of coa gene","volume":"78","author":"Sanjiv","year":"2008","journal-title":"Veterinars kiarhi"},{"key":"R22","doi-asserted-by":"publisher","DOI":"10.2478\/v10181-011-0044-5"},{"key":"R23","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2009.01.001"}],"container-title":["Access Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/acmi\/10.1099\/acmi.0.000026?crawler=true&mimetype=application\/pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,12,15]],"date-time":"2023-12-15T19:47:31Z","timestamp":1702669651000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/acmi\/10.1099\/acmi.0.000026"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,5,1]]},"references-count":23,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2019,5,1]]}},"URL":"https:\/\/doi.org\/10.1099\/acmi.0.000026","relation":{},"ISSN":["2516-8290"],"issn-type":[{"type":"electronic","value":"2516-8290"}],"subject":[],"published":{"date-parts":[[2019,5,1]]}}}