{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,31]],"date-time":"2026-10-31T04:16:05Z","timestamp":1793420165663,"version":"4.5.0"},"reference-count":32,"publisher":"Microbiology Society","issue":"Pt_9","funder":[{"name":"French Government\u2019s Investissement d\u2019Avenir program, Laboratoire d\u2019Excellence \u2018Integrative Biology of Emerging Infectious Diseases\u2019","award":["ANR-10-LABX-62-IBEID"],"award-info":[{"award-number":["ANR-10-LABX-62-IBEID"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2014,9,1]]},"abstract":"<jats:p>Strains previously classified as members of<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.10789\" xlink:type=\"simple\"><jats:italic>Klebsiella pneumoniae<\/jats:italic><\/jats:ext-link><\/jats:named-content>phylogroups KpI, KpII-A, KpII-B and KpIII were characterized by 16S rRNA (<jats:italic>rrs<\/jats:italic>) gene sequencing, multilocus sequence analysis based on<jats:italic>rpoB<\/jats:italic>,<jats:italic>fusA<\/jats:italic>,<jats:italic>gapA<\/jats:italic>,<jats:italic>gyrA<\/jats:italic>and<jats:italic>leuS<\/jats:italic>genes, average nucleotide identity and biochemical characteristics. Phylogenetic analysis demonstrated that KpI and KpIII corresponded to<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.10789\" xlink:type=\"simple\"><jats:italic>K. pneumoniae<\/jats:italic><\/jats:ext-link><\/jats:named-content>and<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.8644\" xlink:type=\"simple\"><jats:italic>Klebsiella variicola<\/jats:italic><\/jats:ext-link><\/jats:named-content>, respectively, whereas KpII-A and KpII-B formed two well-demarcated sequence clusters distinct from other members of the genus<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"genus\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\"><jats:italic>Klebsiella<\/jats:italic><\/jats:ext-link><\/jats:named-content>. Average nucleotide identity between KpII-A and KpII-B was 96.4\u200a%, whereas values lower than 94\u200a% were obtained for both groups when compared with<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.10789\" xlink:type=\"simple\"><jats:italic>K. pneumoniae<\/jats:italic><\/jats:ext-link><\/jats:named-content>and<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.8644\" xlink:type=\"simple\"><jats:italic>K. variicola<\/jats:italic><\/jats:ext-link><\/jats:named-content>. Biochemical properties differentiated KpII-A, KpII-B,<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.10789\" xlink:type=\"simple\"><jats:italic>K. pneumoniae<\/jats:italic><\/jats:ext-link><\/jats:named-content>and<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.8644\" xlink:type=\"simple\"><jats:italic>K. variicola<\/jats:italic><\/jats:ext-link><\/jats:named-content>, with acid production from adonitol and<jats:sc>l<\/jats:sc>-sorbose and ability to use 3-phenylproprionate, 5-keto-<jats:sc>d<\/jats:sc>-gluconate and tricarballylic acid as sole carbon sources being particularly useful. Based on their genetic and phenotypic characteristics, we propose the names<jats:italic>Klebsiella quasipneumoniae<\/jats:italic>subsp.<jats:italic>quasipneumoniae<\/jats:italic>subsp. nov. and<jats:italic>K. quasipneumoniae<\/jats:italic>subsp.<jats:italic>similipneumoniae<\/jats:italic>subsp. nov. for strains of KpII-A and KpII-B, respectively. The type strain of<jats:italic>K. quasipneumoniae<\/jats:italic>sp. nov. and of<jats:italic>K. quasipneumoniae<\/jats:italic>subsp.<jats:italic>quasipneumoniae<\/jats:italic>subsp. nov. is 01A030<jats:sup>T<\/jats:sup>(\u200a=\u200aSB11<jats:sup>T<\/jats:sup>\u200a=\u200aCIP 110771<jats:sup>T<\/jats:sup>\u200a=\u200aDSM 28211<jats:sup>T<\/jats:sup>). The type strain of<jats:italic>K. quasipneumoniae<\/jats:italic>subsp.<jats:italic>similipneumoniae<\/jats:italic>subsp. nov. is 07A044<jats:sup>T<\/jats:sup>(\u200a=\u200aSB30<jats:sup>T<\/jats:sup>\u200a=\u200aCIP 110770<jats:sup>T<\/jats:sup>\u200a=\u200aDSM 28212<jats:sup>T<\/jats:sup>). Both strains were isolated from human blood cultures. This work also showed that<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.8643\" xlink:type=\"simple\"><jats:italic>Klebsiella singaporensis<\/jats:italic><\/jats:ext-link><\/jats:named-content>is a junior heterotypic synonym of<jats:named-content xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" content-type=\"species\" xlink:type=\"simple\"><jats:ext-link ext-link-type=\"uri\" xlink:href=\"http:\/\/dx.doi.org\/10.1601\/nm.8644\" xlink:type=\"simple\"><jats:italic>K. variicola<\/jats:italic><\/jats:ext-link><\/jats:named-content>.<\/jats:p>","DOI":"10.1099\/ijs.0.062737-0","type":"journal-article","created":{"date-parts":[[2014,6,24]],"date-time":"2014-06-24T06:28:57Z","timestamp":1403591337000},"page":"3146-3152","source":"Crossref","is-referenced-by-count":214,"title":["Description of Klebsiella quasipneumoniae sp. nov., isolated from human infections, with two subspecies, Klebsiella quasipneumoniae subsp. quasipneumoniae subsp. nov. and Klebsiella quasipneumoniae subsp. similipneumoniae subsp. nov., and demonstration that Klebsiella singaporensis is a junior heterotypic synonym of Klebsiella variicola"],"prefix":"10.1099","volume":"64","author":[{"given":"Sylvain","family":"Brisse","sequence":"first","affiliation":[{"name":"CNRS, UMR 3525, Paris, France"},{"name":"Institut Pasteur, Microbial Evolutionary Genomics Unit, Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Virginie","family":"Passet","sequence":"additional","affiliation":[{"name":"CNRS, UMR 3525, Paris, France"},{"name":"Institut Pasteur, Microbial Evolutionary Genomics Unit, Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Patrick A. D.","family":"Grimont","sequence":"additional","affiliation":[{"name":"Unit\u00e9 Biodiversit\u00e9 des Bact\u00e9ries Pathog\u00e8nes Emergentes, Institut Pasteur, Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"345","reference":[{"key":"r1","doi-asserted-by":"crossref","first-page":"495","DOI":"10.1078\/1438-4221-00228","article-title":"Sequencing of 16S rDNA of Klebsiella: taxonomic relations within the genus and to other Enterobacteriaceae","volume":"292","author":"Boye","year":"2003","journal-title":"Int J Med Microbiol"},{"key":"r2","doi-asserted-by":"crossref","first-page":"915","DOI":"10.1099\/00207713-51-3-915","article-title":"Phylogenetic diversity of Klebsiella pneumoniae and Klebsiella oxytoca clinical isolates revealed by randomly amplified polymorphic DNA, gyrA and parC genes sequencing and automated ribotyping","volume":"51","author":"Brisse","year":"2001","journal-title":"Int J Syst Evol 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