{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T16:07:23Z","timestamp":1789056443236,"version":"build-2803163510"},"reference-count":47,"publisher":"Microbiology Society","issue":"9","funder":[{"DOI":"10.13039\/501100002527","name":"Kyonggi University","doi-asserted-by":"crossref","award":["Research Grant 2025"],"award-info":[{"award-number":["Research Grant 2025"]}],"id":[{"id":"10.13039\/501100002527","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2026,9,10]]},"abstract":"<jats:p>\n                    Three Gram-stain-negative bacterial strains, KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    , KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    and CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    isolated from oil-contaminated soil in Korea and China were identified. Phylogenetic analysis based on 16S rRNA gene sequences placed the strains within the family\n                    <jats:italic>Xanthobacteraceae<\/jats:italic>\n                    , with KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    and KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    affiliated with the genus\n                    <jats:italic>Xanthobacter<\/jats:italic>\n                    and CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    with the genus\n                    <jats:italic>Aquabacter<\/jats:italic>\n                    . Sequence similarities to type strains of validly published species were below 98.5%. Core genome phylogeny showed that the four strains formed distinct clusters occupying different positions in the phylogenetic tree and exhibited different closest relatives. Average nucleotide identity, average amino acid identity and digital DNA\u2013DNA hybridization (dDDH) values between KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    and KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    and members of\n                    <jats:italic>Xanthobacter<\/jats:italic>\n                    were 78.7\u201387.0%, 74.8\u201387.8% and 22.7\u201332.3%, respectively, whereas those between CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    and members of\n                    <jats:italic>Aquabacter<\/jats:italic>\n                    were 80.2\u201380.7%, 79.6\u201380.5% and 23.4\u201323.9%, supporting their assignment as novel species. The DNA G+C contents were 68.0, 69.9 and 66.5 mol% for KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    , KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    and CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    , respectively. Strains KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    and KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    contained phosphatidylcholine, phosphatidylglycerol, phosphatidyl monomethyl ethanolamine, diphosphatidylglycerol (DPG) and an unidentified glycolipid as major polar lipids, whereas DPG was absent in strain CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    . The primary fatty acids were summed feature 8 (C\n                    <jats:sub>18\u200a:\u200a1<\/jats:sub>\n                    \u03c97c and\/or C\n                    <jats:sub>18\u200a:\u200a1<\/jats:sub>\n                    \u03c96c), cyclo C\n                    <jats:sub>19\u200a:\u200a0<\/jats:sub>\n                    \u03c98c and C\n                    <jats:sub>16\u200a:\u200a0<\/jats:sub>\n                    . On the basis of phylogenetic, genomic and phenotypic evidence, strains KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    and KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    represent two novel species of the genus\n                    <jats:italic>Xanthobacter<\/jats:italic>\n                    , for which the names\n                    <jats:italic>Xanthobacter pollutisoli<\/jats:italic>\n                    sp. nov. (type strain KR7-65\n                    <jats:sup>T<\/jats:sup>\n                    =KACC 23453\n                    <jats:sup>T<\/jats:sup>\n                    =NBRC 116939\n                    <jats:sup>T<\/jats:sup>\n                    ) and\n                    <jats:italic>Xanthobacter luteus<\/jats:italic>\n                    sp. nov. (type strain KR7-225\n                    <jats:sup>T<\/jats:sup>\n                    =KACC 23282\n                    <jats:sup>T<\/jats:sup>\n                    =NBRC 116940\n                    <jats:sup>T<\/jats:sup>\n                    ) are proposed. Strain CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    represents a novel species of the genus\n                    <jats:italic>Aquabacter<\/jats:italic>\n                    , for which the name\n                    <jats:italic>Aquabacter albus<\/jats:italic>\n                    sp. nov. (type strain CN5-332\n                    <jats:sup>T<\/jats:sup>\n                    =KACC 23276\n                    <jats:sup>T<\/jats:sup>\n                    =CCTCC AB 2024343\n                    <jats:sup>T<\/jats:sup>\n                    ) is proposed.\n                  <\/jats:p>","DOI":"10.1099\/ijsem.0.007274","type":"journal-article","created":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T15:16:56Z","timestamp":1789053416000},"source":"Crossref","is-referenced-by-count":0,"title":["Proposal of three novel species of the family Xanthobacteraceae: Xanthobacter pollutisoli sp. nov., Xanthobacter luteus sp. nov. and Aquabacter albus sp. nov., isolated from oil-contaminated soils"],"prefix":"10.1099","volume":"76","author":[{"given":"Thi Tuyet Nhan","family":"Le","sequence":"first","affiliation":[{"name":"Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jaisoo","family":"Kim","sequence":"additional","affiliation":[{"name":"Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"345","reference":[{"key":"R1","doi-asserted-by":"publisher","DOI":"10.1007\/BF00446318"},{"key":"R2","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-28-4-573"},{"key":"R3","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.006909"},{"key":"R4","doi-asserted-by":"publisher","DOI":"10.1016\/S0723-2020(87)80030-9"},{"key":"R5","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-29-4-283"},{"key":"R6","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.02231-0"},{"key":"R7","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.004972"},{"key":"R8","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-47-2-394"},{"key":"R9","doi-asserted-by":"publisher","DOI":"10.1099\/00221287-139-4-815"},{"key":"R10","doi-asserted-by":"publisher","DOI":"10.1111\/j.1432-1033.1971.tb01330.x"},{"key":"R11","doi-asserted-by":"publisher","DOI":"10.1007\/s003740050024"},{"key":"R12","doi-asserted-by":"publisher","DOI":"10.1111\/j.1574-6968.1982.tb00038.x"},{"key":"R13","doi-asserted-by":"crossref","DOI":"10.5772\/intechopen.102066","article-title":"Xanthobacter autotrophicusan endophytic beneficial bacterium for wheat and other plants: a short review","author":"S\u00e1nchez-Ya\u00f1ez","year":"2022"},{"key":"R14","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.65.4.1589-1595.1999"},{"key":"R15","doi-asserted-by":"publisher","DOI":"10.1016\/S0964-8305(98)00069-9"},{"key":"R16","doi-asserted-by":"publisher","DOI":"10.1128\/aem.57.6.1853-1857.1991"},{"key":"R17","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01982-15"},{"key":"R18","doi-asserted-by":"publisher","DOI":"10.1007\/s002030050459"},{"key":"R19","doi-asserted-by":"publisher","DOI":"10.1007\/BF01692862"},{"key":"R20","doi-asserted-by":"publisher","DOI":"10.1128\/aem.49.3.673-677.1985"},{"key":"R21","doi-asserted-by":"publisher","DOI":"10.1271\/bbb.68.557"},{"key":"R22","doi-asserted-by":"publisher","DOI":"10.1007\/BF00248607"},{"key":"R23","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.003585"},{"key":"R24","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.001755"},{"key":"R25","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts252"},{"key":"R26","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msab120"},{"key":"R27","doi-asserted-by":"publisher","DOI":"10.1007\/BF01731581"},{"key":"R28","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/10.4.409"},{"key":"R29","doi-asserted-by":"publisher","DOI":"10.1093\/oxfordjournals.molbev.a040454"},{"key":"R30","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2012.0021"},{"key":"R31","doi-asserted-by":"publisher","DOI":"10.1101\/gr.186072.114"},{"key":"R32","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.4163"},{"key":"R33","doi-asserted-by":"publisher","DOI":"10.1007\/s12275-018-8014-6"},{"key":"R34","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0009490"},{"key":"R35","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu033"},{"key":"R36","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msab120"},{"key":"R37","doi-asserted-by":"publisher","DOI":"10.1099\/ijsem.0.000760"},{"key":"R38","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-10210-3"},{"key":"R39","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkz333"},{"key":"R40","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-9-75"},{"key":"R41","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkz310"},{"key":"R42","first-page":"6","volume-title":"Tech Note 101","volume":"1","author":"Sasser","year":"2001"},{"key":"R43","doi-asserted-by":"publisher","DOI":"10.1016\/0167-7012(84)90018-6"},{"key":"R44","doi-asserted-by":"publisher","DOI":"10.1186\/s40168-022-01295-y"},{"key":"R45","doi-asserted-by":"publisher","DOI":"10.1007\/s10482-017-0844-4"},{"key":"R46","doi-asserted-by":"publisher","DOI":"10.1128\/JB.187.18.6258-6264.2005"},{"key":"R47","doi-asserted-by":"publisher","DOI":"10.1099\/ijs.0.64483-0"}],"container-title":["International Journal of Systematic and Evolutionary Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/ijsem\/10.1099\/ijsem.0.007274?crawler=true&mimetype=application\/pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T15:16:57Z","timestamp":1789053417000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/ijsem\/10.1099\/ijsem.0.007274"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9,10]]},"references-count":47,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2026,9,10]]}},"URL":"https:\/\/doi.org\/10.1099\/ijsem.0.007274","relation":{},"ISSN":["1466-5026","1466-5034"],"issn-type":[{"value":"1466-5026","type":"print"},{"value":"1466-5034","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,9,10]]}}}