{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,29]],"date-time":"2026-06-29T17:58:40Z","timestamp":1782755920289,"version":"3.54.5"},"reference-count":26,"publisher":"Microbiology Society","issue":"5","license":[{"start":{"date-parts":[[2020,5,1]],"date-time":"2020-05-01T00:00:00Z","timestamp":1588291200000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020,5,1]]},"abstract":"<jats:p>Much has happened here since the local news media trumpeted the first Australian COVID-19 fatality, and stirred up a medieval fear of contagion. We now need to take a step back to examine the logic underlying the use of our limited COVID-19 countermeasures. Emerging infectious diseases by their nature, pose new challenges to the diagnostic-treatment-control nexus, and push our concepts of causality beyond the limits of the conventional Koch-Henle approach to aetiology. We need to use contemporary methods of assessing causality to ensure that clinical, laboratory and public health measures draw on a rational, evidence-based approach to argumentation. The purpose of any aetiological hypothesis is to derive actionable insights into this latest emerging infectious disease. This review is an introduction to a conversation with medical microbiologists, which will be supported by a moderated blog.<\/jats:p>","DOI":"10.1099\/jmm.0.001191","type":"journal-article","created":{"date-parts":[[2020,4,22]],"date-time":"2020-04-22T20:26:27Z","timestamp":1587587187000},"page":"653-656","source":"Crossref","is-referenced-by-count":8,"title":["Logic in the time of coronavirus"],"prefix":"10.1099","volume":"69","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-8559-8245","authenticated-orcid":false,"given":"Timothy J. J.","family":"Inglis","sequence":"first","affiliation":[{"name":"Department of Microbiology, PathWest Laboratory Medicine WA, Nedlands, WA 6009, Australia"},{"name":"Division of Pathology and Laboratory Medicine, School of Medicine, University of Western Australia, Western Australia, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"345","reference":[{"key":"R1","doi-asserted-by":"publisher","DOI":"10.1099\/jmm.0.47179-0"},{"key":"R2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2020.02.001"},{"key":"R3","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(20)30557-2"},{"key":"R4","doi-asserted-by":"publisher","DOI":"10.1001\/jama.2020.3204"},{"key":"R5","article-title":"Clinical and computed tomographic imaging features of novel coronavirus pneumonia caused by SARS-CoV-2","author":"YH","year":"2020","journal-title":"J Infect"},{"key":"R6","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMp2002125"},{"key":"R7","doi-asserted-by":"publisher","DOI":"10.7326\/M20-0504"},{"key":"R8","doi-asserted-by":"publisher","DOI":"10.3390\/jcm9020538"},{"key":"R9","doi-asserted-by":"publisher","DOI":"10.7326\/M20-0504"},{"key":"R10","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijid.2020.02.060"},{"key":"R11","doi-asserted-by":"publisher","DOI":"10.3760\/cma.j.cn112338-20200210-00086"},{"key":"R12","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa2001017"},{"key":"R13","doi-asserted-by":"publisher","DOI":"10.1097\/CM9.0000000000000782"},{"key":"R14","doi-asserted-by":"crossref","DOI":"10.1016\/j.jinf.2020.02.018","article-title":"Characteristics of COVID-19 infection in Beijing","author":"Tian","year":"2020","journal-title":"J Infect"},{"key":"R15","doi-asserted-by":"publisher","DOI":"10.2807\/1560-7917.ES.2020.25.9.2000178"},{"key":"R16","doi-asserted-by":"publisher","DOI":"10.1097\/RLI.0000000000000672"},{"key":"R17","doi-asserted-by":"publisher","DOI":"10.1148\/radiol.2020200642"},{"key":"R18","doi-asserted-by":"publisher","DOI":"10.1126\/science.abb2762"},{"key":"R19","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2020.02.052"},{"key":"R20","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1008392"},{"key":"R21","doi-asserted-by":"publisher","DOI":"10.1002\/jmv.25750"},{"key":"R22","doi-asserted-by":"crossref","DOI":"10.1016\/S2214-109X(20)30074-7","article-title":"Centre for the mathematical modelling of infectious diseases COVID-19 Working group, Funk S, Eggo RM. feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts","author":"Hellewell","year":"2020","journal-title":"Lancet Glob Health"},{"key":"R23","doi-asserted-by":"publisher","DOI":"10.3346\/jkms.2020.35.e79"},{"key":"R24","doi-asserted-by":"publisher","DOI":"10.3760\/cma.j.issn.1001-0939.2020.0019"},{"key":"R25","doi-asserted-by":"publisher","DOI":"10.1016\/j.jcrc.2020.03.005"},{"key":"R26","doi-asserted-by":"publisher","DOI":"10.3390\/v12030254"}],"container-title":["Journal of Medical Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/jmm\/10.1099\/jmm.0.001191?crawler=true&mimetype=application\/pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,12,15]],"date-time":"2023-12-15T02:25:02Z","timestamp":1702607102000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/jmm\/10.1099\/jmm.0.001191"}},"subtitle":["Read Tim Inglis\u2019 coronastream blog"],"short-title":[],"issued":{"date-parts":[[2020,5,1]]},"references-count":26,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2020,5,1]]}},"URL":"https:\/\/doi.org\/10.1099\/jmm.0.001191","relation":{},"ISSN":["0022-2615","1473-5644"],"issn-type":[{"value":"0022-2615","type":"print"},{"value":"1473-5644","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,5,1]]}}}