{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,4]],"date-time":"2026-08-04T20:02:42Z","timestamp":1785873762292,"version":"3.56.0"},"reference-count":61,"publisher":"Microbiology Society","issue":"3","license":[{"start":{"date-parts":[[2021,3,1]],"date-time":"2021-03-01T00:00:00Z","timestamp":1614556800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"funder":[{"name":"Medical Research Council","award":["MR\/S004769\/1"],"award-info":[{"award-number":["MR\/S004769\/1"]}]},{"name":"Medical Research Council","award":["MR\/R00241X\/1"],"award-info":[{"award-number":["MR\/R00241X\/1"]}]},{"DOI":"10.13039\/501100000266","name":"Engineering and Physical Sciences Research Council","doi-asserted-by":"crossref","award":["EP\/R51164X\/1"],"award-info":[{"award-number":["EP\/R51164X\/1"]}],"id":[{"id":"10.13039\/501100000266","id-type":"DOI","asserted-by":"crossref"}]},{"DOI":"10.13039\/501100000270","name":"Natural Environment Research Council","doi-asserted-by":"crossref","award":["2109393"],"award-info":[{"award-number":["2109393"]}],"id":[{"id":"10.13039\/501100000270","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2021,3,1]]},"abstract":"<jats:p>\n                  <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> species occupy a wide range of environmental and animal niches, and occasionally cause opportunistic infections that are resistant to multiple antibiotics. In particular, <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10789\" xlink:type=\"simple\">Klebsiella pneumoniae<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> (<jats:italic>Kpne<\/jats:italic>) has gained notoriety as a major nosocomial pathogen, due principally to the rise in non-susceptibility to carbapenems and other beta-lactam antibiotics. Whilst it has been proposed that the urban water cycle facilitates transmission of pathogens between clinical settings and the environment, the level of risk posed by resistant <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> strains in hospital wastewater remains unclear. We used whole genome sequencing (WGS) to compare <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> species in contemporaneous samples of wastewater from an English hospital and influent to the associated wastewater treatment plant (WWTP). As we aimed to characterize representative samples of <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> communities, we did not actively select for antibiotic resistance (other than for ampicillin), nor for specific <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> species. Two species, <jats:italic>Kpne<\/jats:italic> and <jats:italic>K<\/jats:italic>. (<jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3285\" xlink:type=\"simple\">Raoultella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic>) <jats:italic>ornithinolytica<\/jats:italic> (<jats:italic>Korn<\/jats:italic>), were of equal dominance in the hospital wastewater, and four other <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> species were present in low abundance in this sample. In contrast, despite being the species most closely associated with healthcare settings, <jats:italic>Kpne<\/jats:italic> was the dominant species within the WWTP influent. In total, 29\u200a% of all isolates harboured the <jats:italic>bla<\/jats:italic>\n                  <jats:sub>OXA-48<\/jats:sub> gene on a pOXA-48-like plasmid, and these isolates were almost exclusively recovered from the hospital wastewater. This gene was far more common in <jats:italic>Korn<\/jats:italic> (68\u200a% of isolates) than in <jats:italic>Kpne<\/jats:italic> (3.4\u200a% of isolates). In general plasmid-borne, but not chromosomal, resistance genes were significantly enriched in the hospital wastewater sample. These data implicate hospital wastewater as an important reservoir for antibiotic-resistant <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3202\" xlink:type=\"simple\">Klebsiella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic>, and point to an unsuspected role of species within the <jats:italic>\n                     <jats:named-content content-type=\"genus\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3285\" xlink:type=\"simple\">Raoultella<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> group in the maintenance and dissemination of plasmid-borne <jats:italic>bla<\/jats:italic>\n                  <jats:sub>OXA-48<\/jats:sub>. This article contains data hosted by Microreact.<\/jats:p>","DOI":"10.1099\/mgen.0.000509","type":"journal-article","created":{"date-parts":[[2021,1,8]],"date-time":"2021-01-08T16:49:52Z","timestamp":1610124592000},"source":"Crossref","is-referenced-by-count":8,"title":["A high prevalence of bla\n            OXA-48 in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England"],"prefix":"10.1099","volume":"7","author":[{"given":"Marjorie J.","family":"Gibbon","sequence":"first","affiliation":[{"name":"The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, UK"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Natacha","family":"Couto","sequence":"additional","affiliation":[{"name":"The Milner Centre for Evolution, Department of Biology and Biochemistry, University of Bath, Bath, 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