{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T23:49:34Z","timestamp":1787010574780,"version":"build-2736575974"},"reference-count":65,"publisher":"Microbiology Society","issue":"3","license":[{"start":{"date-parts":[[2023,3,2]],"date-time":"2023-03-02T00:00:00Z","timestamp":1677715200000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2023,3,2]]},"abstract":"<jats:p>\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">Campylobacter fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    is a pathogen, which is primarily associated with fertility problems in sheep and cattle. In humans, it can cause severe infections that require antimicrobial treatment. However, knowledge on the development of antimicrobial resistance in\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    is limited. Moreover, the lack of epidemiological cut-off values (ECOFFs) and clinical breakpoints for\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    hinders consistent reporting about wild-type and non-wild-type susceptibility. The aim of this study was to determine the phenotypic susceptibility pattern of\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    and to determine the\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    resistome [the collection of all antimicrobial resistance genes (ARGs) and their precursors] to describe the genomic basis of antimicrobial resistance in\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    isolates over time. Whole-genome sequences of 295\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    .\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    isolates, including isolates that were isolated in the period 1939 till the mid 1940s, before the usage of non-synthetic antimicrobials, were analysed for the presence of resistance markers, and phenotypic antimicrobial susceptibility was obtained for a selection of 47 isolates.\n                    <jats:italic>\n                      <jats:named-content content-type=\"subspecies\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3787\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    subspecies\n                    <jats:italic>\n                      <jats:named-content content-type=\"subspecies\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3787\" xlink:type=\"simple\">fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    (\n                    <jats:italic>Cff<\/jats:italic>\n                    ) isolates showed multiple phenotypic antimicrobial resistances compared to\n                    <jats:italic>\n                      <jats:named-content content-type=\"subspecies\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3795\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    subspecies\n                    <jats:italic>\n                      <jats:named-content content-type=\"subspecies\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.3795\" xlink:type=\"simple\">venerealis<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    (\n                    <jats:italic>Cfv<\/jats:italic>\n                    ) isolates that were only intrinsic resistant to nalidixic acid and trimethoprim.\n                    <jats:italic>Cff<\/jats:italic>\n                    isolates showed elevated minimal inhibitory concentrations for cefotaxime and cefquinome that were observed in isolates from 1943 onwards, and\n                    <jats:italic>Cff<\/jats:italic>\n                    isolates contained\n                    <jats:italic>gyrA<\/jats:italic>\n                    substitutions, which conferred resistance to ciprofloxacin. Resistances to aminoglycosides, tetracycline and phenicols were linked to acquired ARGs on mobile genetic elements. A plasmid-derived\n                    <jats:italic>tet<\/jats:italic>\n                    (O) gene in a bovine\n                    <jats:italic>Cff<\/jats:italic>\n                    isolate in 1999 was the first mobile genetic element observed, followed by detection of mobile elements containing\n                    <jats:italic>tet<\/jats:italic>\n                    (O)\n                    <jats:italic>-aph(3\u2032)-III<\/jats:italic>\n                    and\n                    <jats:italic>tet<\/jats:italic>\n                    (44)-\n                    <jats:italic>ant(6)-Ib<\/jats:italic>\n                    genes, and a plasmid from a single human isolate in 2003, carrying\n                    <jats:italic>aph(3\u2032)-III-ant(6)-Ib<\/jats:italic>\n                    and a chloramphenicol resistance gene (\n                    <jats:italic>cat<\/jats:italic>\n                    ). The presence of ARGs in multiple mobile elements distributed among different\n                    <jats:italic>Cff<\/jats:italic>\n                    lineages highlights the risk for spread and further emergence of AMR in\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    . Surveillance for these resistances requires the establishment of ECOFFs for\n                    <jats:italic>\n                      <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.10647\" xlink:type=\"simple\">C. fetus<\/jats:ext-link>\n                      <\/jats:named-content>\n                    <\/jats:italic>\n                    .\n                  <\/jats:p>","DOI":"10.1099\/mgen.0.000934","type":"journal-article","created":{"date-parts":[[2023,3,2]],"date-time":"2023-03-02T12:18:41Z","timestamp":1677759521000},"source":"Crossref","is-referenced-by-count":8,"title":["Antimicrobial resistance in Campylobacter fetus: emergence and genomic evolution"],"prefix":"10.1099","volume":"9","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8181-3393","authenticated-orcid":false,"given":"Linda","family":"van der Graaf-van Bloois","sequence":"first","affiliation":[{"name":"WHO Collaborating Centre for Reference and Research on Campylobacter and Antimicrobial Resistance from a One Health Perspective \/ WOAH Reference Laboratory for Campylobacteriosis, Utrecht\/Lelystad, Netherlands"},{"name":"Department Biomolecular Health Sciences, Division Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Birgitta","family":"Duim","sequence":"additional","affiliation":[{"name":"WHO Collaborating Centre for Reference and Research on Campylobacter and Antimicrobial Resistance from a One Health Perspective \/ WOAH Reference Laboratory for Campylobacteriosis, Utrecht\/Lelystad, Netherlands"},{"name":"Department Biomolecular Health Sciences, Division Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, 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