{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T19:31:53Z","timestamp":1791919913563,"version":"4.3.4"},"reference-count":90,"publisher":"Microbiology Society","issue":"12","license":[{"start":{"date-parts":[[2023,12,19]],"date-time":"2023-12-19T00:00:00Z","timestamp":1702944000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100007137","name":"Helse Nord RHF","doi-asserted-by":"crossref","award":["HNF1362-17"],"award-info":[{"award-number":["HNF1362-17"]}],"id":[{"id":"10.13039\/501100007137","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2023,12,19]]},"abstract":"<jats:p>Between 2010 and 2015 the incidence of vancomycin-resistant <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.5535\" xlink:type=\"simple\">Enterococcus faecium<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> (VRE<jats:italic>fm<\/jats:italic>) in Norway increased dramatically. Hence, we selected (1) a random subset of vancomycin-resistant enterococci (VRE) from the Norwegian Surveillance System for Communicable Diseases (2010\u201315; <jats:italic>n<\/jats:italic>=239) and (2) Norwegian vancomycin-susceptible <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.5535\" xlink:type=\"simple\">E. faecium<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> (VSE<jats:italic>fm<\/jats:italic>) bacteraemia isolates from the national surveillance system for antimicrobial resistance in microbes (2008 and 2014; <jats:italic>n<\/jats:italic>=261) for further analysis. Whole-genome sequences were collected for population structure, <jats:italic>van<\/jats:italic> gene cluster, mobile genetic element and virulome analysis, as well as antimicrobial susceptibility testing. Comparative genomic and phylogeographical analyses were performed with complete genomes of global <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.5535\" xlink:type=\"simple\">E. faecium<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> strains from the National Center for Biotechnology Information (NCBI) (1946\u20132022; <jats:italic>n<\/jats:italic>=272). All Norwegian VRE<jats:italic>fm<\/jats:italic> and most of the VSE<jats:italic>fm<\/jats:italic> clustered with global hospital-associated sequence types (STs) in the phylogenetic subclade A1. The <jats:italic>vanB2<\/jats:italic> subtype carried by chromosomal Tn<jats:italic>1549<\/jats:italic> integrative conjugative elements was the dominant <jats:italic>van<\/jats:italic> type. The major Norwegian VRE<jats:italic>fm<\/jats:italic> cluster types (CTs) were in accordance with concurrent European CTs. The dominant <jats:italic>vanB<\/jats:italic>-type VRE<jats:italic>fm<\/jats:italic> CTs, ST192-CT3\/26 and ST117-CT24, were mostly linked to a single hospital in Norway where the clones spread after independent chromosomal acquisition of Tn<jats:italic>1549<\/jats:italic>. The less prevalent <jats:italic>vanA<\/jats:italic> VRE were associated with more diverse CTs and <jats:italic>vanA<\/jats:italic> carrying Inc18 or RepA_N plasmids with toxin\u2013antitoxin systems. Only 5\u200a% of the Norwegian VRE were <jats:italic>Enterococcus faecalis,<\/jats:italic> all of which contained <jats:italic>vanB<\/jats:italic>. The Norwegian VRE<jats:italic>fm<\/jats:italic> and VSE<jats:italic>fm<\/jats:italic> isolates harboured CT-specific virulence factor (VF) profiles supporting biofilm formation and colonization. The dominant VRE<jats:italic>fm<\/jats:italic> CTs in general hosted more virulence determinants than VSE<jats:italic>fm<\/jats:italic>. The phylogenetic clade B VSE<jats:italic>fm<\/jats:italic> isolates (<jats:italic>n<\/jats:italic>=21)<jats:italic>,<\/jats:italic> recently classified as <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.23232\" xlink:type=\"simple\">Enterococcus lactis<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic>, harboured fewer VFs than <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.5535\" xlink:type=\"simple\">E. faecium<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> in general, and particularly subclade A1 isolates. In conclusion, the population structure of Norwegian <jats:italic>\n                     <jats:named-content content-type=\"species\">\n                        <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" ext-link-type=\"uri\" xlink:href=\"http:\/\/doi.org\/10.1601\/nm.5535\" xlink:type=\"simple\">E. faecium<\/jats:ext-link>\n                     <\/jats:named-content>\n                  <\/jats:italic> isolates mirrors the globally prevalent clones and particularly concurrent European VRE<jats:italic>fm<\/jats:italic>\/VSE<jats:italic>fm<\/jats:italic> CTs. Novel chromosomal acquisition of <jats:italic>vanB2<\/jats:italic> on Tn<jats:italic>1549<\/jats:italic> from the gut microbiota, however, formed a single major hospital VRE<jats:italic>fm<\/jats:italic> outbreak. Dominant VRE<jats:italic>fm<\/jats:italic> CTs contained more VFs than VSE<jats:italic>fm<\/jats:italic>.<\/jats:p>","DOI":"10.1099\/mgen.0.001160","type":"journal-article","created":{"date-parts":[[2023,12,19]],"date-time":"2023-12-19T16:18:36Z","timestamp":1703002716000},"source":"Crossref","is-referenced-by-count":14,"title":["The population structure of vancomycin-resistant and -susceptible Enterococcus faecium in a low-prevalence antimicrobial resistance setting is highly influenced by circulating global hospital-associated clones"],"prefix":"10.1099","volume":"9","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-0395-120X","authenticated-orcid":false,"given":"Mushtaq","family":"AL Rubaye","sequence":"first","affiliation":[{"name":"Research group for Host\u2013Microbe Interactions, Department of Medical Biology, UiT The Arctic University of Norway, Troms\u00f8, 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