{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,5]],"date-time":"2025-11-05T14:12:32Z","timestamp":1762351952050},"reference-count":56,"publisher":"Microbiology Society","issue":"12","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007,12,1]]},"DOI":"10.1099\/mic.0.2007\/012831-0","type":"journal-article","created":{"date-parts":[[2007,11,30]],"date-time":"2007-11-30T02:16:25Z","timestamp":1196388985000},"page":"3939-3947","source":"Crossref","is-referenced-by-count":69,"title":["Making sense of quorum sensing in lactobacilli: a special focus on Lactobacillus plantarum WCFS1"],"prefix":"10.1099","volume":"153","author":[{"given":"Mark H. J.","family":"Sturme","sequence":"first","affiliation":[{"name":"Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, The Netherlands"},{"name":"TI Food and Nutrition, Nieuwe Kanaal 9A, 6709 PA Wageningen, The Netherlands"}]},{"given":"Christof","family":"Francke","sequence":"additional","affiliation":[{"name":"Radboud University Nijmegen Medical Centre\/NCMLS, CMBI 260, PO Box 9101, 6500 HB Nijmegen, The Netherlands"},{"name":"TI Food and Nutrition, Nieuwe Kanaal 9A, 6709 PA Wageningen, The Netherlands"}]},{"given":"Roland J.","family":"Siezen","sequence":"additional","affiliation":[{"name":"Radboud University Nijmegen Medical Centre\/NCMLS, CMBI 260, PO Box 9101, 6500 HB Nijmegen, The Netherlands"},{"name":"NIZO Food Research BV, 6710 BA Ede, The Netherlands"},{"name":"TI Food and Nutrition, Nieuwe Kanaal 9A, 6709 PA Wageningen, The Netherlands"}]},{"given":"Willem M.","family":"de Vos","sequence":"additional","affiliation":[{"name":"Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, The Netherlands"},{"name":"TI Food and Nutrition, Nieuwe Kanaal 9A, 6709 PA Wageningen, The Netherlands"}]},{"given":"Michiel","family":"Kleerebezem","sequence":"additional","affiliation":[{"name":"NIZO Food Research BV, 6710 BA Ede, The Netherlands"},{"name":"Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, The Netherlands"},{"name":"TI Food and Nutrition, Nieuwe Kanaal 9A, 6709 PA Wageningen, The Netherlands"}]}],"member":"345","reference":[{"key":"R1","doi-asserted-by":"crossref","first-page":"88","DOI":"10.1046\/j.1365-2672.1998.00480.x","article-title":"The normal Lactobacillus flora of healthy human rectal and oral mucosa","volume":"85","author":"Ahrne","year":"1998","journal-title":"J Appl Microbiol"},{"key":"R2","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J Mol Biol"},{"key":"R3","doi-asserted-by":"crossref","first-page":"2269","DOI":"10.1128\/AEM.64.6.2269-2272.1998","article-title":"Antagonistic activity of Lactobacillus plantarum C11: two new two-peptide bacteriocins, plantaricins EF and JK, and the induction factor plantaricin A","volume":"64","author":"Anderssen","year":"1998","journal-title":"Appl Environ Microbiol"},{"key":"R4","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1128\/JB.186.1.15-21.2004","article-title":"Diversifying selection at the Bacillus quorum-sensing locus and determinants of modification specificity during synthesis of the ComX pheromone","volume":"186","author":"Ansaldi","year":"2004","journal-title":"J Bacteriol"},{"key":"R5","doi-asserted-by":"crossref","first-page":"131","DOI":"10.1016\/S0168-1605(99)00082-3","article-title":"Food fermentations: role of microorganisms in food production and preservation","volume":"50","author":"Caplice","year":"1999","journal-title":"Int J Food Microbiol"},{"key":"R6","doi-asserted-by":"crossref","first-page":"W273","DOI":"10.1093\/nar\/gkl237","article-title":"bagel: a web-based bacteriocin genome mining tool","volume":"34","author":"de Jong","year":"2006","journal-title":"Nucleic Acids Res"},{"key":"R7","doi-asserted-by":"crossref","first-page":"4472","DOI":"10.1128\/JB.178.15.4472-4483.1996","article-title":"Characterization of the locus responsible for the bacteriocin production in Lactobacillus plantarum C11","volume":"178","author":"Diep","year":"1996","journal-title":"J Bacteriol"},{"key":"R8A","doi-asserted-by":"crossref","first-page":"1766","DOI":"10.1111\/j.1365-2672.2007.03417.x","article-title":"Identification of an operon and inducing peptide involved in the production of lactacin B by Lactobacillus acidophilus","volume":"103","author":"Dobson","year":"2007","journal-title":"J Appl Microbiol"},{"key":"R8","doi-asserted-by":"crossref","first-page":"85","DOI":"10.1111\/j.1574-6976.2000.tb00534.x","article-title":"Class IIa bacteriocins: biosynthesis, structure and activity","volume":"24","author":"Ennahar","year":"2000","journal-title":"FEMS Microbiol Rev"},{"key":"R9","doi-asserted-by":"crossref","first-page":"973","DOI":"10.1099\/00221287-148-4-973","article-title":"Characterization of the genetic locus responsible for the production of ABP-118, a novel bacteriocin produced by the probiotic bacterium Lactobacillus salivarius subsp. salivarius UCC118","volume":"148","author":"Flynn","year":"2002","journal-title":"Microbiology"},{"key":"R10","doi-asserted-by":"crossref","first-page":"269","DOI":"10.1128\/JB.176.2.269-275.1994","article-title":"Quorum-sensing in bacteria: the LuxR-LuxI family of cell density-responsive transcriptional regulators","volume":"176","author":"Fuqua","year":"1994","journal-title":"J Bacteriol"},{"key":"R11","doi-asserted-by":"crossref","first-page":"2379","DOI":"10.1099\/00221287-147-8-2379","article-title":"The evolution of bacterial LuxI and LuxR quorum sensing regulators","volume":"147","author":"Gray","year":"2001","journal-title":"Microbiology"},{"key":"R12","doi-asserted-by":"crossref","first-page":"139","DOI":"10.1016\/S0065-2911(08)60167-8","article-title":"The histidine protein kinase superfamily","volume":"41","author":"Grebe","year":"1999","journal-title":"Adv Microb Physiol"},{"key":"R13","doi-asserted-by":"crossref","first-page":"229","DOI":"10.1111\/j.1365-2958.1995.tb02295.x","article-title":"A family of bacteriocin ABC transporters carry out proteolytic processing of their substrates concomitant with export","volume":"16","author":"Ha\u030avarstein","year":"1995","journal-title":"Mol Microbiol"},{"key":"R14","doi-asserted-by":"crossref","first-page":"p","DOI":"10.1128\/9781555818319","volume-title":"Two-Component Signal Transduction","author":"Hoch","year":"1995"},{"key":"R15","doi-asserted-by":"crossref","first-page":"12055","DOI":"10.1073\/pnas.92.26.12055","article-title":"Cell density control of staphylococcal virulence mediated by an octapeptide pheromone","volume":"92","author":"Ji","year":"1995","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R16","doi-asserted-by":"crossref","first-page":"2027","DOI":"10.1126\/science.276.5321.2027","article-title":"Bacterial interference caused by autoinducing peptide variants","volume":"276","author":"Ji","year":"1997","journal-title":"Science"},{"key":"R17","doi-asserted-by":"crossref","first-page":"6913","DOI":"10.1128\/JB.185.23.6913-6920.2003","article-title":"Structural analysis of the peptide pheromone receptor PlnB, a histidine protein kinase from Lactobacillus plantarum","volume":"185","author":"Johnsborg","year":"2003","journal-title":"J Bacteriol"},{"key":"R18","doi-asserted-by":"crossref","first-page":"895","DOI":"10.1046\/j.1365-2958.1997.4251782.x","article-title":"Quorum sensing by peptide pheromones and two-component signal-transduction systems in Gram-positive bacteria","volume":"24","author":"Kleerebezem","year":"1997","journal-title":"Mol Microbiol"},{"key":"R19","doi-asserted-by":"crossref","first-page":"1990","DOI":"10.1073\/pnas.0337704100","article-title":"Complete genome sequence of Lactobacillus plantarum WCFS1","volume":"100","author":"Kleerebezem","year":"2003","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R20","doi-asserted-by":"crossref","first-page":"567","DOI":"10.1006\/jmbi.2000.4315","article-title":"Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes","volume":"305","author":"Krogh","year":"2001","journal-title":"J Mol Biol"},{"key":"R21","doi-asserted-by":"crossref","first-page":"1199","DOI":"10.1128\/JB.01351-06","article-title":"Evolutionary genomics of lactic acid bacteria","volume":"189","author":"Makarova","year":"2007","journal-title":"J Bacteriol"},{"key":"R22","doi-asserted-by":"crossref","first-page":"15611","DOI":"10.1073\/pnas.0607117103","article-title":"Comparative genomics of the lactic acid bacteria","volume":"103","author":"Makarova","year":"2006","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R23","doi-asserted-by":"crossref","first-page":"1556","DOI":"10.1128\/JB.186.5.1556-1564.2004","article-title":"Induction of plantaricin production in Lactobacillus plantarum NC8 after coculture with specific gram-positive bacteria is mediated by an autoinduction mechanism","volume":"186","author":"Maldonado","year":"2004","journal-title":"J Bacteriol"},{"key":"R24","doi-asserted-by":"crossref","first-page":"285","DOI":"10.1111\/j.1574-6976.2001.tb00579.x","article-title":"Lantibiotics: structure, biosynthesis and mode of action","volume":"25","author":"McAuliffe","year":"2001","journal-title":"FEMS Microbiol Rev"},{"key":"R25","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1016\/S0378-1097(02)01192-8","article-title":"Possible quorum sensing in the rumen microbial community: detection of quorum-sensing signal molecules from rumen bacteria","volume":"219","author":"Mitsumori","year":"2003","journal-title":"FEMS Microbiol Lett"},{"key":"R26","doi-asserted-by":"crossref","first-page":"6119","DOI":"10.1128\/JB.187.17.6119-6127.2005","article-title":"Exploring Lactobacillus plantarum genome diversity using microarrays","volume":"187","author":"Molenaar","year":"2005","journal-title":"J Bacteriol"},{"key":"R27","doi-asserted-by":"crossref","first-page":"949","DOI":"10.1016\/j.resmic.2005.05.005","article-title":"Sakacin P non-producing Lactobacillus sakei strains contain homologues of the sakacin P gene cluster","volume":"156","author":"M\u00f8retr\u00f8","year":"2005","journal-title":"Res Microbiol"},{"key":"R28","doi-asserted-by":"crossref","first-page":"1227","DOI":"10.1046\/j.1365-2958.1996.751447.x","article-title":"Transcriptional control of the agr -dependent virulence gene regulator, RNAIII, in Staphylococcus aureus","volume":"21","author":"Morfeldt","year":"1996","journal-title":"Mol Microbiol"},{"key":"R29","doi-asserted-by":"crossref","first-page":"8321","DOI":"10.1128\/JB.00865-06","article-title":"Revised model for Enterococcus faecalis fsr quorum-sensing system: the small open reading frame fsrD encodes the gelatinase biosynthesis-activating pheromone propeptide corresponding to staphylococcal AgrD","volume":"188","author":"Nakayama","year":"2006","journal-title":"J Bacteriol"},{"key":"R30","first-page":"175","article-title":"Regulation of group II peptide bacteriocin synthesis by quorum-sensing mechanisms","volume-title":"Cell\u2013Cell Signaling in Bacteria","author":"Nes","year":"1999"},{"key":"R31","doi-asserted-by":"crossref","first-page":"2453","DOI":"10.1093\/nar\/30.11.2453","article-title":"A novel type of conserved DNA-binding domain in the transcriptional regulators of the AlgR\/AgrA\/LytR family","volume":"30","author":"Nikolskaya","year":"2002","journal-title":"Nucleic Acids Res"},{"key":"R32","doi-asserted-by":"crossref","first-page":"279","DOI":"10.1023\/A:1020620607611","article-title":"Probiotics: an overview of beneficial effects","volume":"82","author":"Ouwehand","year":"2002","journal-title":"Antonie Van Leeuwenhoek"},{"key":"R33","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1146\/annurev.ge.26.120192.000443","article-title":"Communication modules in bacterial signaling proteins","volume":"26","author":"Parkinson","year":"1992","journal-title":"Annu Rev Genet"},{"key":"R34","doi-asserted-by":"crossref","first-page":"2512","DOI":"10.1073\/pnas.0307327101","article-title":"The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533","volume":"101","author":"Pridmore","year":"2004","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R35","doi-asserted-by":"crossref","first-page":"3372","DOI":"10.1128\/JB.183.11.3372-3382.2001","article-title":"Characterization of fsr , a regulator controlling expression of gelatinase and serine protease in Enterococcus faecalis OG1RF","volume":"183","author":"Qin","year":"2001","journal-title":"J Bacteriol"},{"key":"R36","doi-asserted-by":"crossref","first-page":"16695","DOI":"10.1074\/jbc.M411372200","article-title":"Identification of the putative staphylococcal AgrB catalytic residues involving the proteolytic cleavage of AgrD to generate autoinducing peptide","volume":"280","author":"Qiu","year":"2005","journal-title":"J Biol Chem"},{"key":"R37","doi-asserted-by":"crossref","first-page":"6163","DOI":"10.1128\/JB.179.19.6163-6171.1997","article-title":"Characterization of a locus from Carnobacterium piscicola LV17B involved in bacteriocin production and immunity: evidence for global inducer-mediated transcriptional regulation","volume":"179","author":"Quadri","year":"1997","journal-title":"J Bacteriol"},{"key":"R38","doi-asserted-by":"crossref","first-page":"619","DOI":"10.1046\/j.1365-2958.2000.02029.x","article-title":"Functional analysis of promoters involved in quorum sensing-based regulation of bacteriocin production in Lactobacillus","volume":"37","author":"Ris\u00f8en","year":"2000","journal-title":"Mol Microbiol"},{"key":"R39","doi-asserted-by":"crossref","first-page":"463","DOI":"10.1046\/j.1365-2958.2001.02532.x","article-title":"The LuxS family of bacterial autoinducers: biosynthesis of a novel quorum-sensing signal molecule","volume":"41","author":"Schauder","year":"2001","journal-title":"Mol Microbiol"},{"key":"R40","doi-asserted-by":"crossref","first-page":"5857","DOI":"10.1073\/pnas.95.11.5857","article-title":"smart, a simple modular architecture research tool: identification of signaling domains","volume":"95","author":"Schultz","year":"1998","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R41","doi-asserted-by":"crossref","first-page":"4340","DOI":"10.1128\/JB.00137-06","article-title":"Whole-genome transcription profiling reveals genes up-regulated by growth on fucose in the human gut bacterium \u201c Roseburia inulinivorans \u201d","volume":"188","author":"Scott","year":"2006","journal-title":"J Bacteriol"},{"key":"R42","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1016\/j.copbio.2004.02.002","article-title":"Genome data mining of lactic acid bacteria: the impact of bioinformatics","volume":"15","author":"Siezen","year":"2004","journal-title":"Curr Opin Biotechnol"},{"key":"R43","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1023\/A:1020522919555","article-title":"Cell to cell communication by autoinducing peptides in gram-positive bacteria","volume":"81","author":"Sturme","year":"2002","journal-title":"Antonie Van Leeuwenhoek"},{"key":"R44","doi-asserted-by":"crossref","first-page":"5224","DOI":"10.1128\/JB.187.15.5224-5235.2005","article-title":"An agr -like two-component regulatory system in Lactobacillus plantarum is involved in the production of a novel cyclic peptide and regulation of adherence","volume":"187","author":"Sturme","year":"2005","journal-title":"J Bacteriol"},{"key":"R45","doi-asserted-by":"crossref","first-page":"36","DOI":"10.1186\/1471-2148-4-36","article-title":"Is autoinducer-2 a universal signal for interspecies communication: a comparative genomic and phylogenetic analysis of the synthesis and signal transduction pathways","volume":"4","author":"Sun","year":"2004","journal-title":"BMC Evol Biol"},{"key":"R46","doi-asserted-by":"crossref","first-page":"4876","DOI":"10.1093\/nar\/25.24.4876","article-title":"The clustal_x Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools","volume":"25","author":"Thompson","year":"1997","journal-title":"Nucleic Acids Res"},{"key":"R47","doi-asserted-by":"crossref","first-page":"9274","DOI":"10.1073\/pnas.0603024103","article-title":"The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution","volume":"103","author":"Van de Guchte","year":"2006","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R48","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1186\/1471-2105-8-83","article-title":"Orthology prediction at scalable resolution by phylogenetic tree analysis","volume":"8","author":"Van der Heijden","year":"2007","journal-title":"BMC Bioinformatics"},{"key":"R49","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1023\/A:1020672724450","article-title":"The intestinal LABs","volume":"82","author":"Vaughan","year":"2002","journal-title":"Antonie Van Leeuwenhoek"},{"key":"R50","doi-asserted-by":"crossref","first-page":"11741","DOI":"10.1021\/bi00095a001","article-title":"Structural conservation in the CheY-superfamily","volume":"32","author":"Volz","year":"1993","journal-title":"Biochemistry"},{"key":"R51","doi-asserted-by":"crossref","first-page":"5362","DOI":"10.1128\/JB.171.10.5362-5375.1989","article-title":"Sequence and transcription mapping of Bacillus subtilis competence genes comB and comA , one of which is related to a family of bacterial regulatory determinants","volume":"171","author":"Weinrauch","year":"1989","journal-title":"J Bacteriol"},{"key":"R52","doi-asserted-by":"crossref","first-page":"860","DOI":"10.1101\/gad.4.5.860","article-title":"A Bacillus subtilis regulatory gene product for genetic competence and sporulation resembles sensor protein members of the bacterial two-component signal-transduction systems","volume":"4","author":"Weinrauch","year":"1990","journal-title":"Genes Dev"},{"key":"R53","doi-asserted-by":"crossref","first-page":"191","DOI":"10.1016\/S1369-5274(03)00028-6","article-title":"LuxS quorum sensing: more than just a numbers game","volume":"6","author":"Xavier","year":"2003","journal-title":"Curr Opin Microbiol"},{"key":"R54","doi-asserted-by":"crossref","first-page":"6706","DOI":"10.1128\/JB.186.20.6706-6713.2004","article-title":"Identification of a staphylococcal AgrB segment(s) responsible for group-specific processing of AgrD by gene swapping","volume":"186","author":"Zhang","year":"2004","journal-title":"J Bacteriol"},{"key":"R55","doi-asserted-by":"crossref","first-page":"3616","DOI":"10.1073\/pnas.92.8.3616","article-title":"Identification of a DNA transformation gene required for com101A + expression and supertransformer phenotype in Haemophilus influenzae","volume":"92","author":"Zulty","year":"1995","journal-title":"Proc Natl Acad Sci U S A"}],"container-title":["Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.2007\/012831-0?crawler=true","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,1,20]],"date-time":"2020-01-20T14:15:06Z","timestamp":1579529706000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.2007\/012831-0"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2007,12,1]]},"references-count":56,"journal-issue":{"issue":"12","published-print":{"date-parts":[[2007,12,1]]}},"URL":"https:\/\/doi.org\/10.1099\/mic.0.2007\/012831-0","relation":{},"ISSN":["1350-0872","1465-2080"],"issn-type":[{"value":"1350-0872","type":"print"},{"value":"1465-2080","type":"electronic"}],"subject":[],"published":{"date-parts":[[2007,12,1]]}}}