{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,15]],"date-time":"2026-04-15T18:18:38Z","timestamp":1776277118225,"version":"3.50.1"},"reference-count":58,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","license":[{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/legalcode"}],"funder":[{"DOI":"10.13039\/100000057","name":"National Institute of General Medical Sciences of the National Institutes of Health","doi-asserted-by":"publisher","award":["P20GM104420"],"award-info":[{"award-number":["P20GM104420"]}],"id":[{"id":"10.13039\/100000057","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE Access"],"published-print":{"date-parts":[[2025]]},"DOI":"10.1109\/access.2025.3540769","type":"journal-article","created":{"date-parts":[[2025,2,11]],"date-time":"2025-02-11T18:28:20Z","timestamp":1739298500000},"page":"37724-37736","source":"Crossref","is-referenced-by-count":20,"title":["Comparative Analysis of Multi-Omics Integration Using Graph Neural Networks for Cancer Classification"],"prefix":"10.1109","volume":"13","author":[{"ORCID":"https:\/\/orcid.org\/0009-0005-1126-4356","authenticated-orcid":false,"given":"Fadi","family":"Alharbi","sequence":"first","affiliation":[{"name":"Department of Computer Science, College of Engineering, University of Idaho, Moscow, ID, USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3365-1291","authenticated-orcid":false,"given":"Aleksandar","family":"Vakanski","sequence":"additional","affiliation":[{"name":"Department of Computer Science, College of Engineering, University of Idaho, Moscow, ID, USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9401-6163","authenticated-orcid":false,"given":"Boyu","family":"Zhang","sequence":"additional","affiliation":[{"name":"Department of Computer Science, College of Engineering, University of Idaho, Moscow, ID, USA"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3431-6604","authenticated-orcid":false,"given":"Murtada K.","family":"Elbashir","sequence":"additional","affiliation":[{"name":"Department of Information Systems, College of Computer and Information Sciences, Jouf University, Sakaka, Al-Jouf, Saudi Arabia"}]},{"given":"Mohanad","family":"Mohammed","sequence":"additional","affiliation":[{"name":"School of Mathematics, Statistics and Computer Science, University of KwaZulu-Natal, Pietermaritzburg, South Africa"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/hdy.2010.54"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2024.1378917"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1016\/j.csbj.2021.01.009"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.3390\/cancers15184556"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-022-04807-7"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-7-3"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1016\/j.csda.2022.107436"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-018-2400-2"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2023.1199087"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.3390\/biom12121839"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1109\/TNNLS.2020.2978386"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty294"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM47256.2019.8983228"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.48550\/ARXIV.1609.02907"},{"key":"ref15","article-title":"Graph attention networks","author":"Veli\u010d kovi\u0107","year":"2017","journal-title":"arXiv:1710.10903"},{"key":"ref16","first-page":"1","article-title":"Graph transformer networks","volume-title":"Proc. Adv. Neural Inf. Process. Syst.","volume":"32","author":"Yun"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.3390\/bioengineering10020173"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1038\/s41416-024-02706-7"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btae523"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2024.1363896"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-023-05622-4"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.3389\/fphy.2020.00203"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1038\/s42256-021-00325-y"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.20935\/AcadBiol7325"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1109\/JBHI.2023.3284794"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btad643"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac080"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1145\/3459930.3469542"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-021-23774-w"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbab432"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1016\/j.ailsci.2021.100019"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/bfgp\/elad013"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1142\/9789811250477_0034"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-024-09985-7"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2021.104481"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1186\/s40537-023-00876-4"},{"key":"ref37","article-title":"GraphFM: A scalable framework for multi-graph pretraining","author":"Lachi","year":"2024","journal-title":"arXiv:2407.11907"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM58861.2023.10385953"},{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2023.107371"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1038\/ng.2764"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv1507"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp616"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkv007"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1111\/j.2517-6161.1996.tb02080.x"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2013-14-9-r95"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1186\/s13148-023-01470-4"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-14-293"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0910140107"},{"key":"ref49","article-title":"Graph representation learning strategies for omics data: A case study on Parkinson\u2019s disease","author":"G\u00f3mez de Lope","year":"2024","journal-title":"arXiv:2406.14442"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky1131"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.3390\/life12050650"},{"key":"ref52","doi-asserted-by":"publisher","DOI":"10.1042\/EBC20200108"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-023-34524-x"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkaa1074"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.3390\/fi16090318"},{"key":"ref56","first-page":"1","article-title":"Watch your step: Learning node embeddings via graph attention","volume-title":"Proc. Adv. Neural Inf. Process. Syst.","volume":"31","author":"Abu-El-Haija"},{"key":"ref57","doi-asserted-by":"publisher","DOI":"10.1145\/3308558.3313562"},{"key":"ref58","doi-asserted-by":"publisher","DOI":"10.1186\/s12920-020-0677-2"}],"container-title":["IEEE Access"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/6287639\/10820123\/10879447.pdf?arnumber=10879447","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,3,6]],"date-time":"2025-03-06T06:04:43Z","timestamp":1741241083000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10879447\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025]]},"references-count":58,"URL":"https:\/\/doi.org\/10.1109\/access.2025.3540769","relation":{},"ISSN":["2169-3536"],"issn-type":[{"value":"2169-3536","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025]]}}}