{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,5,3]],"date-time":"2025-05-03T23:06:10Z","timestamp":1746313570902},"reference-count":16,"publisher":"IEEE","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017,11]]},"DOI":"10.1109\/bibm.2017.8217699","type":"proceedings-article","created":{"date-parts":[[2017,12,21]],"date-time":"2017-12-21T17:07:41Z","timestamp":1513876061000},"page":"510-515","source":"Crossref","is-referenced-by-count":5,"title":["GPU accelerated API for alignment of genomics sequencing data"],"prefix":"10.1109","author":[{"given":"Nauman","family":"Ahmed","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hamid","family":"Mushtaq","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Koen","family":"Bertels","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zaid","family":"Al-Ars","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-14-117"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1186\/1756-0500-4-261"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-12-181"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1002\/cpe.3371"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btl582"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-0930-z"},{"journal-title":"Wgsim","year":"0","key":"ref16"},{"journal-title":"Generating a Genome Assembly with PCAP","year":"2002","author":"huang","key":"ref4"},{"journal-title":"Novoalign","year":"0","key":"ref3"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr170"},{"journal-title":"Assembling Genomic DNA Sequences with PHRAP","year":"2002","author":"de la bastide","key":"ref5"},{"journal-title":"GASAL","year":"2017","author":"ahmed","key":"ref8"},{"journal-title":"NVBIO","year":"2015","author":"pantaleoni","key":"ref7"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1923"},{"journal-title":"DNA Sequencing Costs Data from the NHGRI Genome Sequencing Program (GSP)","year":"2016","author":"wetterstrand","key":"ref1"},{"key":"ref9","first-page":"188","author":"liu","year":"2006","journal-title":"GPU Accelerated Smith-Waterman"}],"event":{"name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","start":{"date-parts":[[2017,11,13]]},"location":"Kansas City, MO","end":{"date-parts":[[2017,11,16]]}},"container-title":["2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8169618\/8217602\/08217699.pdf?arnumber=8217699","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,1,29]],"date-time":"2018-01-29T17:13:57Z","timestamp":1517246037000},"score":1,"resource":{"primary":{"URL":"http:\/\/ieeexplore.ieee.org\/document\/8217699\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,11]]},"references-count":16,"URL":"https:\/\/doi.org\/10.1109\/bibm.2017.8217699","relation":{},"subject":[],"published":{"date-parts":[[2017,11]]}}}