{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,26]],"date-time":"2025-10-26T22:53:21Z","timestamp":1761519201918,"version":"3.28.0"},"reference-count":38,"publisher":"IEEE","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2017,11]]},"DOI":"10.1109\/bibm.2017.8217840","type":"proceedings-article","created":{"date-parts":[[2017,12,21]],"date-time":"2017-12-21T17:07:41Z","timestamp":1513876061000},"page":"1262-1269","source":"Crossref","is-referenced-by-count":3,"title":["Auditing the assignments of top-level semantic types in the UMLS semantic network to UMLS concepts"],"prefix":"10.1109","author":[{"given":"Zhe","family":"He","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yehoshua","family":"Perl","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gai","family":"Elhanan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yan","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"James","family":"Geller","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiang","family":"Bian","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"journal-title":"The UMLS Semantic Network","year":"0","key":"ref38"},{"key":"ref33","first-page":"790","article-title":"Reproducibility of interpreting &#x201C;and&#x201D; and &#x201C;or&#x201D; in terminology systems","author":"mendonca","year":"1998","journal-title":"Proc AMIA Symp"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1016\/j.artmed.2011.05.003"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2011.08.021"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1197\/jamia.M2951"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2012.09.007"},{"key":"ref36","first-page":"612","article-title":"Auditing the UMLS for redundant classifications","author":"peng","year":"2002","journal-title":"Proc AMIA Symp"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2009.01.006"},{"key":"ref34","first-page":"193","article-title":"Comparing inconsistent relationship configurations indicating UMLS errors","volume":"2009","author":"geller","year":"2009","journal-title":"AMIA Annu Symp Proc"},{"key":"ref10","first-page":"20","article-title":"Biodynamic ontology: applying BFO in the biomedical domain","volume":"102","author":"grenon","year":"2004","journal-title":"Stud Health Technol Inform"},{"key":"ref11","first-page":"1225","article-title":"Towards a top-domain ontology for linking biomedical ontologies","volume":"129","author":"stenzhorn","year":"2007","journal-title":"Stud Health Technol Inform"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2008.08.006"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2009.03.003"},{"key":"ref14","first-page":"232","article-title":"Longitudinal analysis of new information types in clinical notes","volume":"2014","author":"zhang","year":"2014","journal-title":"AMIA Summits Transl Sci Proc"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2012-001317"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2016.09.002"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2011-000321"},{"key":"ref18","first-page":"57","article-title":"Circular hierarchical relationships in the UMLS: etiology, diagnosis, treatment, complications and prevention","author":"bodenreider","year":"2001","journal-title":"Proc AMIA Symp"},{"key":"ref19","first-page":"550","article-title":"Approaches to eliminating cycles in the UMLS Metathesaurus: naive vs. formal","author":"mougin","year":"2005","journal-title":"AMIA Annu Symp Proc"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1197\/jamia.M2951"},{"key":"ref4","first-page":"170","article-title":"The UMLS project: making the conceptual connection between users and the information they need","volume":"81","author":"humphreys","year":"1993","journal-title":"Bull Med Libr Assoc"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1016\/j.artmed.2004.02.002"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"281","DOI":"10.1055\/s-0038-1634945","article-title":"The Unified Medical Language System","volume":"32","author":"lindberg","year":"1993","journal-title":"Methods Inf Med"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1055\/s-0038-1634592","article-title":"The representation of meaning in the UMLS","volume":"34","author":"mccray","year":"1995","journal-title":"Methods Inf Med"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1186\/1758-2946-4-9"},{"key":"ref5","first-page":"78","article-title":"Assessing and enhancing the value of the UMLS Knowledge Sources","author":"humphreys","year":"1991","journal-title":"Proc Annu Symp Comput Appl Med Care"},{"key":"ref8","article-title":"Distinction, Combinations and Constraints","author":"sowa","year":"1995","journal-title":"Proceedings of the Workshop on Basic Ontological Issues in Knowledge Sharing"},{"key":"ref7","article-title":"The scope and structure of the first version of the UMLS Semantic Network","author":"mccray","year":"1990","journal-title":"Proc Annu Symp Comput Appl Med Care"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1136\/jamia.1998.0050001"},{"key":"ref9","first-page":"53","article-title":"The state of the art in ontology design: A survey and comparative review","author":"noy","year":"1997","journal-title":"AI Magazine"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkh061"},{"key":"ref20","first-page":"529","article-title":"Auditing hierarchical cycles to locate other inconsistencies in the UMLS","volume":"2011","author":"halper","year":"2011","journal-title":"AMIA Annu Symp Proc"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2012.05.006"},{"key":"ref21","first-page":"294","article-title":"Evaluation of a UMLS Auditing Process of Semantic Type Assignments","author":"gu","year":"2007","journal-title":"AMIA Annu Symp Proc"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1016\/S0169-023X(02)00153-2"},{"key":"ref23","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1136\/jamia.2000.0070066","article-title":"Representing the UMLS as an object-oriented database: modeling issues and advantages","volume":"7","author":"gu","year":"2000","journal-title":"J Am Med Inform Assoc"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1197\/jamia.M2604"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.5210\/ojphi.v6i2.5412"}],"event":{"name":"2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","start":{"date-parts":[[2017,11,13]]},"location":"Kansas City, MO","end":{"date-parts":[[2017,11,16]]}},"container-title":["2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8169618\/8217602\/08217840.pdf?arnumber=8217840","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,25]],"date-time":"2022-01-25T16:19:48Z","timestamp":1643127588000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8217840\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,11]]},"references-count":38,"URL":"https:\/\/doi.org\/10.1109\/bibm.2017.8217840","relation":{},"subject":[],"published":{"date-parts":[[2017,11]]}}}