{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,14]],"date-time":"2025-11-14T17:25:51Z","timestamp":1763141151267,"version":"3.28.0"},"reference-count":47,"publisher":"IEEE","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,12]]},"DOI":"10.1109\/bibm.2018.8621269","type":"proceedings-article","created":{"date-parts":[[2019,2,28]],"date-time":"2019-02-28T22:32:01Z","timestamp":1551393121000},"page":"1310-1317","source":"Crossref","is-referenced-by-count":3,"title":["Annotating Cohort Data Elements with OHDSI Common Data Model to Promote Research Reproducibility"],"prefix":"10.1109","author":[{"given":"Yiqing","family":"Zhao","sequence":"first","affiliation":[]},{"given":"Yanshan","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Henry","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Benjamin","family":"Yan","sequence":"additional","affiliation":[]},{"given":"Feichen","family":"Shen","sequence":"additional","affiliation":[]},{"given":"Kevin J.","family":"Peterson","sequence":"additional","affiliation":[]},{"given":"Walter A.","family":"Rocca","sequence":"additional","affiliation":[]},{"given":"Jennifer St.","family":"Sauver","sequence":"additional","affiliation":[]},{"given":"Hongfang","family":"Liu","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1016\/j.mayocp.2012.01.010"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1161\/01.CIR.88.1.107"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1093\/aje\/kwg078"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1164\/ajrccm\/146.4.888"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1212\/WNL.52.6.1214"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1093\/aje\/kwq482"},{"key":"ref37","first-page":"69","article-title":"Semantic MEDLINE: a web application for managing the results of PubMed Searches","author":"kilicoglu","year":"2008","journal-title":"Proceedings of the Third International Symposium for Semantic Mining in Biomedicine"},{"journal-title":"OHDSI CommonDataModel wiki","year":"2018","author":"reich","key":"ref36"},{"key":"ref35","article-title":"Title","author":"liu","year":"0","journal-title":"unpublished"},{"key":"ref34","first-page":"819834","article-title":"Rochester Epidemiology Project: a unique resource for research in the rheumatic diseases","volume":"30","author":"kremers","year":"2004","journal-title":"Rheumatic Disease Clinics of North America"},{"key":"ref10","first-page":"172","article-title":"An i2b2-based, generalizable, open source, self-scaling chronic disease registry","volume":"20","author":"natter","year":"2013","journal-title":"The American Journal of Medicine"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1016\/j.mayocp.2013.09.014"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2014-002751"},{"key":"ref12","article-title":"The FAIR Guiding Principles for scientific data management and stewardship","volume":"3","author":"wilkinson","year":"2016","journal-title":"The Scientific Database"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijsu.2014.07.013"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2011-000492"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2014-002747"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.7326\/0003-4819-153-9-201011020-00010"},{"key":"ref17","first-page":"326","article-title":"HL7 FHIR: An Agile and RESTful approach to healthcare information exchange","author":"bender","year":"2013","journal-title":"Computer-Based Medical Systems (CBMS) 2013 IEEE 26th International Symposium on"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2011-000321"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2008.12.013"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1016\/j.mayocp.2012.08.012"},{"key":"ref4","first-page":"432","article-title":"Study design, exposure variables, and socioeconomic determinants of participation in Diet, Cancer and Health: a population-based prospective cohort study of 57,053 men and women in Denmark","volume":"35","author":"tj\u00f8nneland","year":"2007","journal-title":"Scandinavian Journal of Social Medicine"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1007\/s40264-015-0297-5"},{"key":"ref3","first-page":"532","article-title":"Modeling and executing electronic health records driven phenotyping algorithms using the NQF Quality Data Model and JBoss&#x00AE; Drools engine","author":"li","year":"2012","journal-title":"AMIA Annual Symposium Proceedings"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1053\/j.ajkd.2015.11.008"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1093\/ije\/dys195"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1034\/j.1399-3038.13.s.15.1.x"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/jamia\/ocv112"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2014-002727"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2010-000061"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0055811"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2013-001939"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1007\/s40264-012-0009-3"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1007\/3-540-39967-4_2","article-title":"The knowledge model of Protege-2000: Combining interoperability and flexibility","author":"noy","year":"2000","journal-title":"Knowledge Engineering and Knowledge Management Methods Models and Tools"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1002\/art.1780310302"},{"key":"ref22","article-title":"The DARTNet Institute: seeking a sustainable support mechanism for electronic data enabled research networks","volume":"2","author":"pace","year":"2014","journal-title":"EGEM"},{"key":"ref47","article-title":"Transforming the Premier Perspective&#x00AE; Hospital Database into the Observational Medical Outcomes Partnership (OMOP) Common Data Model","volume":"2","author":"makadia","year":"2014","journal-title":"EGEM"},{"key":"ref21","first-page":"574","article-title":"Observational Health Data Sciences and Informatics (OHDSI):opportunities for observational researchers","volume":"216","author":"hripcsak","year":"2015","journal-title":"Studies in Health Technology and Informatics"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1111\/pde.12621"},{"key":"ref24","article-title":"01-BD2K ThinkTank on EHR data semantic harmonization, definition, content, ontologies: OHDSI, CDRNs, NLP","author":"hripcsak","year":"2007","journal-title":"Health Sciences Library Photograph Collection and Special Collections"},{"key":"ref41","doi-asserted-by":"crossref","first-page":"1555","DOI":"10.1016\/j.mayocp.2016.06.028","article-title":"Increasing Incidence of Melanoma in the Elderly: An Epidemiological Study in Olmsted County, Minnesota","author":"lourido","year":"2016","journal-title":"Mayo Clinic Proceedings"},{"key":"ref23","article-title":"Establishing Interoperability Standards between OMOP CDM v4, v5, and PCORnet CDM v1","author":"belenkaya","year":"2015","journal-title":"OHDSI workshop"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtho.2015.10.016"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1002\/sim.5620"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1002\/art.39542"},{"key":"ref25","first-page":"449","article-title":"Generating typed dependency parses from phrase structure parses","author":"de marneffe","year":"2006","journal-title":"Proceedings of LREC"}],"event":{"name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","start":{"date-parts":[[2018,12,3]]},"location":"Madrid, Spain","end":{"date-parts":[[2018,12,6]]}},"container-title":["2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8609864\/8621069\/08621269.pdf?arnumber=8621269","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,8,24]],"date-time":"2020-08-24T05:44:54Z","timestamp":1598247894000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8621269\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,12]]},"references-count":47,"URL":"https:\/\/doi.org\/10.1109\/bibm.2018.8621269","relation":{},"subject":[],"published":{"date-parts":[[2018,12]]}}}