{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,10,29]],"date-time":"2024-10-29T11:08:14Z","timestamp":1730200094233,"version":"3.28.0"},"reference-count":18,"publisher":"IEEE","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,12]]},"DOI":"10.1109\/bibm.2018.8621495","type":"proceedings-article","created":{"date-parts":[[2019,2,28]],"date-time":"2019-02-28T22:32:01Z","timestamp":1551393121000},"page":"1343-1350","source":"Crossref","is-referenced-by-count":1,"title":["CloudGT: A High Performance Genome Analysis Toolkit Leveraging Pipeline Optimization on Spark"],"prefix":"10.1109","author":[{"given":"Anghong","family":"Xiao","sequence":"first","affiliation":[]},{"given":"Shoubin","family":"Dong","sequence":"additional","affiliation":[]},{"given":"Cheng","family":"Liu","sequence":"additional","affiliation":[]},{"given":"Lingqi","family":"Zhang","sequence":"additional","affiliation":[]},{"given":"Zongze","family":"Wu","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0577-x"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2015.7359893"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1145\/3107411.3107438"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2016.7822584"},{"key":"ref14","first-page":"747","article-title":"Accelerating large-scale genomic analysis with Spark","author":"li","year":"2016","journal-title":"Bioinformatics and Biomedicine (BIBM) 2016 IEEE International Conference on"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks754"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp352"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr330"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1145\/2934664"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-015-0736-4"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1016\/j.is.2014.07.006"},{"journal-title":"Picard tools Java-based command-line utilities for manipulating sam files","year":"0","key":"ref6"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"11","DOI":"10.1002\/0471250953.bi1110s43","article-title":"From fastq data to high-confidence variant calls: the genome analysis toolkit best practices pipeline","volume":"43","author":"auwera","year":"2013","journal-title":"Current Protocols in Bioinformatics"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv179"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp324"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth0710-495"},{"key":"ref1","doi-asserted-by":"crossref","first-page":"198","DOI":"10.1038\/nature09796","article-title":"A decade’s perspective on DNA sequencing technology","volume":"470","author":"mardis","year":"2011","journal-title":"Nature"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2015.7359781"}],"event":{"name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","start":{"date-parts":[[2018,12,3]]},"location":"Madrid, Spain","end":{"date-parts":[[2018,12,6]]}},"container-title":["2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8609864\/8621069\/08621495.pdf?arnumber=8621495","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,8,23]],"date-time":"2020-08-23T22:27:07Z","timestamp":1598221627000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8621495\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,12]]},"references-count":18,"URL":"https:\/\/doi.org\/10.1109\/bibm.2018.8621495","relation":{},"subject":[],"published":{"date-parts":[[2018,12]]}}}