{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,12]],"date-time":"2026-03-12T00:34:20Z","timestamp":1773275660074,"version":"3.50.1"},"reference-count":34,"publisher":"IEEE","license":[{"start":{"date-parts":[[2018,12,1]],"date-time":"2018-12-01T00:00:00Z","timestamp":1543622400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2018,12,1]],"date-time":"2018-12-01T00:00:00Z","timestamp":1543622400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,12]]},"DOI":"10.1109\/bibm.2018.8621555","type":"proceedings-article","created":{"date-parts":[[2019,2,28]],"date-time":"2019-02-28T22:32:01Z","timestamp":1551393121000},"page":"227-233","source":"Crossref","is-referenced-by-count":1,"title":["Fast variation-aware read alignment with deBGA-VARA"],"prefix":"10.1109","author":[{"given":"Hongzhe","family":"Guo","sequence":"first","affiliation":[{"name":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bo","family":"Liu","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dengfeng","family":"Guan","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yilei","family":"Fu","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yadong","family":"Wang","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr330"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp352"},{"key":"ref31","article-title":"Aligning sequence reads, clone sequences and assembly contigs with bwa-mem","author":"li","year":"2013","journal-title":"arXiv 1303 3997 [q-bio GN]"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1145\/12130.12152"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-9-11"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3121"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1101\/gad.2037511"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1128\/MMBR.00011-08"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1046\/j.1432-1327.2002.02797.x"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.0010049"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1101\/gr.6981507"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1007\/BF00179291"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3257"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1596"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty183"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1016\/0022-2836(82)90398-9"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-16-S15-P18"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1016\/0022-2836(81)90087-5"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1038\/nrg4005"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1038\/nrg2986"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0082138"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-1216-1"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1038\/nrg2796"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1038\/ng.806"},{"key":"ref2","doi-asserted-by":"crossref","first-page":"68","DOI":"10.1038\/nature15393","article-title":"A global reference for human genetic variation","volume":"526","author":"consortium","year":"2015","journal-title":"Nature"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1038\/nrg3054"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1016\/S0065-2660(08)00601-9"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1101\/gr.107524.110"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1137\/1.9781611974768.2"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-1103-9"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt215"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1109\/SFCS.2000.892127"},{"key":"ref26","doi-asserted-by":"crossref","first-page":"1061","DOI":"10.1038\/nature09534","article-title":"A map of human genome variation from population-scale sequencing","volume":"467","author":"consortium","year":"2010","journal-title":"Nature"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.4227"}],"event":{"name":"2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","location":"Madrid, Spain","start":{"date-parts":[[2018,12,3]]},"end":{"date-parts":[[2018,12,6]]}},"container-title":["2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8609864\/8621069\/08621555.pdf?arnumber=8621555","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,2,12]],"date-time":"2024-02-12T18:53:15Z","timestamp":1707763995000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8621555\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,12]]},"references-count":34,"URL":"https:\/\/doi.org\/10.1109\/bibm.2018.8621555","relation":{},"subject":[],"published":{"date-parts":[[2018,12]]}}}