{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,27]],"date-time":"2026-01-27T22:29:50Z","timestamp":1769552990734,"version":"3.49.0"},"reference-count":32,"publisher":"IEEE","license":[{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,11]]},"DOI":"10.1109\/bibm47256.2019.8983180","type":"proceedings-article","created":{"date-parts":[[2020,2,7]],"date-time":"2020-02-07T02:49:51Z","timestamp":1581043791000},"page":"1907-1914","source":"Crossref","is-referenced-by-count":10,"title":["RNA Transcript Assembly Using Inexact Flows"],"prefix":"10.1109","author":[{"given":"Lucia","family":"Williams","sequence":"first","affiliation":[{"name":"Gianforte School of Computing, Montana State University,Bozeman,USA"}]},{"given":"Gillian","family":"Reynolds","sequence":"additional","affiliation":[{"name":"Gianforte School of Computing, Montana State University,Bozeman,USA"}]},{"given":"Brendan","family":"Mumey","sequence":"additional","affiliation":[{"name":"Gianforte School of Computing, Montana State University,Bozeman,USA"}]}],"member":"263","reference":[{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-016-0956-2"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1038\/nrg2484"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1016\/j.ejor.2006.05.043"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks666"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.4137\/BBI.S28991"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1109\/INFCOM.2012.6195830"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1137\/1.9781611975055.7"},{"key":"ref14","author":"kloster","year":"2017","journal-title":"Toboggan Version 1 0"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/srep21597"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2014-15-6-r86"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.7171\/jbt.16-2704-002"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1038\/nsmb.2942"},{"key":"ref19","first-page":"266445","author":"mcdermaid","year":"2018","journal-title":"GeneQC A quality control tool for gene expression estimation based on RNA-sequencing reads mapping"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-14-S5-S15"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-016-0881-8"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2017.2779509"},{"key":"ref3","author":"berge","year":"1984","journal-title":"Graphs"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.2174\/1389202918666170215125048"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1621"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0085024"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.2722"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1145\/321694.321699"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-03402-w"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-019-2786-5"},{"key":"ref1","year":"0","journal-title":"Google's OR-Tools"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4939-1062-5_9"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1109\/GLOCOMW.2015.7414053"},{"key":"ref21","first-page":"1","article-title":"The minimum road trips problem","author":"micka","year":"0","journal-title":"Fall Workshop on Computational Geometry"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.3122"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1038\/srep25533"},{"key":"ref26","first-page":"123612","author":"shao","year":"2017","journal-title":"Scallop enables accurate assembly of transcripts through phasing-preserving graph decomposition"},{"key":"ref25","author":"shao","year":"0","journal-title":"Catfish"}],"event":{"name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","location":"San Diego, CA, USA","start":{"date-parts":[[2019,11,18]]},"end":{"date-parts":[[2019,11,21]]}},"container-title":["2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8965270\/8982928\/08983180.pdf?arnumber=8983180","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,9,1]],"date-time":"2025-09-01T19:23:48Z","timestamp":1756754628000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8983180\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,11]]},"references-count":32,"URL":"https:\/\/doi.org\/10.1109\/bibm47256.2019.8983180","relation":{},"subject":[],"published":{"date-parts":[[2019,11]]}}}