{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,9,2]],"date-time":"2025-09-02T00:03:56Z","timestamp":1756771436106,"version":"3.44.0"},"reference-count":31,"publisher":"IEEE","license":[{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T00:00:00Z","timestamp":1572566400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2019,11]]},"DOI":"10.1109\/bibm47256.2019.8983268","type":"proceedings-article","created":{"date-parts":[[2020,2,7]],"date-time":"2020-02-07T02:49:51Z","timestamp":1581043791000},"page":"2763-2770","source":"Crossref","is-referenced-by-count":0,"title":["Single-cell RNAseq Imputation Based on Matrix Completion with Side Information"],"prefix":"10.1109","author":[{"given":"Tianyu","family":"Wang","sequence":"first","affiliation":[{"name":"University of Connecticut,Computer Science and Engineering,Storrs,US"}]},{"given":"Sheida","family":"Nabavi","sequence":"additional","affiliation":[{"name":"University of Connecticut,Computer Science and Engineering,Storrs,US"}]}],"member":"263","reference":[{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1007\/BF01908075"},{"key":"ref30","first-page":"2579","article-title":"Visualizing Data using t-SNE","volume":"9","author":"van der maaten","year":"2008","journal-title":"J Mach Learn Res"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-03405-7"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-018-2226-y"},{"key":"ref12","first-page":"111591","author":"van dijk","year":"2017","journal-title":"MAGIC A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-018-0033-z"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2019.00009"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-34688-x"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1007\/s10208-009-9045-5"},{"journal-title":"Improved Neighborhood-based Collaborative Filtering","year":"0","author":"bell","key":"ref17"},{"key":"ref18","article-title":"Matrix Completion with Side Information using Manifold Optimization","author":"mohades","year":"2018","journal-title":"Eess Math"},{"key":"ref19","first-page":"4071","article-title":"A Sparse Interactive Model for Matrix Completion with Side Information","author":"lu","year":"2016","journal-title":"Advances in Neural IInformation Processing Systems"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1016\/j.stem.2015.09.011"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1016\/j.molcel.2017.01.023"},{"key":"ref27","first-page":"1138","volume":"347","author":"zeisel","year":"2015","journal-title":"Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq ? Science"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.2967"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-015-0805-z"},{"journal-title":"Biogrid Database of protein chemical and genetic interactions","year":"0","key":"ref29"},{"key":"ref5","article-title":"netNMF-sc: Leveraging gene-gene interactions for imputation and dimensionality reduction in single-cell expression analysis","author":"elyanow","year":"2019","journal-title":"Genomics preprint"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1145\/3233547.3233590"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-017-1188-0"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nn.4366"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2018.04.017"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku555"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu269"},{"key":"ref22","article-title":"Low-rank Matrix Completion using Alternating Minimization","author":"jain","year":"2012","journal-title":"Cs Math Stat"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1109\/TIT.2010.2044061"},{"key":"ref24","article-title":"Provable Inductive Matrix Completion","author":"jain","year":"2013","journal-title":"Cs Math Stat"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1007\/s12532-012-0044-1"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1038\/nn.3881"},{"key":"ref25","first-page":"-593i","article-title":"Large-scale Multi-label Learning with Missing Labels","volume":"32","author":"yu","year":"2014","journal-title":"Proceedings of the 31st International Conference on International Conference on Machine Learning - Volume 32"}],"event":{"name":"2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","start":{"date-parts":[[2019,11,18]]},"location":"San Diego, CA, USA","end":{"date-parts":[[2019,11,21]]}},"container-title":["2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8965270\/8982928\/08983268.pdf?arnumber=8983268","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,9,1]],"date-time":"2025-09-01T19:23:42Z","timestamp":1756754622000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8983268\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,11]]},"references-count":31,"URL":"https:\/\/doi.org\/10.1109\/bibm47256.2019.8983268","relation":{},"subject":[],"published":{"date-parts":[[2019,11]]}}}