{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,1,12]],"date-time":"2025-01-12T05:09:08Z","timestamp":1736658548246,"version":"3.32.0"},"reference-count":33,"publisher":"IEEE","license":[{"start":{"date-parts":[[2024,12,3]],"date-time":"2024-12-03T00:00:00Z","timestamp":1733184000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2024,12,3]],"date-time":"2024-12-03T00:00:00Z","timestamp":1733184000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/501100001321","name":"National Research Foundation","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001321","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2024,12,3]]},"DOI":"10.1109\/bibm62325.2024.10821938","type":"proceedings-article","created":{"date-parts":[[2025,1,10]],"date-time":"2025-01-10T20:12:45Z","timestamp":1736539965000},"page":"735-742","source":"Crossref","is-referenced-by-count":0,"title":["PretrainedBA: Enhancing Compound-Protein Binding Affinity Prediction Accuracy via Pre-training Large-Scale Interaction Information"],"prefix":"10.1109","author":[{"given":"Sangmin","family":"Seo","sequence":"first","affiliation":[{"name":"Yonsei University,Department of Computer Science,Seoul,Republic of Korea"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Seungyeon","family":"Choi","sequence":"additional","affiliation":[{"name":"Yonsei University,Department of Computer Science,Seoul,Republic of Korea"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hwanhee","family":"Kim","sequence":"additional","affiliation":[{"name":"Yonsei University,Department of Computer Science,Seoul,Republic of Korea"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sanghyun","family":"Park","sequence":"additional","affiliation":[{"name":"Yonsei University,Department of Computer Science,Seoul,Republic of Korea"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/nrd2829"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.biophys.36.040306.132550"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.3389\/fgene.2020.00019"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1038\/nrd3078"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty593"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz111"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbab506"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.3390\/molecules27165114"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1016\/j.cels.2020.03.002"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab294"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbab072"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btad049"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbac272"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.3390\/pharmaceutics14081710"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1186\/s13321-022-00591-x"},{"key":"ref16","doi-asserted-by":"crossref","DOI":"10.26434\/chemrxiv-2023-dngg4","article-title":"Mole-bert: Rethinking pre-training graph neural networks for molecules","author":"Xia","year":"2023"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1107\/S0907444998009378"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks966"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0082138"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.8b00545"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1021\/ci500081m"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1021\/ci4000486"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.5b00337"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1021\/jm061277y"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1186\/s13321-018-0285-8"},{"key":"ref26","first-page":"13260","article-title":"Principal neighbourhood aggregation for graph nets","volume":"33","author":"Corso","year":"2020","journal-title":"Advances in Neural Information Processing Systems"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1016\/j.engappai.2023.107257"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1109\/TPAMI.2021.3095381"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1002\/9781118646106"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa921"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbad145"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1021\/jm300687e"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1155\/2013\/236850"}],"event":{"name":"2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)","start":{"date-parts":[[2024,12,3]]},"location":"Lisbon, Portugal","end":{"date-parts":[[2024,12,6]]}},"container-title":["2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/10821710\/10821711\/10821938.pdf?arnumber=10821938","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,1,11]],"date-time":"2025-01-11T10:12:06Z","timestamp":1736590326000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/10821938\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,12,3]]},"references-count":33,"URL":"https:\/\/doi.org\/10.1109\/bibm62325.2024.10821938","relation":{},"subject":[],"published":{"date-parts":[[2024,12,3]]}}}