{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,1]],"date-time":"2026-04-01T18:13:21Z","timestamp":1775067201980,"version":"3.50.1"},"reference-count":45,"publisher":"IEEE","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2016,12]]},"DOI":"10.1109\/bigdata.2016.7840814","type":"proceedings-article","created":{"date-parts":[[2017,2,7]],"date-time":"2017-02-07T16:46:59Z","timestamp":1486486019000},"page":"1937-1945","source":"Crossref","is-referenced-by-count":45,"title":["Clinical named entity recognition: Challenges and opportunities"],"prefix":"10.1109","author":[{"given":"Srinivasa Rao","family":"Kundeti","sequence":"first","affiliation":[]},{"given":"J","family":"Vijayananda","sequence":"additional","affiliation":[]},{"given":"Srikanth","family":"Mujjiga","sequence":"additional","affiliation":[]},{"given":"M","family":"Kalyan","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref39","author":"bialecki","year":"2012","journal-title":"SIGIR 2012 Workshop on Open Source Information Retrieval"},{"key":"ref38","volume":"198","author":"bishop","year":"2006","journal-title":"Pattern Recognition and Machine Learning"},{"key":"ref33","article-title":"A simple algorithm for identifying abbreviation definitions in biomedical texts","author":"schwartz","year":"2003","journal-title":"Proceedings of the Pacific Symposium on Biocomputing(PSB) University of California"},{"key":"ref32","article-title":"Levenshtein distance, Dictionary of Algorithms and Data Structures","author":"paul e","year":"2008","journal-title":"U S National Institute of Standards and Technology retrieved 3 April 2013"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1109\/DAS.2012.77"},{"key":"ref30","year":"0","journal-title":"High-Performance OCR for Printed English and Fraktur using LSTM Networks"},{"key":"ref37","first-page":"1735","volume":"9","author":"sepp","year":"0","journal-title":"Long Short-term Memory Neural Computation"},{"key":"ref36","first-page":"464","article-title":"A study of abbreviations in MEDLINE abstracts","author":"liu","year":"2002","journal-title":"Proceedings of the AMIA Symposium"},{"key":"ref35","year":"0","journal-title":"RadLex Knowledge Base"},{"key":"ref34","year":"0","journal-title":"UMLS Knowledge Base"},{"key":"ref10","article-title":"DIS-EASES: Text mining and data integration of disease-gene associations","author":"pletscher-frankild","year":"2014","journal-title":"Cold Spring Harbor Labs Journals"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btg1023"},{"key":"ref11","article-title":"Aronson AR. Effective mapping of biomedical text to the UMLS metathesaurus","year":"0","journal-title":"META Program"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1197\/jamia.M1552"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2011-000154"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.3115\/1572306.1572326"},{"key":"ref15","first-page":"279","article-title":"SNOMED-CT: The advanced terminology and coding system for eHealth","volume":"121","author":"bos","year":"2006","journal-title":"Stud Health Technol Inform"},{"key":"ref16","first-page":"42","article-title":"Cascading classifiers for named entity recognition in clinical notes","author":"wang","year":"2009","journal-title":"Workshop on Biomedical Information Extraction"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1136\/jamia.2010.003939"},{"key":"ref18","article-title":"Tensorfiow: Large-scale machine learning on heterogeneous distributed systems","author":"martin","year":"2016","journal-title":"arXiv preprint arXiv 1603 04467"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1136\/amiajnl-2011-000203"},{"key":"ref28","year":"0","journal-title":"OCRoRACT A Sequence Learning OCR System Trained on Isolated Characters"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0108396"},{"key":"ref27","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1075\/li.30.1.03nad","article-title":"A survey of named entity recognition and classification","volume":"30","author":"nadeau","year":"2007","journal-title":"Lingvisticae Investigationes"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1016\/j.csi.2012.09.004"},{"key":"ref6","first-page":"189","article-title":"Evaluating the UMLS as a source of lexical knowledge for medical language processing","author":"friedman","year":"2001","journal-title":"Proc AMIA Symp"},{"key":"ref29","year":"0","journal-title":"A Segmentation-Free Approach for Printed Devanagari Script Recognition"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.1054"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1136\/jamia.2009.001560"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1136\/jamia.2009.002733"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-662-43968-5_16"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt474"},{"key":"ref1","doi-asserted-by":"crossref","first-page":"589","DOI":"10.1016\/j.jbi.2005.11.004","article-title":"Natural Language Processing to Extract Medical Problems from Electronic Clinical Documents: Performance Evaluation","volume":"39","author":"st\u00e9phane","year":"2006","journal-title":"Journal of Biomedical Informatics"},{"key":"ref20","article-title":"Using Neural Embeddings for Diagnostic Inferencing in Clinical Question Answering","author":"sadid a","year":"2015","journal-title":"TREC"},{"key":"ref45","first-page":"102","article-title":"BRAT: a web-based tool for NLP-assisted text annotation","author":"stenetorp","year":"2012","journal-title":"Proceedings of the Demonstrations at the 13th Conference of the European Chapter of the Association for Computational Linguistics (EACL &#x2018;12) Association for Computational Linguistics"},{"key":"ref22","article-title":"Nyu: Description of the Japanese NE System Used For Met-2","author":"sekine","year":"1998","journal-title":"Proceedings of the Fifth Message Understanding Conference"},{"key":"ref21","doi-asserted-by":"crossref","DOI":"10.1007\/s10579-015-9330-7","volume":"50","author":"savkov","year":"2016","journal-title":"Language Resources & Evaluation"},{"key":"ref42","doi-asserted-by":"crossref","first-page":"523","DOI":"10.1007\/s10579-015-9330-7","article-title":"Annotating Patient Clinical Records with Syntactic Chunks and Named Entities","volume":"50","author":"aleksandar","year":"2016","journal-title":"The Harvey Corpus Language Resources and Evaluation"},{"key":"ref24","article-title":"A maximum entropy approach to named entity recognition","author":"borthwick","year":"1999"},{"key":"ref41","year":"0","journal-title":"Solr"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1023\/A:1007558221122"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1038\/sdata.2016.35"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1145\/1014052.1014065"},{"key":"ref43","doi-asserted-by":"crossref","first-page":"301","DOI":"10.1006\/jbin.2001.1029","article-title":"A simple algorithm for identifying negated findings and diseases in discharge summaries","volume":"34","author":"wwl","year":"2001","journal-title":"J Biomed Inform"},{"key":"ref25","first-page":"1185","article-title":"Semi-markov conditional random fields for information extraction","author":"sarawagi","year":"2004","journal-title":"Advances in neural information processing systems"}],"event":{"name":"2016 IEEE International Conference on Big Data (Big Data)","location":"Washington DC,USA","start":{"date-parts":[[2016,12,5]]},"end":{"date-parts":[[2016,12,8]]}},"container-title":["2016 IEEE International Conference on Big Data (Big Data)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/7818133\/7840573\/07840814.pdf?arnumber=7840814","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,9,18]],"date-time":"2019-09-18T07:17:41Z","timestamp":1568791061000},"score":1,"resource":{"primary":{"URL":"http:\/\/ieeexplore.ieee.org\/document\/7840814\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,12]]},"references-count":45,"URL":"https:\/\/doi.org\/10.1109\/bigdata.2016.7840814","relation":{},"subject":[],"published":{"date-parts":[[2016,12]]}}}