{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,2]],"date-time":"2025-10-02T00:33:15Z","timestamp":1759365195626,"version":"build-2065373602"},"reference-count":38,"publisher":"IEEE","license":[{"start":{"date-parts":[[2025,8,20]],"date-time":"2025-08-20T00:00:00Z","timestamp":1755648000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,8,20]],"date-time":"2025-08-20T00:00:00Z","timestamp":1755648000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2025,8,20]]},"DOI":"10.1109\/cibcb66090.2025.11177140","type":"proceedings-article","created":{"date-parts":[[2025,9,30]],"date-time":"2025-09-30T17:36:59Z","timestamp":1759253819000},"page":"1-9","source":"Crossref","is-referenced-by-count":0,"title":["Improving the Efficiency and the Validity of Molecular Transformers"],"prefix":"10.1109","author":[{"given":"Leone","family":"Bacciu","sequence":"first","affiliation":[{"name":"Ca&#x2019; Foscari University of Venice,Department of Environmental Sciences, Informatics and Statistics,Venice,Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Matteo","family":"Grazioso","sequence":"additional","affiliation":[{"name":"Ca&#x2019; Foscari University of Venice,Department of Environmental Sciences, Informatics and Statistics,Venice,Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Silvia","family":"Multari","sequence":"additional","affiliation":[{"name":"Ca&#x2019; Foscari University of Venice,Department of Molecular Sciences and Nanosystems,Venice,Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Francesca","family":"Grisoni","sequence":"additional","affiliation":[{"name":"Eindhoven University of Technology,Department of Biomedical Engineering,Eindhoven,Netherlands"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Angelica","family":"Mazzolari","sequence":"additional","affiliation":[{"name":"University of Milan,Department of Pharmaceutical Sciences,Milan,Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marco S.","family":"Nobile","sequence":"additional","affiliation":[{"name":"Ca&#x2019; Foscari University of Venice,Department of Environmental Sciences, Informatics and Statistics,Venice,Italy"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.3389\/fddsv.2023.1201419"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.3390\/biomedicines12071467"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.3390\/jox11030007"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1002\/3527601473"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1124\/dmd.121.000463"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1016\/j.apsb.2018.04.003"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1016\/j.apsb.2022.03.009"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1021\/ci200542m"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.3390\/ijms241311064"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1021\/acs.chemrestox.0c00224"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1111\/cbdd.13445"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1039\/D0SC02639E"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1021\/ci00057a005"},{"key":"ref14","article-title":"Attention is all you need","author":"Vaswani","year":"2017","journal-title":"Advances in Neural Information Processing Systems"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1109\/CIBCB58642.2024.10702115"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.3389\/fphar.2015.00123"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1002\/cmdc.200800384"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1002\/9783527673261.ch11"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-362"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.1c00203"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1021\/jm050529c"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1007\/s11030-021-10217-3"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1186\/s13321-018-0324-5"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae374"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1021\/ci300261r"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1021\/ci100050t"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.0c00675"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jmedchem.7b01473"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.3390\/molecules26072098"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1109\/TKDE.2009.191"},{"key":"ref31","article-title":"How transferable are features in deep neural networks?","volume":"27","author":"Yosinski","year":"2014","journal-title":"Advances in neural information processing systems"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.18653\/v1\/2020.acl-main.740"},{"article-title":"No parameters left behind: Sensitivity guided adaptive learning rate for training large transformer models","year":"2022","author":"Liang","key":"ref33"},{"article-title":"A multi-encoder frozen-decoder approach for fine-tuning large language models","year":"2025","author":"Dhole","key":"ref34"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1109\/ICMLA55696.2022.00030"},{"article-title":"Memorization in overparameterized autoencoders","year":"2018","author":"Radhakrishnan","key":"ref36"},{"key":"ref37","article-title":"RDKit: Open-source cheminformatics"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1007\/s42979-020-00312-x"}],"event":{"name":"2025 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","start":{"date-parts":[[2025,8,20]]},"location":"Tainan, Taiwan","end":{"date-parts":[[2025,8,22]]}},"container-title":["2025 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/11177003\/11177052\/11177140.pdf?arnumber=11177140","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,1]],"date-time":"2025-10-01T06:07:34Z","timestamp":1759298854000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/11177140\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,8,20]]},"references-count":38,"URL":"https:\/\/doi.org\/10.1109\/cibcb66090.2025.11177140","relation":{},"subject":[],"published":{"date-parts":[[2025,8,20]]}}}