{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,8,30]],"date-time":"2025-08-30T17:17:43Z","timestamp":1756574263765,"version":"3.28.0"},"reference-count":33,"publisher":"IEEE Comput. Soc","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"DOI":"10.1109\/csb.2002.1039337","type":"proceedings-article","created":{"date-parts":[[2003,6,25]],"date-time":"2003-06-25T23:34:26Z","timestamp":1056584066000},"page":"138-147","source":"Crossref","is-referenced-by-count":20,"title":["Fast and sensitive alignment of large genomic sequences"],"prefix":"10.1109","author":[{"given":"M.","family":"Brudno","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"B.","family":"Morgenstern","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1101\/gr.177401"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1016\/S0378-1119(98)00097-3"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1101\/gr.10.4.577"},{"key":"ref30","first-page":"18","article-title":"AGenDA: Gene prediction by comparative sequence analysis","volume":"2","author":"rinner","year":"2002","journal-title":"Silico Biology"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.93.17.9061"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1038\/72635"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1101\/gr.45502"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1101\/gr.153001"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1017\/CBO9780511574931"},{"key":"ref15","first-page":"73","volume":"205","author":"hardison","year":"1998","journal-title":"Locus control regions of mammalian &#x00DF;-globin gene clusters combining phylogenetic analyses and experimental results to gain functional insights Gene"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1145\/360825.360861"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1101\/gr.9.9.815"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.90.12.5873"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1101\/gr.10.8.1115"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.85.8.2444"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1101\/gr.10.7.950"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/18.6.777"},{"key":"ref3","article-title":"The conserved exon method for gene finding","author":"bafna","year":"2000","journal-title":"Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1089\/10665270252935421"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1145\/78973.78977"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1101\/gr.178701"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/27.11.2369"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1101\/gr.6902"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1006\/jmbi.1990.9999"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1145\/367390.367400"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1145\/360825.360855"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/17.suppl_1.S140"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/15.5.426"},{"key":"ref21","first-page":"228","article-title":"Computation and visualization of degenerate repeats in complete genomes","author":"kurtz","year":"2000","journal-title":"Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/15.3.211"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1126\/science.288.5463.136"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.93.22.12098"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1016\/S0893-9659(01)00085-4"}],"event":{"name":"IEEE Computer Society Bioinformatics Conference","acronym":"CSB-02","location":"Stanford, CA, USA"},"container-title":["Proceedings. IEEE Computer Society Bioinformatics Conference"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx5\/8059\/22276\/01039337.pdf?arnumber=1039337","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,3,13]],"date-time":"2017-03-13T22:17:58Z","timestamp":1489443478000},"score":1,"resource":{"primary":{"URL":"http:\/\/ieeexplore.ieee.org\/document\/1039337\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[null]]},"references-count":33,"URL":"https:\/\/doi.org\/10.1109\/csb.2002.1039337","relation":{},"subject":[]}}