{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,4]],"date-time":"2025-11-04T16:05:17Z","timestamp":1762272317390,"version":"3.28.0"},"reference-count":24,"publisher":"IEEE","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018,7]]},"DOI":"10.1109\/iwobi.2018.8464134","type":"proceedings-article","created":{"date-parts":[[2018,9,13]],"date-time":"2018-09-13T17:48:06Z","timestamp":1536860886000},"page":"1-8","source":"Crossref","is-referenced-by-count":1,"title":["Algorithm for History Reconstruction of Viral Recombination Events: Preliminary Results"],"prefix":"10.1109","author":[{"given":"Carlos","family":"Gomez","sequence":"first","affiliation":[]},{"given":"Gabriel","family":"Gonzalez","sequence":"additional","affiliation":[]},{"given":"Esteban","family":"Meneses","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref10","doi-asserted-by":"crossref","first-page":"126","DOI":"10.1007\/BF00182389","article-title":"Analyzing the mosaic structure of genes","volume":"34","author":"smith","year":"1992","journal-title":"Journal of Molecular Evolution"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"13 757","DOI":"10.1073\/pnas.241370698","article-title":"Evaluation of methods for detecting recombination from dna sequences: Computer simulations","volume":"98","author":"posada","year":"2001","journal-title":"Proceedings of the National Academy of Sciences"},{"key":"ref12","doi-asserted-by":"crossref","first-page":"1035","DOI":"10.1534\/genetics.106.068874","article-title":"An exact nonparametric method for inferring mosaic structure in sequence triplets","volume":"176","author":"boni","year":"2007","journal-title":"Genetics"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"218","DOI":"10.1006\/viro.1999.0056","article-title":"Possible emergence of new geminiviruses by frequent recombination","volume":"265","author":"padidam","year":"1999","journal-title":"Virology"},{"key":"ref14","doi-asserted-by":"crossref","first-page":"405","DOI":"10.1093\/oxfordjournals.molbev.a026121","article-title":"Phylogenetic evidence for recombination in dengue virus","volume":"16","author":"holmes","year":"1999","journal-title":"Molecular Biology and Evolution"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"573","DOI":"10.1093\/bioinformatics\/16.7.573","article-title":"Sister-scanning: a monte carlo procedure for assessing signals in recombinant sequences","volume":"16","author":"gibbs","year":"2000","journal-title":"Bioinformatics"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1186\/1471-2148-6-15","article-title":"Phylogenetic identification of lateral genetic transfer events","volume":"6","author":"beiko","year":"2006","journal-title":"BMC Evolutionary Biology"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"326","DOI":"10.1093\/oxfordjournals.molbev.a025929","article-title":"Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences","volume":"15","author":"weiller","year":"1998","journal-title":"Molecular Biology and Evolution"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"126","DOI":"10.1186\/1471-2105-10-126","article-title":"Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning","volume":"10","author":"lemey","year":"2009","journal-title":"BMC Bioinformatics"},{"key":"ref19","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1371\/journal.pone.0002651","article-title":"Phylogenetic detection of recombination with a bayesian prior on the distance between trees","volume":"3","author":"de oliveira martins","year":"2008","journal-title":"PLoS ONE"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"6209","DOI":"10.1128\/JVI.00515-15","article-title":"Interregional coevolution analysis revealing functional and structural interrelatedness between different genomic regions in human mastadenovirus d","volume":"89","author":"gonzalez","year":"2015","journal-title":"Journal of Virology"},{"key":"ref3","doi-asserted-by":"crossref","first-page":"235","DOI":"10.1128\/br.35.3.235-241.1971","article-title":"Expression of animal virus genomes","volume":"35","author":"baltimore","year":"1971","journal-title":"Bacteriol Rev"},{"key":"ref6","doi-asserted-by":"crossref","DOI":"10.1093\/ve\/vev003","article-title":"Rdp4: Detection and analysis of recombination patterns in virus genomes","volume":"1","author":"martin","year":"2015","journal-title":"Virus Evolution"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"617","DOI":"10.1038\/nrmicro2614","article-title":"Why do rna viruses recombine?","volume":"9","author":"simon-loriere","year":"2011","journal-title":"Nat Rev Micro"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"562","DOI":"10.1093\/bioinformatics\/16.6.562","article-title":"Rdp: detection of recombination amongst aligned sequences","volume":"16","author":"martin","year":"2000","journal-title":"Bioinformatics"},{"key":"ref7","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1007\/s00705-015-2642-5","article-title":"Effects of recombination on densovirus phylogeny","volume":"161","author":"martynova","year":"2016","journal-title":"Archives of Virology"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2014.12.022"},{"key":"ref1","doi-asserted-by":"crossref","first-page":"879","DOI":"10.1093\/genetics\/156.2.879","article-title":"Consequences of recombination on traditional phylogenetic analysis","volume":"156","author":"schierup","year":"2000","journal-title":"Genetics"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1089\/aid.1995.11.1423"},{"key":"ref20","doi-asserted-by":"crossref","first-page":"216","DOI":"10.1038\/nrg1020","article-title":"The modern molecular clock","volume":"4","author":"bromham","year":"2003","journal-title":"Nat Rev Genet"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"857","DOI":"10.1534\/genetics.116.193425","article-title":"Inferring ancestral recombination graphs from bacterial genomic data","volume":"205","author":"vaughan","year":"2017","journal-title":"Genetics"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1005071"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkf436"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1534\/genetics.110.120121"}],"event":{"name":"2018 IEEE International Work Conference on Bioinspired Intelligence (IWOBI)","start":{"date-parts":[[2018,7,18]]},"location":"San Carlos","end":{"date-parts":[[2018,7,20]]}},"container-title":["2018 IEEE International Work Conference on Bioinspired Intelligence (IWOBI)"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8451008\/8464128\/08464134.pdf?arnumber=8464134","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,26]],"date-time":"2022-01-26T05:32:57Z","timestamp":1643175177000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/8464134\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,7]]},"references-count":24,"URL":"https:\/\/doi.org\/10.1109\/iwobi.2018.8464134","relation":{},"subject":[],"published":{"date-parts":[[2018,7]]}}}