{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,11]],"date-time":"2026-03-11T23:31:17Z","timestamp":1773271877832,"version":"3.50.1"},"reference-count":51,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"11","license":[{"start":{"date-parts":[[2021,11,1]],"date-time":"2021-11-01T00:00:00Z","timestamp":1635724800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2021,11,1]],"date-time":"2021-11-01T00:00:00Z","timestamp":1635724800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2021,11,1]],"date-time":"2021-11-01T00:00:00Z","timestamp":1635724800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"Department of Computer Science Georgia State University","award":["Startup"],"award-info":[{"award-number":["Startup"]}]},{"name":"the European Unions Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant","award":["872539"],"award-info":[{"award-number":["872539"]}]},{"name":"Universit degli Studi di Milano- Bicocca","award":["2017-ATE-0534"],"award-info":[{"award-number":["2017-ATE-0534"]}]},{"name":"Universit degli Studi di Milano- Bicocca","award":["2018-ATE-0575"],"award-info":[{"award-number":["2018-ATE-0575"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE J. Biomed. Health Inform."],"published-print":{"date-parts":[[2021,11]]},"DOI":"10.1109\/jbhi.2021.3081380","type":"journal-article","created":{"date-parts":[[2021,5,18]],"date-time":"2021-05-18T15:35:02Z","timestamp":1621352102000},"page":"4068-4078","source":"Crossref","is-referenced-by-count":8,"title":["Effective Clustering for Single Cell Sequencing Cancer Data"],"prefix":"10.1109","volume":"25","author":[{"given":"Simone","family":"Ciccolella","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4329-0234","authenticated-orcid":false,"given":"Murray","family":"Patterson","sequence":"additional","affiliation":[]},{"given":"Paola","family":"Bonizzoni","sequence":"additional","affiliation":[]},{"given":"Gianluca","family":"Della Vedova","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-017-1311-2"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3590"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.3867"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-016-0929-9"},{"key":"ref31","first-page":"410","article-title":"V-measure: A conditional entropy-based external cluster evaluation measure","author":"rosenberg","year":"0","journal-title":"Proc 2007 Joint Conf Empirical Methods Natural Language Processing Computational Natural Language Learning (EMNLP-CoNLL)"},{"key":"ref30","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1126\/science.959840","article-title":"The clonal evolution of tumor cell populations","volume":"194","author":"peter","year":"1976","journal-title":"Science"},{"key":"ref37","doi-asserted-by":"crossref","first-page":"395","DOI":"10.1007\/s11222-007-9033-z","article-title":"A tutorial on spectral clustering","volume":"17","author":"von","year":"2007","journal-title":"Statist Comput"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.1126\/science.aai8478"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt641"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1109\/34.868688"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1038\/nature16478"},{"key":"ref27","article-title":"Clustering based identification of SARS-CoV-2 subtypes","author":"melnyk","year":"0","journal-title":"Proc 10th Int Conf Computational Advances Bio Medical Sciences (ICCABS Virtual Conference 2020)"},{"key":"ref29","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1186\/1471-2164-14-S1-S7","article-title":"BayesHammer: Bayesian clustering for error correction in single-cell sequencing","volume":"14","author":"sergey anton","year":"2013","journal-title":"BMC Genomic"},{"key":"ref2","article-title":"Fast unfolding of communities in large networks","volume":"2008","author":"vincent","year":"2008","journal-title":"J Statist Mech"},{"key":"ref1","author":"anderberg","year":"1973","journal-title":"Cluster Analysis for Applications"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1109\/EMBSISC.2016.7508616"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1101\/gr.220707.117"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts480"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-10737-5"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv003"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr208"},{"key":"ref25","first-page":"281","article-title":"Some methods for classification and analysis of multivariate observations","author":"mcqueen","year":"0","journal-title":"Proc Berkeley Symp on Math Statist and Prob"},{"key":"ref50","article-title":"Spectral clustering in scikit-learn","year":"2021"},{"key":"ref51","article-title":"TatSu grammar parser","year":"2021"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"972","DOI":"10.1126\/science.1136800","article-title":"Clustering by passing messages between data points","volume":"315","author":"brendan","year":"2007","journal-title":"Science"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1002\/net.3230210104"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1145\/235968.233324"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-662-44753-6_27"},{"key":"ref13","article-title":"Discrimination and Classification","author":"hand","year":"1981"},{"key":"ref14","first-page":"1","article-title":"A fast clustering algorithm to cluster very large categorical data sets in data mining","author":"huang","year":"0","journal-title":"Proc 8th ACM SIGMOD Workshop Res Issues Data Mining Knowl Discovery"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1023\/A:1009769707641"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1007\/BF01908075"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-016-0936-x"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1080\/01621459.1963.10500845"},{"key":"ref19","first-page":"573","article-title":"Knowledge discovery in databases terminology","author":"klosgen","year":"0","journal-title":"Advances in Knowledge Discovery and Data Mining"},{"key":"ref4","article-title":"Spectral graph theory","volume":"92","author":"chung","year":"1997","journal-title":"CBMS Regional Conf Series"},{"key":"ref3","article-title":"Phylogenetic analysis of metastatic progression in breast cancer using somatic mutations and copy number aberrations","volume":"8","author":"brown","year":"2017","journal-title":"Nature Commun"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-020-03736-7"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa722"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv261"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty589"},{"key":"ref49","year":"2021"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1080\/01621459.1983.10478008"},{"key":"ref46","article-title":"KMeans clustering in scikit-learn","year":"2021"},{"key":"ref45","year":"2021"},{"key":"ref48","year":"2021"},{"key":"ref47","year":"2021"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1145\/581478.581483"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.1145\/982962.964011"},{"key":"ref44","year":"2021"},{"key":"ref43","year":"2021"}],"container-title":["IEEE Journal of Biomedical and Health Informatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/6221020\/9605141\/09435069.pdf?arnumber=9435069","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,5,10]],"date-time":"2022-05-10T10:53:20Z","timestamp":1652180000000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/9435069\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,11]]},"references-count":51,"journal-issue":{"issue":"11"},"URL":"https:\/\/doi.org\/10.1109\/jbhi.2021.3081380","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/586545","asserted-by":"object"}]},"ISSN":["2168-2194","2168-2208"],"issn-type":[{"value":"2168-2194","type":"print"},{"value":"2168-2208","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,11]]}}}