{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,23]],"date-time":"2025-06-23T07:30:04Z","timestamp":1750663804680,"version":"3.37.3"},"reference-count":34,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"6","license":[{"start":{"date-parts":[[2022,6,1]],"date-time":"2022-06-01T00:00:00Z","timestamp":1654041600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2022,6,1]],"date-time":"2022-06-01T00:00:00Z","timestamp":1654041600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2022,6,1]],"date-time":"2022-06-01T00:00:00Z","timestamp":1654041600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["61802334","61902340"],"award-info":[{"award-number":["61802334","61902340"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE J. Biomed. Health Inform."],"published-print":{"date-parts":[[2022,6]]},"DOI":"10.1109\/jbhi.2021.3130897","type":"journal-article","created":{"date-parts":[[2021,11,29]],"date-time":"2021-11-29T20:56:27Z","timestamp":1638219387000},"page":"2447-2457","source":"Crossref","is-referenced-by-count":3,"title":["Particle-Based Calculation and Visualization of Protein Cavities Using SES Models"],"prefix":"10.1109","volume":"26","author":[{"given":"Li","family":"Feng","sequence":"first","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Feng","family":"Wang","sequence":"additional","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jian","family":"Zhang","sequence":"additional","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yong","family":"Tang","sequence":"additional","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jing","family":"Zhao","sequence":"additional","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lisha","family":"Zhou","sequence":"additional","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiayan","family":"Wang","sequence":"additional","affiliation":[{"name":"Yanshan University, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9935-7373","authenticated-orcid":false,"given":"Dongliang","family":"Guo","sequence":"additional","affiliation":[{"name":"Yanshan University and Computer Virtualization Technology and System Integration Laboratory, Hebei, Qinhuangdao, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7359-2068","authenticated-orcid":false,"given":"Amit Kumar","family":"Singh","sequence":"additional","affiliation":[{"name":"IEEE Department of Computer Science &amp; Engineering, National Institute of Technology Patna, Bihar, India"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"doi-asserted-by":"publisher","key":"ref1","DOI":"10.1111\/cgf.12928"},{"doi-asserted-by":"publisher","key":"ref2","DOI":"10.1007\/s12650-020-00646-x"},{"doi-asserted-by":"publisher","key":"ref3","DOI":"10.1186\/1758-2946-5-39"},{"doi-asserted-by":"publisher","key":"ref4","DOI":"10.1016\/0263-7855(92)80074-N"},{"issue":"1","key":"ref5","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1472-6807-6-19","article-title":"Ligsite CSC: Predicting ligand binding sites using the connolly surface and degree of conservation","volume":"6","author":"Huang","year":"2006","journal-title":"BMC Struct. Biol."},{"doi-asserted-by":"publisher","key":"ref6","DOI":"10.1186\/1752-153X-1-7"},{"doi-asserted-by":"publisher","key":"ref7","DOI":"10.1016\/0263-7855(95)00073-9"},{"doi-asserted-by":"publisher","key":"ref8","DOI":"10.1186\/1472-6807-8-49"},{"doi-asserted-by":"publisher","key":"ref9","DOI":"10.1007\/s00894-009-0541-y"},{"doi-asserted-by":"publisher","key":"ref10","DOI":"10.1111\/febs.12611"},{"doi-asserted-by":"publisher","key":"ref11","DOI":"10.1002\/prot.25076"},{"doi-asserted-by":"publisher","key":"ref12","DOI":"10.3389\/fmolb.2020.591381"},{"doi-asserted-by":"publisher","key":"ref13","DOI":"10.1021\/acs.jcim.8b00572"},{"doi-asserted-by":"publisher","key":"ref14","DOI":"10.1186\/s12859-017-1913-4"},{"doi-asserted-by":"publisher","key":"ref15","DOI":"10.1093\/bioinformatics\/btp599"},{"doi-asserted-by":"publisher","key":"ref16","DOI":"10.1093\/nar\/gkq395"},{"doi-asserted-by":"publisher","key":"ref17","DOI":"10.1186\/1471-2105-15-197"},{"doi-asserted-by":"publisher","key":"ref18","DOI":"10.1093\/bioinformatics\/btq672"},{"doi-asserted-by":"publisher","key":"ref19","DOI":"10.1016\/j.future.2016.07.009"},{"key":"ref20","article-title":"A survey on position based dynamics","volume-title":"Proc. Euro. Associat. Comput. Graphics: Tutorials, ser. EG 17. Goslar,","author":"Bender","year":"2017"},{"doi-asserted-by":"publisher","key":"ref21","DOI":"10.1145\/2601097.2601152"},{"doi-asserted-by":"publisher","key":"ref22","DOI":"10.1016\/j.cag.2014.07.004"},{"doi-asserted-by":"publisher","key":"ref23","DOI":"10.1145\/2461912.2461984"},{"doi-asserted-by":"publisher","key":"ref24","DOI":"10.1145\/1531326.1531346"},{"doi-asserted-by":"publisher","key":"ref25","DOI":"10.1002\/cav.1499"},{"issue":"1","key":"ref26","first-page":"82","article-title":"Pymol: An open-source molecular graphics tool","volume":"40","author":"DeLano","year":"2002","journal-title":"CCP4 Newslett. Protein Crystallogr."},{"issue":"1-3","key":"ref27","first-page":"17","article-title":"Ambient occlusion opacity mapping for visualization of internal molecular structure","volume-title":"J. WSCG.","volume":"19","author":"Borland","year":"2011"},{"doi-asserted-by":"publisher","key":"ref28","DOI":"10.1021\/bi001539c"},{"doi-asserted-by":"publisher","key":"ref29","DOI":"10.1006\/jmbi.1993.1549"},{"issue":"2","key":"ref30","first-page":"182","article-title":"Refinement of the spatial structure of the gramicidin A ion channel","volume":"18","author":"Lomize","year":"1992","journal-title":"Bioorganicheskaia Khimiia"},{"doi-asserted-by":"publisher","key":"ref31","DOI":"10.1186\/1471-2105-10-168"},{"doi-asserted-by":"publisher","key":"ref32","DOI":"10.1002\/pro.5560070905"},{"doi-asserted-by":"publisher","key":"ref33","DOI":"10.1023\/A:1008124202956"},{"doi-asserted-by":"publisher","key":"ref34","DOI":"10.1016\/j.cpc.2010.08.032"}],"container-title":["IEEE Journal of Biomedical and Health Informatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/6221020\/9788469\/09627931.pdf?arnumber=9627931","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,3,1]],"date-time":"2024-03-01T19:26:30Z","timestamp":1709321190000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/9627931\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,6]]},"references-count":34,"journal-issue":{"issue":"6"},"URL":"https:\/\/doi.org\/10.1109\/jbhi.2021.3130897","relation":{},"ISSN":["2168-2194","2168-2208"],"issn-type":[{"type":"print","value":"2168-2194"},{"type":"electronic","value":"2168-2208"}],"subject":[],"published":{"date-parts":[[2022,6]]}}}