{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,11]],"date-time":"2026-05-11T20:13:03Z","timestamp":1778530383171,"version":"3.51.4"},"reference-count":48,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"5","license":[{"start":{"date-parts":[[2026,5,1]],"date-time":"2026-05-01T00:00:00Z","timestamp":1777593600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"},{"start":{"date-parts":[[2026,5,1]],"date-time":"2026-05-01T00:00:00Z","timestamp":1777593600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,5,1]],"date-time":"2026-05-01T00:00:00Z","timestamp":1777593600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"}],"funder":[{"name":"Hunan Postgraduate Research and Innovation","award":["CX20240018"],"award-info":[{"award-number":["CX20240018"]}]},{"name":"High Performance Computing Center of Central South University"},{"DOI":"10.13039\/501100004735","name":"Natural Science Foundation of Hunan Province","doi-asserted-by":"publisher","award":["2025JJ30025"],"award-info":[{"award-number":["2025JJ30025"]}],"id":[{"id":"10.13039\/501100004735","id-type":"DOI","asserted-by":"publisher"}]},{"name":"National Key Research and Development Program of China","award":["2023YFF1205500"],"award-info":[{"award-number":["2023YFF1205500"]}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["62225209"],"award-info":[{"award-number":["62225209"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE J. Biomed. Health Inform."],"published-print":{"date-parts":[[2026,5]]},"DOI":"10.1109\/jbhi.2025.3622996","type":"journal-article","created":{"date-parts":[[2025,10,23]],"date-time":"2025-10-23T17:59:38Z","timestamp":1761242378000},"page":"4023-4034","source":"Crossref","is-referenced-by-count":1,"title":["DPGOK: A Deep Learning-Based Method for Protein Function Prediction by Fusing GO Knowledge With Protein Features"],"prefix":"10.1109","volume":"30","author":[{"ORCID":"https:\/\/orcid.org\/0009-0008-5272-0786","authenticated-orcid":false,"given":"Qiurong","family":"Yang","sequence":"first","affiliation":[{"name":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0009-0001-9930-5853","authenticated-orcid":false,"given":"Wenkang","family":"Wang","sequence":"additional","affiliation":[{"name":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7656-445X","authenticated-orcid":false,"given":"Wei","family":"Fan","sequence":"additional","affiliation":[{"name":"Nuffield Department of Women’s and Reproductive Health, University of Oxford, Oxford, U.K."}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6372-6798","authenticated-orcid":false,"given":"Ruiqing","family":"Zheng","sequence":"additional","affiliation":[{"name":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0188-1394","authenticated-orcid":false,"given":"Min","family":"Li","sequence":"additional","affiliation":[{"name":"Hunan Provincial Key Lab on Bioinformatics, School of Computer Science and Engineering, Central South University, Changsha, China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1126\/science.aal3321"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae162"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1145\/3714455"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-021-01143-1"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky1049"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1186\/s12859-019-3076-y"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.5c00062"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.3c01794"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1038\/75556"},{"issue":"5","key":"ref10","first-page":"425","article-title":"The blast sequence analysis tool","volume":"2","author":"Madden","year":"2013","journal-title":"NCBI Handbook"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-021-01101-x"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty130"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btz595"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1109\/TCBB.2021.3130923"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1010793"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbab502"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1109\/TKDE.2023.3331005"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-021-23303-9"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-023-09924-y"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae196"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-024-54816-8"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1007\/s11704-020-8179-0"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btab270"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btab098"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM47256.2019.8983075"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1007\/s10489-022-04387-2"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM55620.2022.9994899"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1515\/hsz-2021-0125"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2018.05.026"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.3390\/jpm12030479"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku1179"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx624"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btab198"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac256"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1038\/s42256-024-00795-w"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.24963\/ijcai.2019\/845"},{"key":"ref37","article-title":"Language models of protein sequences at the scale of evolution enable accurate structure prediction","author":"Lin","year":"2022","journal-title":"BioRxiv"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-019-1835-8"},{"key":"ref39","first-page":"2787","article-title":"Translating embeddings for modeling multi-relational data","volume-title":"Proc. Adv. Neural Inf. Process. Syst.","volume":"26","author":"Bordes","year":"2013"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1609\/aaai.v28i1.8870"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.3115\/v1\/P15-1067"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.26599\/BDMA.2022.9020021"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae050"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/25.17.3389"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbl004"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1000443"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-021-03819-2"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btae655"}],"container-title":["IEEE Journal of Biomedical and Health Informatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx8\/6221020\/11511349\/11215895.pdf?arnumber=11215895","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,5,11]],"date-time":"2026-05-11T19:47:32Z","timestamp":1778528852000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/11215895\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,5]]},"references-count":48,"journal-issue":{"issue":"5"},"URL":"https:\/\/doi.org\/10.1109\/jbhi.2025.3622996","relation":{},"ISSN":["2168-2194","2168-2208"],"issn-type":[{"value":"2168-2194","type":"print"},{"value":"2168-2208","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,5]]}}}