{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2022,3,30]],"date-time":"2022-03-30T00:25:52Z","timestamp":1648599952653},"reference-count":42,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"2","license":[{"start":{"date-parts":[[2015,3,1]],"date-time":"2015-03-01T00:00:00Z","timestamp":1425168000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"}],"funder":[{"name":"Baylor University Research Committee and the Vice Provost for Research"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2015,3]]},"DOI":"10.1109\/tcbb.2014.2355216","type":"journal-article","created":{"date-parts":[[2014,9,17]],"date-time":"2014-09-17T01:55:42Z","timestamp":1410918942000},"page":"309-321","source":"Crossref","is-referenced-by-count":5,"title":["P-Finder: Reconstruction of Signaling Networks from Protein-Protein Interactions and GO Annotations"],"prefix":"10.1109","volume":"12","author":[{"given":"Young-Rae","family":"Cho","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yanan","family":"Xin","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Greg","family":"Speegle","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"263","reference":[{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btm195"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-9-S5-S4"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-9-327"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-588"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbr066"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-290"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btm087"},{"key":"ref36","first-page":"296","article-title":"An information-theoretic definition of similarity","author":"lin","year":"0","journal-title":"Proc 15th Int Conf Mach Learn"},{"key":"ref35","first-page":"448","article-title":"Using information content to evaluate semantic similarity in a taxonomy","author":"resnik","year":"0","journal-title":"Proc 14th Int Joint Conf Artif Intell"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1186\/2041-1480-2-3"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btg153"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr988"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1186\/1477-5956-11-S1-S3"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2013.6732602"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"824","DOI":"10.1126\/science.298.5594.824","article-title":"Network motifs: Simple building blocks of complex networks","volume":"298","author":"milo","year":"2002","journal-title":"Science"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1109\/BIBM.2013.6732475"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkq1116"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkq973"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkp878"},{"key":"ref18","doi-asserted-by":"crossref","first-page":"559d","DOI":"10.1093\/nar\/gkr1028","article-title":"The Gene Ontology: Enhancements for 2011","volume":"40","year":"2012","journal-title":"Nucleic Acids Res"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkr954"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-562"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-3-34"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbr033"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1186\/1752-0509-6-29"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2006.13.133"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1000443"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-5-158"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkq1207"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkn145"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1038\/nrg2750"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-335"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/nrm1570"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1038\/ng881"},{"key":"ref22","doi-asserted-by":"crossref","first-page":"30","DOI":"10.1109\/TITB.2009.2028234","article-title":"Predicting function by frequent functional association pattern mining in protein interaction networks","volume":"14","author":"cho","year":"2010","journal-title":"IEEE Trans Inf Technol Biomed"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1038\/ng1242"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq430"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bti556"},{"key":"ref41","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1007\/978-1-84800-155-8_7","article-title":"Graph implementations for nonsmooth convex programs","author":"grant","year":"2008","journal-title":"Recent Advances in Learning and Control—Lecture Notes in Control and Information Sciences"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bth163"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-10-318"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btl038"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/7080960\/06893026.pdf?arnumber=6893026","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,12]],"date-time":"2022-01-12T16:42:21Z","timestamp":1642005741000},"score":1,"resource":{"primary":{"URL":"http:\/\/ieeexplore.ieee.org\/document\/6893026\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,3]]},"references-count":42,"journal-issue":{"issue":"2"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2014.2355216","relation":{},"ISSN":["1545-5963"],"issn-type":[{"value":"1545-5963","type":"print"}],"subject":[],"published":{"date-parts":[[2015,3]]}}}