{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,8]],"date-time":"2025-10-08T15:37:31Z","timestamp":1759937851335,"version":"3.37.3"},"reference-count":24,"publisher":"Institute of Electrical and Electronics Engineers (IEEE)","issue":"6","license":[{"start":{"date-parts":[[2015,11,1]],"date-time":"2015-11-01T00:00:00Z","timestamp":1446336000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/ieeexplore.ieee.org\/Xplorehelp\/downloads\/license-information\/IEEE.html"}],"funder":[{"DOI":"10.13039\/100004807","name":"German Research Foundation","doi-asserted-by":"publisher","award":["MI439\/14-1"],"award-info":[{"award-number":["MI439\/14-1"]}],"id":[{"id":"10.13039\/100004807","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IEEE\/ACM Trans. Comput. Biol. and Bioinf."],"published-print":{"date-parts":[[2015,11,1]]},"DOI":"10.1109\/tcbb.2015.2430336","type":"journal-article","created":{"date-parts":[[2015,5,6]],"date-time":"2015-05-06T18:47:42Z","timestamp":1430938062000},"page":"1227-1235","source":"Crossref","is-referenced-by-count":16,"title":["Cophylogenetic Reconciliation with ILP"],"prefix":"10.1109","volume":"12","author":[{"given":"Nicolas","family":"Wieseke","sequence":"first","affiliation":[]},{"given":"Tom","family":"Hartmann","sequence":"additional","affiliation":[]},{"given":"Matthias","family":"Bernt","sequence":"additional","affiliation":[]},{"given":"Martin","family":"Middendorf","sequence":"additional","affiliation":[]}],"member":"263","reference":[{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1016\/j.thbio.2005.01.003"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-S1-S60"},{"key":"ref12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts225"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts386"},{"key":"ref14","doi-asserted-by":"publisher","DOI":"10.1186\/1748-7188-5-16"},{"article-title":"An integer linear programming formulation of the cophylogeny reconstruction problem","year":"2008","author":"libeskind-hadas","key":"ref15"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1146\/annurev.es.13.110182.001035"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0061048"},{"article-title":"Evaluation of host parasite reconciliation methods using a new approach for cophylogeny generation","year":"2011","author":"keller-schmidt","key":"ref18"},{"key":"ref19","article-title":"An age dependent branching model for macroevolution","author":"keller-schmidt","year":"2013","journal-title":"arXiv 1012 3298v2"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/28.2.132"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0402591101"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2009.0240"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1016\/S0025-5564(97)10012-8"},{"key":"ref8","first-page":"200","author":"wieseke","year":"0","journal-title":"Unifying Parsimonious Tree Reconciliation"},{"key":"ref7","doi-asserted-by":"publisher","DOI":"10.2307\/2992354"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1016\/S0169-5347(98)01438-4"},{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.1038\/332258a0"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-16181-0_9"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/sysbio\/45.2.151"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1101\/gr.161968.113"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1101\/gr.123901.111"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.2307\/2413694"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.1016\/j.tree.2009.01.009"}],"container-title":["IEEE\/ACM Transactions on Computational Biology and Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/8857\/7348917\/07103015.pdf?arnumber=7103015","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,12]],"date-time":"2022-01-12T15:57:12Z","timestamp":1642003032000},"score":1,"resource":{"primary":{"URL":"http:\/\/ieeexplore.ieee.org\/document\/7103015\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,11,1]]},"references-count":24,"journal-issue":{"issue":"6"},"URL":"https:\/\/doi.org\/10.1109\/tcbb.2015.2430336","relation":{},"ISSN":["1545-5963"],"issn-type":[{"type":"print","value":"1545-5963"}],"subject":[],"published":{"date-parts":[[2015,11,1]]}}}